RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 PSMA6P60900 246 aaKnown RBP11.02□□□□□ -0.65
TRAF4-214ENST00000580073 ARF6P62330 175 aa11.02□□□□□ -0.65
TRAF4-214ENST00000580073 EGR3Q06889 387 aa11.02□□□□□ -0.65
TRAF4-214ENST00000580073 SRSF4Q08170 494 aaKnown RBP11.02□□□□□ -0.65
TRAF4-214ENST00000580073 NCR3LG1Q68D85 454 aa11.02□□□□□ -0.65
TRAF4-214ENST00000580073 KCTD18Q6PI47 426 aaPredicted RBP11.02□□□□□ -0.65
TRAF4-214ENST00000580073 C11orf88Q6PI97 169 aa11.02□□□□□ -0.65
TRAF4-214ENST00000580073 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.02□□□□□ -0.65
TRAF4-214ENST00000580073 DTX3Q8N9I9 347 aa11.02□□□□□ -0.65
TRAF4-214ENST00000580073 ZSCAN4Q8NAM6 433 aaPredicted RBP11.02□□□□□ -0.65
TRAF4-214ENST00000580073 CSNK2A3Q8NEV1 391 aa11.02□□□□□ -0.65
TRAF4-214ENST00000580073 LRRC29Q8WV35 223 aa11.02□□□□□ -0.65
TRAF4-214ENST00000580073 MROQ9BYG7 248 aa11.02□□□□□ -0.65
TRAF4-214ENST00000580073 ANKRD60Q9BZ19 345 aa11.02□□□□□ -0.65
TRAF4-214ENST00000580073 DNTTIP1Q9H147 329 aa11.02□□□□□ -0.65
TRAF4-214ENST00000580073 C16orf95Q9H693 158 aa11.02□□□□□ -0.65
TRAF4-214ENST00000580073 ERVK13-1Q9NX77 482 aa11.02□□□□□ -0.65
TRAF4-214ENST00000580073 ZNRD1Q9P1U0 126 aa11.02□□□□□ -0.65
TRAF4-214ENST00000580073 SLC22A13Q9Y226 551 aa11.02□□□□□ -0.65
TRAF4-214ENST00000580073 RPL36Q9Y3U8 105 aaKnown RBP11.02□□□□□ -0.65
TRAF4-214ENST00000580073 TGP01266 2768 aa11.02□□□□□ -0.65
TRAF4-214ENST00000580073 TMEM269A0A1B0GVZ9 245 aa11.01□□□□□ -0.65
TRAF4-214ENST00000580073 E9PI62 339 aa11.01□□□□□ -0.65
TRAF4-214ENST00000580073 RPP14O95059 124 aaKnown RBP11.01□□□□□ -0.65
TRAF4-214ENST00000580073 IGLV3-1P01715 115 aa11.01□□□□□ -0.65
TRAF4-214ENST00000580073 DCTDP32321 178 aa11.01□□□□□ -0.65
TRAF4-214ENST00000580073 RIDAP52758 137 aaKnown RBP11.01□□□□□ -0.65
TRAF4-214ENST00000580073 FAM3AP98173 230 aa11.01□□□□□ -0.65
TRAF4-214ENST00000580073 RAB40BQ12829 278 aa11.01□□□□□ -0.65
TRAF4-214ENST00000580073 C6orf141Q5SZD1 244 aa11.01□□□□□ -0.65
TRAF4-214ENST00000580073 ASPHD2Q6ICH7 369 aa11.01□□□□□ -0.65
TRAF4-214ENST00000580073 PRSS35Q8N3Z0 413 aa11.01□□□□□ -0.65
TRAF4-214ENST00000580073 ACBD7Q8N6N7 88 aa11.01□□□□□ -0.65
TRAF4-214ENST00000580073 YIPF7Q8N8F6 280 aa11.01□□□□□ -0.65
TRAF4-214ENST00000580073 BPIFB6Q8NFQ5 453 aa11.01□□□□□ -0.65
TRAF4-214ENST00000580073 OR52H1Q8NGJ2 320 aa11.01□□□□□ -0.65
TRAF4-214ENST00000580073 RORBQ92753 470 aa11.01□□□□□ -0.65
TRAF4-214ENST00000580073 PGAM5Q96HS1 289 aa11.01□□□□□ -0.65
TRAF4-214ENST00000580073 MICU1Q9BPX6 476 aa11.01□□□□□ -0.65
TRAF4-214ENST00000580073 PBOV1Q9GZY1 135 aa11.01□□□□□ -0.65
TRAF4-214ENST00000580073 RGCCQ9H4X1 137 aa11.01□□□□□ -0.65
TRAF4-214ENST00000580073 NIPAL2Q9H841 368 aa11.01□□□□□ -0.65
TRAF4-214ENST00000580073 PLCXD1Q9NUJ7 323 aa11.01□□□□□ -0.65
TRAF4-214ENST00000580073 FKBP14Q9NWM8 211 aa11.01□□□□□ -0.65
TRAF4-214ENST00000580073 PAK1IP1Q9NWT1 392 aaPredicted RBP11.01□□□□□ -0.65
TRAF4-214ENST00000580073 DNAJB11Q9UBS4 358 aa11.01□□□□□ -0.65
TRAF4-214ENST00000580073 CLEC2DQ9UHP7 191 aa11.01□□□□□ -0.65
TRAF4-214ENST00000580073 PSORS1C1Q9UIG5 152 aa11.01□□□□□ -0.65
TRAF4-214ENST00000580073 R4GMQ9 66 aa11.01□□□□□ -0.65
TRAF4-214ENST00000580073 A0A1B0GTI1 187 aa11□□□□□ -0.65
TRAF4-214ENST00000580073 hCG_38984A0A1B0GV85 526 aa11□□□□□ -0.65
TRAF4-214ENST00000580073 DAPL1A0PJW8 107 aa11□□□□□ -0.65
TRAF4-214ENST00000580073 ANKRD61A6NGH8 418 aa11□□□□□ -0.65
TRAF4-214ENST00000580073 TMEM210A6NLX4 147 aa11□□□□□ -0.65
TRAF4-214ENST00000580073 LHBP01229 141 aa11□□□□□ -0.65
TRAF4-214ENST00000580073 TTRP02766 147 aa11□□□□□ -0.65
TRAF4-214ENST00000580073 CSF1P09603 554 aa11□□□□□ -0.65
TRAF4-214ENST00000580073 ACKR3P25106 362 aa11□□□□□ -0.65
TRAF4-214ENST00000580073 KIR3DL2P43630 455 aa11□□□□□ -0.65
TRAF4-214ENST00000580073 NANOS3P60323 173 aaKnown RBP11□□□□□ -0.65
TRAF4-214ENST00000580073 BLMHQ13867 455 aa11□□□□□ -0.65
TRAF4-214ENST00000580073 GALEQ14376 348 aa11□□□□□ -0.65
TRAF4-214ENST00000580073 KLHL22Q53GT1 634 aa11□□□□□ -0.65
TRAF4-214ENST00000580073 Q6ZTK2 550 aa11□□□□□ -0.65
TRAF4-214ENST00000580073 CATSPERDQ86XM0 798 aa11□□□□□ -0.65
TRAF4-214ENST00000580073 PELI1Q96FA3 418 aa11□□□□□ -0.65
TRAF4-214ENST00000580073 REEP6Q96HR9 211 aa11□□□□□ -0.65
TRAF4-214ENST00000580073 RTL8AQ9BWD3 113 aa11□□□□□ -0.65
TRAF4-214ENST00000580073 PAPOLGQ9BWT3 736 aaKnown RBP11□□□□□ -0.65
TRAF4-214ENST00000580073 JAM3Q9BX67 310 aa11□□□□□ -0.65
TRAF4-214ENST00000580073 VCX3BQ9H321 246 aa11□□□□□ -0.65
TRAF4-214ENST00000580073 RAB18Q9NP72 206 aa11□□□□□ -0.65
TRAF4-214ENST00000580073 PLXNB1O43157 2135 aa10.99□□□□□ -0.65
TRAF4-214ENST00000580073 SNTNA6NMZ2 147 aa10.99□□□□□ -0.65
TRAF4-214ENST00000580073 J3QLW9 94 aa10.99□□□□□ -0.65
TRAF4-214ENST00000580073 NPFFO15130 113 aa10.99□□□□□ -0.65
TRAF4-214ENST00000580073 SULT1C4O75897 302 aa10.99□□□□□ -0.65
TRAF4-214ENST00000580073 TSPAN9O75954 239 aa10.99□□□□□ -0.65
TRAF4-214ENST00000580073 FADS2O95864 444 aaKnown RBP10.99□□□□□ -0.65
TRAF4-214ENST00000580073 KRT8P05787 483 aa10.99□□□□□ -0.65
TRAF4-214ENST00000580073 ZNF19P17023 458 aa10.99□□□□□ -0.65
TRAF4-214ENST00000580073 C21orf33P30042 268 aaPredicted RBP10.99□□□□□ -0.65
TRAF4-214ENST00000580073 GSK3AP49840 483 aa10.99□□□□□ -0.65
TRAF4-214ENST00000580073 ACTC1P68032 377 aa10.99□□□□□ -0.65
TRAF4-214ENST00000580073 ACTA1P68133 377 aa10.99□□□□□ -0.65
TRAF4-214ENST00000580073 ACSM1Q08AH1 577 aa10.99□□□□□ -0.65
TRAF4-214ENST00000580073 ST3GAL4Q11206 333 aa10.99□□□□□ -0.65
TRAF4-214ENST00000580073 GFOD2Q3B7J2 385 aa10.99□□□□□ -0.65
TRAF4-214ENST00000580073 WDR38Q5JTN6 314 aa10.99□□□□□ -0.65
TRAF4-214ENST00000580073 OR2G6Q5TZ20 316 aa10.99□□□□□ -0.65
TRAF4-214ENST00000580073 XAF1Q6GPH4 301 aa10.99□□□□□ -0.65
TRAF4-214ENST00000580073 Q6ZSV7 163 aa10.99□□□□□ -0.65
TRAF4-214ENST00000580073 ZNF826PQ6ZT77 177 aa10.99□□□□□ -0.65
TRAF4-214ENST00000580073 ELMOD2Q8IZ81 293 aa10.99□□□□□ -0.65
TRAF4-214ENST00000580073 ZNF485Q8NCK3 441 aa10.99□□□□□ -0.65
TRAF4-214ENST00000580073 LY6G5BQ8NDX9 201 aa10.99□□□□□ -0.65
TRAF4-214ENST00000580073 OR1M1Q8NGA1 313 aa10.99□□□□□ -0.65
TRAF4-214ENST00000580073 OR10Z1Q8NGY1 313 aa10.99□□□□□ -0.65
TRAF4-214ENST00000580073 C8orf46Q8TAG6 207 aa10.99□□□□□ -0.65
TRAF4-214ENST00000580073 OR51E1Q8TCB6 317 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms