RNA–Protein interactions for RNA: ENST00000580498.5

SMG8-204, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 5

Gene SMG8, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-204ENST00000580498 HOXA3O43365 443 aaPredicted RBP16.62■□□□□ 0.25
SMG8-204ENST00000580498 CYB5AP00167 134 aa16.62■□□□□ 0.25
SMG8-204ENST00000580498 CCL1P22362 96 aa16.62■□□□□ 0.25
SMG8-204ENST00000580498 SNRPGP62308 76 aaKnown RBP16.62■□□□□ 0.25
SMG8-204ENST00000580498 ACTA2P62736 377 aa16.62■□□□□ 0.25
SMG8-204ENST00000580498 ACTG2P63267 376 aa16.62■□□□□ 0.25
SMG8-204ENST00000580498 CNN3Q15417 329 aaKnown RBP16.62■□□□□ 0.25
SMG8-204ENST00000580498 ZIK1Q3SY52 487 aaPredicted RBP16.62■□□□□ 0.25
SMG8-204ENST00000580498 SLC25A30Q5SVS4 291 aa16.62■□□□□ 0.25
SMG8-204ENST00000580498 TMEM244Q5VVB8 128 aa16.62■□□□□ 0.25
SMG8-204ENST00000580498 TMEM42Q69YG0 159 aa16.62■□□□□ 0.25
SMG8-204ENST00000580498 FIP1L1Q6UN15 594 aaKnown RBP16.62■□□□□ 0.25
SMG8-204ENST00000580498 CBR4Q8N4T8 237 aa16.62■□□□□ 0.25
SMG8-204ENST00000580498 ZNF561Q8N587 486 aa16.62■□□□□ 0.25
SMG8-204ENST00000580498 LY6G5BQ8NDX9 201 aa16.62■□□□□ 0.25
SMG8-204ENST00000580498 SGMS2Q8NHU3 365 aa16.62■□□□□ 0.25
SMG8-204ENST00000580498 C8orf46Q8TAG6 207 aa16.62■□□□□ 0.25
SMG8-204ENST00000580498 RNFT2Q96EX2 444 aa16.62■□□□□ 0.25
SMG8-204ENST00000580498 DPAGT1Q9H3H5 408 aa16.62■□□□□ 0.25
SMG8-204ENST00000580498 M0R1W7 72 aa16.61■□□□□ 0.25
SMG8-204ENST00000580498 PSG2P11465 335 aa16.61■□□□□ 0.25
SMG8-204ENST00000580498 OCLNQ16625 522 aa16.61■□□□□ 0.25
SMG8-204ENST00000580498 RUSC1-AS1Q66K80 236 aa16.61■□□□□ 0.25
SMG8-204ENST00000580498 METAP1DQ6UB28 335 aaPredicted RBP16.61■□□□□ 0.25
SMG8-204ENST00000580498 Q6YL49 198 aa16.61■□□□□ 0.25
SMG8-204ENST00000580498 ACP7Q6ZNF0 438 aa16.61■□□□□ 0.25
SMG8-204ENST00000580498 ZBTB49Q6ZSB9 765 aa16.61■□□□□ 0.25
SMG8-204ENST00000580498 C1orf122Q6ZSJ8 110 aa16.61■□□□□ 0.25
SMG8-204ENST00000580498 SSX6Q7RTT6 188 aa16.61■□□□□ 0.25
SMG8-204ENST00000580498 PP6455Q8WZ26 134 aa16.61■□□□□ 0.25
SMG8-204ENST00000580498 RORBQ92753 470 aa16.61■□□□□ 0.25
SMG8-204ENST00000580498 PKIBQ9C010 78 aa16.61■□□□□ 0.25
SMG8-204ENST00000580498 FGF23Q9GZV9 251 aaPredicted RBP16.61■□□□□ 0.25
SMG8-204ENST00000580498 PRDM13Q9H4Q3 707 aa16.61■□□□□ 0.25
SMG8-204ENST00000580498 METTL8Q9H825 291 aaKnown RBP16.61■□□□□ 0.25
SMG8-204ENST00000580498 A0A1B0GTI1 187 aa16.6■□□□□ 0.25
SMG8-204ENST00000580498 A0A1B0GUS0 222 aa16.6■□□□□ 0.25
SMG8-204ENST00000580498 A0A1B0GW55 424 aa16.6■□□□□ 0.25
SMG8-204ENST00000580498 FAM230AA0A1W2PPH8 454 aa16.6■□□□□ 0.25
SMG8-204ENST00000580498 PQLC2LA1A4F0 135 aa16.6■□□□□ 0.25
SMG8-204ENST00000580498 H0YAE9 185 aa16.6■□□□□ 0.25
SMG8-204ENST00000580498 H3BNX3 289 aa16.6■□□□□ 0.25
SMG8-204ENST00000580498 NOS1APO75052 506 aaPredicted RBP16.6■□□□□ 0.25
SMG8-204ENST00000580498 PAHP00439 452 aa16.6■□□□□ 0.25
SMG8-204ENST00000580498 HTR1AP08908 422 aa16.6■□□□□ 0.25
SMG8-204ENST00000580498 FBP1P09467 338 aa16.6■□□□□ 0.25
SMG8-204ENST00000580498 DUX4L2P0CJ85 424 aa16.6■□□□□ 0.25
SMG8-204ENST00000580498 DUX4L3P0CJ86 424 aa16.6■□□□□ 0.25
SMG8-204ENST00000580498 DUX4L4P0CJ87 422 aa16.6■□□□□ 0.25
SMG8-204ENST00000580498 DUX4L5P0CJ88 424 aa16.6■□□□□ 0.25
SMG8-204ENST00000580498 DUX4L6P0CJ89 424 aa16.6■□□□□ 0.25
SMG8-204ENST00000580498 DUX4L7P0CJ90 424 aa16.6■□□□□ 0.25
SMG8-204ENST00000580498 PGA5P0DJD9 388 aa16.6■□□□□ 0.25
SMG8-204ENST00000580498 ZNF20P17024 532 aa16.6■□□□□ 0.25
SMG8-204ENST00000580498 FUT6P51993 359 aa16.6■□□□□ 0.25
SMG8-204ENST00000580498 DGUOKQ16854 277 aa16.6■□□□□ 0.25
SMG8-204ENST00000580498 TP53I3Q53FA7 332 aa16.6■□□□□ 0.25
SMG8-204ENST00000580498 DUX4L9Q6RFH8 374 aaPredicted RBP16.6■□□□□ 0.25
SMG8-204ENST00000580498 Q6ZSR3 168 aa16.6■□□□□ 0.25
SMG8-204ENST00000580498 FAM185AQ8N0U4 392 aa16.6■□□□□ 0.25
SMG8-204ENST00000580498 ACBD7Q8N6N7 88 aa16.6■□□□□ 0.25
SMG8-204ENST00000580498 OR5D13Q8NGL4 314 aa16.6■□□□□ 0.25
SMG8-204ENST00000580498 BORCS8Q96FH0 119 aa16.6■□□□□ 0.25
SMG8-204ENST00000580498 SDSLQ96GA7 329 aa16.6■□□□□ 0.25
SMG8-204ENST00000580498 DUX4Q9UBX2 424 aa16.6■□□□□ 0.25
SMG8-204ENST00000580498 FBN3Q75N90 2809 aa16.6■□□□□ 0.25
SMG8-204ENST00000580498 MDFIC2A0A1B0GVS7 189 aa16.59■□□□□ 0.25
SMG8-204ENST00000580498 RFPL4AA6NLU0 287 aa16.59■□□□□ 0.25
SMG8-204ENST00000580498 POM121CA8CG34 1229 aa16.59■□□□□ 0.25
SMG8-204ENST00000580498 RFPL4AL1F8VTS6 287 aa16.59■□□□□ 0.25
SMG8-204ENST00000580498 ENTPD6O75354 484 aa16.59■□□□□ 0.25
SMG8-204ENST00000580498 RPL15P61313 204 aaKnown RBP16.59■□□□□ 0.25
SMG8-204ENST00000580498 IL24Q13007 206 aa16.59■□□□□ 0.25
SMG8-204ENST00000580498 DMRTC1Q5HYR2 192 aa16.59■□□□□ 0.25
SMG8-204ENST00000580498 SHISA2Q6UWI4 295 aa16.59■□□□□ 0.25
SMG8-204ENST00000580498 ZNF555Q8NEP9 628 aa16.59■□□□□ 0.25
SMG8-204ENST00000580498 TRMT10AQ8TBZ6 339 aaKnown RBP16.59■□□□□ 0.25
SMG8-204ENST00000580498 S100A14Q9HCY8 104 aa16.59■□□□□ 0.25
SMG8-204ENST00000580498 SIRT7Q9NRC8 400 aa16.59■□□□□ 0.25
SMG8-204ENST00000580498 TNFRSF19Q9NS68 423 aa16.59■□□□□ 0.25
SMG8-204ENST00000580498 IGKV1D-17A0A075B6S4 117 aa16.58■□□□□ 0.24
SMG8-204ENST00000580498 LOC107986453A0A1B0GWG9 222 aa16.58■□□□□ 0.24
SMG8-204ENST00000580498 A6NIN4 97 aa16.58■□□□□ 0.24
SMG8-204ENST00000580498 SLC16A6O15403 523 aa16.58■□□□□ 0.24
SMG8-204ENST00000580498 BAG2O95816 211 aa16.58■□□□□ 0.24
SMG8-204ENST00000580498 FADS2O95864 444 aaKnown RBP16.58■□□□□ 0.24
SMG8-204ENST00000580498 SELLP14151 372 aa16.58■□□□□ 0.24
SMG8-204ENST00000580498 PRDX2P32119 198 aa16.58■□□□□ 0.24
SMG8-204ENST00000580498 ELF3P78545 371 aaPredicted RBP16.58■□□□□ 0.24
SMG8-204ENST00000580498 MRPL28Q13084 256 aaKnown RBP16.58■□□□□ 0.24
SMG8-204ENST00000580498 PDZD9Q8IXQ8 264 aa16.58■□□□□ 0.24
SMG8-204ENST00000580498 Q8IYB0 196 aa16.58■□□□□ 0.24
SMG8-204ENST00000580498 PQLC1Q8N2U9 271 aa16.58■□□□□ 0.24
SMG8-204ENST00000580498 ZNRF1Q8ND25 227 aa16.58■□□□□ 0.24
SMG8-204ENST00000580498 OR4F5Q8NH21 305 aa16.58■□□□□ 0.24
SMG8-204ENST00000580498 C1orf147Q96MC9 270 aaPredicted RBP16.58■□□□□ 0.24
SMG8-204ENST00000580498 CHST5Q9GZS9 411 aa16.58■□□□□ 0.24
SMG8-204ENST00000580498 OR14J1Q9UGF5 321 aa16.58■□□□□ 0.24
SMG8-204ENST00000580498 SF3B6Q9Y3B4 125 aaKnown RBP16.58■□□□□ 0.24
SMG8-204ENST00000580498 SYNGR1O43759 233 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms