RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 ASCC1Q8N9N2 400 aaKnown RBP10.84□□□□□ -0.67
CSNK1D-213ENST00000580446 TRMT10AQ8TBZ6 339 aaKnown RBP10.84□□□□□ -0.67
CSNK1D-213ENST00000580446 PIGCQ92535 297 aa10.84□□□□□ -0.67
CSNK1D-213ENST00000580446 ZNF714Q96N38 554 aa10.84□□□□□ -0.67
CSNK1D-213ENST00000580446 OR8B4Q96RC9 309 aa10.84□□□□□ -0.67
CSNK1D-213ENST00000580446 NMNAT3Q96T66 252 aa10.84□□□□□ -0.67
CSNK1D-213ENST00000580446 PARD6BQ9BYG5 372 aa10.84□□□□□ -0.67
CSNK1D-213ENST00000580446 TUBA4BQ9H853 241 aa10.84□□□□□ -0.67
CSNK1D-213ENST00000580446 BRD7Q9NPI1 651 aa10.84□□□□□ -0.67
CSNK1D-213ENST00000580446 RPRD1BQ9NQG5 326 aaKnown RBP10.84□□□□□ -0.67
CSNK1D-213ENST00000580446 ZNF319Q9P2F9 582 aa10.84□□□□□ -0.67
CSNK1D-213ENST00000580446 HAO1Q9UJM8 370 aa10.84□□□□□ -0.67
CSNK1D-213ENST00000580446 FAT2Q9NYQ8 4349 aa10.83□□□□□ -0.68
CSNK1D-213ENST00000580446 TMEM210A6NLX4 147 aa10.83□□□□□ -0.68
CSNK1D-213ENST00000580446 PSPNO60542 156 aa10.83□□□□□ -0.68
CSNK1D-213ENST00000580446 IGHG2P01859 326 aa10.83□□□□□ -0.68
CSNK1D-213ENST00000580446 EWSR1Q01844 656 aaKnown RBP eCLIP10.83□□□□□ -0.685e-7■■■□□ 15.7
CSNK1D-213ENST00000580446 FOXE3Q13461 319 aa10.83□□□□□ -0.68
CSNK1D-213ENST00000580446 EIF2B1Q14232 305 aaKnown RBP10.83□□□□□ -0.68
CSNK1D-213ENST00000580446 RBM39Q14498 530 aaKnown RBP10.83□□□□□ -0.68
CSNK1D-213ENST00000580446 TAF13Q15543 124 aa10.83□□□□□ -0.68
CSNK1D-213ENST00000580446 KRT71Q3SY84 523 aa10.83□□□□□ -0.68
CSNK1D-213ENST00000580446 CEP78Q5JTW2 689 aa10.83□□□□□ -0.68
CSNK1D-213ENST00000580446 PRAMEF5Q5TYX0 476 aa10.83□□□□□ -0.68
CSNK1D-213ENST00000580446 DNM1P34Q6PK57 102 aa10.83□□□□□ -0.68
CSNK1D-213ENST00000580446 FAM57BQ71RH2 274 aa10.83□□□□□ -0.68
CSNK1D-213ENST00000580446 FUNDC1Q8IVP5 155 aa10.83□□□□□ -0.68
CSNK1D-213ENST00000580446 OR56B4Q8NH76 319 aa10.83□□□□□ -0.68
CSNK1D-213ENST00000580446 EME1Q96AY2 570 aa10.83□□□□□ -0.68
CSNK1D-213ENST00000580446 OPA3Q9H6K4 179 aa10.83□□□□□ -0.68
CSNK1D-213ENST00000580446 DNAJC27Q9NZQ0 273 aa10.83□□□□□ -0.68
CSNK1D-213ENST00000580446 KIAA2026Q5HYC2 2103 aa10.82□□□□□ -0.68
CSNK1D-213ENST00000580446 ZNF732B4DXR9 585 aa10.82□□□□□ -0.68
CSNK1D-213ENST00000580446 J3KTA2 159 aa10.82□□□□□ -0.68
CSNK1D-213ENST00000580446 UBDO15205 165 aa10.82□□□□□ -0.68
CSNK1D-213ENST00000580446 CRABP1P29762 137 aa10.82□□□□□ -0.68
CSNK1D-213ENST00000580446 PYCR1P32322 319 aa10.82□□□□□ -0.68
CSNK1D-213ENST00000580446 CX3CR1P49238 355 aa10.82□□□□□ -0.68
CSNK1D-213ENST00000580446 STX3Q13277 289 aa10.82□□□□□ -0.68
CSNK1D-213ENST00000580446 TPTE2P1Q5T6R2 138 aa10.82□□□□□ -0.68
CSNK1D-213ENST00000580446 HAGHLQ6PII5 290 aaPredicted RBP10.82□□□□□ -0.68
CSNK1D-213ENST00000580446 ADCK1Q86TW2 530 aa10.82□□□□□ -0.68
CSNK1D-213ENST00000580446 ZDHHC21Q8IVQ6 265 aa10.82□□□□□ -0.68
CSNK1D-213ENST00000580446 ABHD12Q8N2K0 398 aa10.82□□□□□ -0.68
CSNK1D-213ENST00000580446 KLK15Q9H2R5 256 aa10.82□□□□□ -0.68
CSNK1D-213ENST00000580446 OR51I2Q9H344 312 aa10.82□□□□□ -0.68
CSNK1D-213ENST00000580446 NRIP3Q9NQ35 241 aa10.82□□□□□ -0.68
CSNK1D-213ENST00000580446 TNCP24821 2201 aa10.81□□□□□ -0.68
CSNK1D-213ENST00000580446 HSPG2P98160 4391 aa10.81□□□□□ -0.68
CSNK1D-213ENST00000580446 RBP4P02753 201 aa10.81□□□□□ -0.68
CSNK1D-213ENST00000580446 TMEM11P17152 192 aa10.81□□□□□ -0.68
CSNK1D-213ENST00000580446 GDNFP39905 211 aa10.81□□□□□ -0.68
CSNK1D-213ENST00000580446 GPR12P47775 334 aa10.81□□□□□ -0.68
CSNK1D-213ENST00000580446 FXYD6P3P58550 94 aa10.81□□□□□ -0.68
CSNK1D-213ENST00000580446 ANKDD1AQ495B1 522 aa10.81□□□□□ -0.68
CSNK1D-213ENST00000580446 SLC36A3Q495N2 470 aa10.81□□□□□ -0.68
CSNK1D-213ENST00000580446 DLEU7Q6UYE1 221 aa10.81□□□□□ -0.68
CSNK1D-213ENST00000580446 DCXRQ7Z4W1 244 aa10.81□□□□□ -0.68
CSNK1D-213ENST00000580446 FAM71E2Q8N5Q1 922 aa10.81□□□□□ -0.68
CSNK1D-213ENST00000580446 OR4K13Q8NH42 304 aa10.81□□□□□ -0.68
CSNK1D-213ENST00000580446 AQP3Q92482 292 aa10.81□□□□□ -0.68
CSNK1D-213ENST00000580446 SPDL1Q96EA4 605 aa10.81□□□□□ -0.68
CSNK1D-213ENST00000580446 CORO2BQ9UQ03 480 aa10.81□□□□□ -0.68
CSNK1D-213ENST00000580446 SNX13Q9Y5W8 968 aa10.81□□□□□ -0.68
CSNK1D-213ENST00000580446 DNAH2Q9P225 4427 aa10.81□□□□□ -0.68
CSNK1D-213ENST00000580446 ARRDC5A6NEK1 342 aa10.8□□□□□ -0.68
CSNK1D-213ENST00000580446 LEUTXA8MZ59 168 aa10.8□□□□□ -0.68
CSNK1D-213ENST00000580446 I3L521 148 aa10.8□□□□□ -0.68
CSNK1D-213ENST00000580446 PSMD9O00233 223 aa10.8□□□□□ -0.68
CSNK1D-213ENST00000580446 NDUFB2O95178 105 aa10.8□□□□□ -0.68
CSNK1D-213ENST00000580446 FAM106CPP0CH98 169 aa10.8□□□□□ -0.68
CSNK1D-213ENST00000580446 NOS3P29474 1203 aa10.8□□□□□ -0.68
CSNK1D-213ENST00000580446 ST3GAL3Q11203 375 aa10.8□□□□□ -0.68
CSNK1D-213ENST00000580446 SMIM21Q3B7S5 101 aa10.8□□□□□ -0.68
CSNK1D-213ENST00000580446 FAM76BQ5HYJ3 339 aa10.8□□□□□ -0.68
CSNK1D-213ENST00000580446 ZNF730Q6ZMV8 503 aa10.8□□□□□ -0.68
CSNK1D-213ENST00000580446 TIGD4Q8IY51 512 aa10.8□□□□□ -0.68
CSNK1D-213ENST00000580446 ZDHHC23Q8IYP9 409 aa10.8□□□□□ -0.68
CSNK1D-213ENST00000580446 RNF152Q8N8N0 203 aa10.8□□□□□ -0.68
CSNK1D-213ENST00000580446 ZNRF4Q8WWF5 429 aa10.8□□□□□ -0.68
CSNK1D-213ENST00000580446 LZICQ8WZA0 190 aa10.8□□□□□ -0.68
CSNK1D-213ENST00000580446 SLAMF6Q96DU3 332 aa10.8□□□□□ -0.68
CSNK1D-213ENST00000580446 KCNJ15Q99712 375 aa10.8□□□□□ -0.68
CSNK1D-213ENST00000580446 RSRP1Q9BUV0 290 aa10.8□□□□□ -0.68
CSNK1D-213ENST00000580446 ZNF286AQ9HBT8 521 aa10.8□□□□□ -0.68
CSNK1D-213ENST00000580446 CCDC167Q9P0B6 97 aa10.8□□□□□ -0.68
CSNK1D-213ENST00000580446 CEPT1Q9Y6K0 416 aa10.8□□□□□ -0.68
CSNK1D-213ENST00000580446 A0A087WUU8 490 aa10.79□□□□□ -0.68
CSNK1D-213ENST00000580446 NUPR2A6NF83 97 aa10.79□□□□□ -0.68
CSNK1D-213ENST00000580446 TRPC5OSA6NMA1 111 aa10.79□□□□□ -0.68
CSNK1D-213ENST00000580446 ELANEP08246 267 aa10.79□□□□□ -0.68
CSNK1D-213ENST00000580446 ARHGDIBP52566 201 aa10.79□□□□□ -0.68
CSNK1D-213ENST00000580446 BDH1Q02338 343 aa10.79□□□□□ -0.68
CSNK1D-213ENST00000580446 ACSM6Q6P461 480 aa10.79□□□□□ -0.68
CSNK1D-213ENST00000580446 CEMP1Q6PRD7 247 aaPredicted RBP10.79□□□□□ -0.68
CSNK1D-213ENST00000580446 SMARCD3Q6STE5 483 aa10.79□□□□□ -0.68
CSNK1D-213ENST00000580446 GDPD3Q7L5L3 318 aa10.79□□□□□ -0.68
CSNK1D-213ENST00000580446 IFT20Q8IY31 132 aa10.79□□□□□ -0.68
CSNK1D-213ENST00000580446 FAM156AQ8NDB6 213 aa10.79□□□□□ -0.68
CSNK1D-213ENST00000580446 CSNK2A3Q8NEV1 391 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms