RNA–Protein interactions for RNA: ENST00000578922.1

SMG8-203, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

BASIC

Gene SMG8, Length 2,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-203ENST00000578922 CHST6Q9GZX3 395 aa17.54■□□□□ 0.4
SMG8-203ENST00000578922 MFFQ9GZY8 342 aa17.54■□□□□ 0.4
SMG8-203ENST00000578922 FAM215AQ9Y5M1 114 aa17.54■□□□□ 0.4
SMG8-203ENST00000578922 A8MXK9 166 aa17.53■□□□□ 0.4
SMG8-203ENST00000578922 ZNF736B4DX44 427 aaPredicted RBP17.53■□□□□ 0.4
SMG8-203ENST00000578922 HOXD11P31277 338 aaPredicted RBP17.53■□□□□ 0.4
SMG8-203ENST00000578922 ARR3P36575 388 aa17.53■□□□□ 0.4
SMG8-203ENST00000578922 NUP62P37198 522 aaPredicted RBP17.53■□□□□ 0.4
SMG8-203ENST00000578922 SRSF4Q08170 494 aaKnown RBP17.53■□□□□ 0.4
SMG8-203ENST00000578922 PMPCAQ10713 525 aa17.53■□□□□ 0.4
SMG8-203ENST00000578922 MEF2DQ14814 521 aa17.53■□□□□ 0.4
SMG8-203ENST00000578922 KRTCAP3Q53RY4 240 aa17.53■□□□□ 0.4
SMG8-203ENST00000578922 ALKAL2Q6UX46 152 aa17.53■□□□□ 0.4
SMG8-203ENST00000578922 EIF4E3Q8N5X7 224 aaKnown RBP17.53■□□□□ 0.4
SMG8-203ENST00000578922 COQ8AQ8NI60 647 aa17.53■□□□□ 0.4
SMG8-203ENST00000578922 CNTD2Q9H8S5 307 aa17.53■□□□□ 0.4
SMG8-203ENST00000578922 V9GYS6 101 aa17.53■□□□□ 0.4
SMG8-203ENST00000578922 INTS1Q8N201 2190 aaKnown RBP17.53■□□□□ 0.4
SMG8-203ENST00000578922 TNFSF13O75888 250 aa17.53■□□□□ 0.4
SMG8-203ENST00000578922 CD8AP01732 235 aa17.53■□□□□ 0.4
SMG8-203ENST00000578922 AMY2AP04746 511 aa17.53■□□□□ 0.4
SMG8-203ENST00000578922 EDN3P14138 238 aa17.53■□□□□ 0.4
SMG8-203ENST00000578922 ZNF324BQ6AW86 544 aaPredicted RBP17.53■□□□□ 0.4
SMG8-203ENST00000578922 Q6ZT83 130 aa17.53■□□□□ 0.4
SMG8-203ENST00000578922 HSD17B13Q7Z5P4 300 aaPredicted RBP17.53■□□□□ 0.4
SMG8-203ENST00000578922 MDP1Q86V88 176 aa17.53■□□□□ 0.4
SMG8-203ENST00000578922 ZNF584Q8IVC4 421 aa17.53■□□□□ 0.4
SMG8-203ENST00000578922 PDZD9Q8IXQ8 264 aa17.53■□□□□ 0.4
SMG8-203ENST00000578922 OR5AS1Q8N127 324 aa17.53■□□□□ 0.4
SMG8-203ENST00000578922 OPN3Q9H1Y3 402 aaPredicted RBP17.53■□□□□ 0.4
SMG8-203ENST00000578922 SLC2A8Q9NY64 477 aa17.53■□□□□ 0.4
SMG8-203ENST00000578922 GLS2Q9UI32 602 aa17.53■□□□□ 0.4
SMG8-203ENST00000578922 A0A0D9SG52 128 aa17.52■□□□□ 0.4
SMG8-203ENST00000578922 A0A1B0GW55 424 aa17.52■□□□□ 0.4
SMG8-203ENST00000578922 METTL21EPA6NDL7 271 aa17.52■□□□□ 0.4
SMG8-203ENST00000578922 HCKP08631 526 aa17.52■□□□□ 0.4
SMG8-203ENST00000578922 ZNF735P0CB33 412 aa17.52■□□□□ 0.4
SMG8-203ENST00000578922 DUX4L2P0CJ85 424 aa17.52■□□□□ 0.4
SMG8-203ENST00000578922 DUX4L3P0CJ86 424 aa17.52■□□□□ 0.4
SMG8-203ENST00000578922 DUX4L4P0CJ87 422 aa17.52■□□□□ 0.4
SMG8-203ENST00000578922 DUX4L5P0CJ88 424 aa17.52■□□□□ 0.4
SMG8-203ENST00000578922 DUX4L6P0CJ89 424 aa17.52■□□□□ 0.4
SMG8-203ENST00000578922 DUX4L7P0CJ90 424 aa17.52■□□□□ 0.4
SMG8-203ENST00000578922 ACKR3P25106 362 aa17.52■□□□□ 0.4
SMG8-203ENST00000578922 MPZP25189 248 aa17.52■□□□□ 0.4
SMG8-203ENST00000578922 UBE2MP61081 183 aaKnown RBP17.52■□□□□ 0.4
SMG8-203ENST00000578922 ZNF92Q03936 586 aa17.52■□□□□ 0.4
SMG8-203ENST00000578922 ZMYND11Q15326 602 aa17.52■□□□□ 0.4
SMG8-203ENST00000578922 OR10K2Q6IF99 312 aa17.52■□□□□ 0.4
SMG8-203ENST00000578922 ZNF529Q6P280 563 aa17.52■□□□□ 0.4
SMG8-203ENST00000578922 PGAP1Q75T13 922 aa17.52■□□□□ 0.4
SMG8-203ENST00000578922 LYPD6Q86Y78 171 aa17.52■□□□□ 0.4
SMG8-203ENST00000578922 NAXEQ8NCW5 288 aa17.52■□□□□ 0.4
SMG8-203ENST00000578922 DUX4Q9UBX2 424 aa17.52■□□□□ 0.4
SMG8-203ENST00000578922 RAB22AQ9UL26 194 aa17.52■□□□□ 0.4
SMG8-203ENST00000578922 IGKV1-9A0A0C4DH69 117 aa17.52■□□□□ 0.39
SMG8-203ENST00000578922 MBD3L4A6NDZ8 208 aaPredicted RBP17.52■□□□□ 0.39
SMG8-203ENST00000578922 MBD3L3A6NE82 208 aaPredicted RBP17.52■□□□□ 0.39
SMG8-203ENST00000578922 MBD3L5A6NJ08 208 aaPredicted RBP17.52■□□□□ 0.39
SMG8-203ENST00000578922 FIGNL2A6NMB9 653 aa17.52■□□□□ 0.39
SMG8-203ENST00000578922 DISC1C4P0D8 188 aa17.52■□□□□ 0.39
SMG8-203ENST00000578922 MTRF1O75570 445 aaKnown RBP17.52■□□□□ 0.39
SMG8-203ENST00000578922 PLP2Q04941 152 aa17.52■□□□□ 0.39
SMG8-203ENST00000578922 C1orf185Q5T7R7 199 aa17.52■□□□□ 0.39
SMG8-203ENST00000578922 ZNF660Q6AZW8 331 aaPredicted RBP17.52■□□□□ 0.39
SMG8-203ENST00000578922 MBD3L2Q8NHZ7 208 aaPredicted RBP17.52■□□□□ 0.39
SMG8-203ENST00000578922 HOXD4P09016 255 aaPredicted RBP17.51■□□□□ 0.39
SMG8-203ENST00000578922 MGMTP16455 207 aa17.51■□□□□ 0.39
SMG8-203ENST00000578922 ZNF93P35789 620 aaPredicted RBP17.51■□□□□ 0.39
SMG8-203ENST00000578922 SORDQ00796 357 aa17.51■□□□□ 0.39
SMG8-203ENST00000578922 TGFBR3Q03167 851 aa17.51■□□□□ 0.39
SMG8-203ENST00000578922 LY6G6FQ5SQ64 297 aa17.51■□□□□ 0.39
SMG8-203ENST00000578922 BPIFB2Q8N4F0 458 aa17.51■□□□□ 0.39
SMG8-203ENST00000578922 ZNF610Q8N9Z0 462 aa17.51■□□□□ 0.39
SMG8-203ENST00000578922 SEMA6DQ8NFY4 1073 aa17.51■□□□□ 0.39
SMG8-203ENST00000578922 STARD4Q96DR4 205 aa17.51■□□□□ 0.39
SMG8-203ENST00000578922 CXorf58Q96LI9 332 aa17.51■□□□□ 0.39
SMG8-203ENST00000578922 PRRT1Q99946 306 aa17.51■□□□□ 0.39
SMG8-203ENST00000578922 WDR1O75083 606 aa17.5■□□□□ 0.39
SMG8-203ENST00000578922 SCGNO76038 276 aa17.5■□□□□ 0.39
SMG8-203ENST00000578922 FGF2P09038 288 aa17.5■□□□□ 0.39
SMG8-203ENST00000578922 ATPAF1Q5TC12 328 aaPredicted RBP17.5■□□□□ 0.39
SMG8-203ENST00000578922 LIN54Q6MZP7 749 aa17.5■□□□□ 0.39
SMG8-203ENST00000578922 OR5M8Q8NGP6 311 aa17.5■□□□□ 0.39
SMG8-203ENST00000578922 FAM57AQ8TBR7 257 aa17.5■□□□□ 0.39
SMG8-203ENST00000578922 NANOS1Q8WY41 292 aaKnown RBP17.5■□□□□ 0.39
SMG8-203ENST00000578922 AQP3Q92482 292 aa17.5■□□□□ 0.39
SMG8-203ENST00000578922 SNRNP40Q96DI7 357 aaKnown RBP17.5■□□□□ 0.39
SMG8-203ENST00000578922 C1QTNF5Q9BXJ0 243 aa17.5■□□□□ 0.39
SMG8-203ENST00000578922 TINAGL1Q9GZM7 467 aaPredicted RBP17.5■□□□□ 0.39
SMG8-203ENST00000578922 SLC25A32Q9H2D1 315 aa17.5■□□□□ 0.39
SMG8-203ENST00000578922 OR51B6Q9H340 312 aa17.5■□□□□ 0.39
SMG8-203ENST00000578922 PROCRQ9UNN8 238 aa17.5■□□□□ 0.39
SMG8-203ENST00000578922 UBBP0CG47 229 aa17.5■□□□□ 0.39
SMG8-203ENST00000578922 TDGF1P3P51864 188 aa17.5■□□□□ 0.39
SMG8-203ENST00000578922 UBE2NP61088 152 aaKnown RBP17.5■□□□□ 0.39
SMG8-203ENST00000578922 RPS27AP62979 156 aaKnown RBP17.5■□□□□ 0.39
SMG8-203ENST00000578922 UBA52P62987 128 aaKnown RBP17.5■□□□□ 0.39
SMG8-203ENST00000578922 UBE2V2Q15819 145 aa17.5■□□□□ 0.39
SMG8-203ENST00000578922 PAQR4Q8N4S7 273 aaPredicted RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms