RNA–Protein interactions for RNA: ENST00000578595.1

SS18-209, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 406 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-209ENST00000578595 CCR9P51686 369 aa16.19■□□□□ 0.18
SS18-209ENST00000578595 CAPZA1P52907 286 aa16.19■□□□□ 0.18
SS18-209ENST00000578595 MRPL28Q13084 256 aaKnown RBP16.19■□□□□ 0.18
SS18-209ENST00000578595 UBE2V2Q15819 145 aa16.19■□□□□ 0.18
SS18-209ENST00000578595 SMIM21Q3B7S5 101 aa16.19■□□□□ 0.18
SS18-209ENST00000578595 STUMQ69YW2 141 aa16.19■□□□□ 0.18
SS18-209ENST00000578595 FDX2Q6P4F2 183 aa16.19■□□□□ 0.18
SS18-209ENST00000578595 BTN2A1Q7KYR7 527 aa16.19■□□□□ 0.18
SS18-209ENST00000578595 ANGPTL5Q86XS5 388 aa16.19■□□□□ 0.18
SS18-209ENST00000578595 FGFRL1Q8N441 504 aa16.19■□□□□ 0.18
SS18-209ENST00000578595 OR10AC1Q8NH08 325 aa16.19■□□□□ 0.18
SS18-209ENST00000578595 OR5AK2Q8NH90 309 aa16.19■□□□□ 0.18
SS18-209ENST00000578595 PP6455Q8WZ26 134 aa16.19■□□□□ 0.18
SS18-209ENST00000578595 PCGF1Q9BSM1 259 aa16.19■□□□□ 0.18
SS18-209ENST00000578595 KAAG1Q9UBP8 84 aa16.19■□□□□ 0.18
SS18-209ENST00000578595 SVEP1Q4LDE5 3571 aa16.18■□□□□ 0.18
SS18-209ENST00000578595 TRAV40A0A0B4J280 105 aa16.18■□□□□ 0.18
SS18-209ENST00000578595 TRBV2A0A0J9YWF9 115 aa16.18■□□□□ 0.18
SS18-209ENST00000578595 OR4C45A6NMZ5 311 aa16.18■□□□□ 0.18
SS18-209ENST00000578595 LIMS3P0CW19 117 aa16.18■□□□□ 0.18
SS18-209ENST00000578595 LIMS4P0CW20 117 aa16.18■□□□□ 0.18
SS18-209ENST00000578595 SELLP14151 372 aa16.18■□□□□ 0.18
SS18-209ENST00000578595 POU3F4P49335 361 aa16.18■□□□□ 0.18
SS18-209ENST00000578595 ETV1P50549 477 aa16.18■□□□□ 0.18
SS18-209ENST00000578595 FUT6P51993 359 aa16.18■□□□□ 0.18
SS18-209ENST00000578595 FGF12P61328 243 aa16.18■□□□□ 0.18
SS18-209ENST00000578595 IL13RA1P78552 427 aa16.18■□□□□ 0.18
SS18-209ENST00000578595 OR2G6Q5TZ20 316 aa16.18■□□□□ 0.18
SS18-209ENST00000578595 Q6ZSR3 168 aa16.18■□□□□ 0.18
SS18-209ENST00000578595 PNLDC1Q8NA58 520 aaKnown RBP16.18■□□□□ 0.18
SS18-209ENST00000578595 POC1AQ8NBT0 407 aa16.18■□□□□ 0.18
SS18-209ENST00000578595 TMEM185AQ8NFB2 350 aa16.18■□□□□ 0.18
SS18-209ENST00000578595 OR51A4Q8NGJ6 313 aa16.18■□□□□ 0.18
SS18-209ENST00000578595 RNF166Q96A37 237 aaPredicted RBP16.18■□□□□ 0.18
SS18-209ENST00000578595 C10orf35Q96D05 121 aa16.18■□□□□ 0.18
SS18-209ENST00000578595 ADAT3Q96EY9 351 aaPredicted RBP16.18■□□□□ 0.18
SS18-209ENST00000578595 SLC6A7Q99884 636 aa16.18■□□□□ 0.18
SS18-209ENST00000578595 OR14J1Q9UGF5 321 aa16.18■□□□□ 0.18
SS18-209ENST00000578595 EXOSC1Q9Y3B2 195 aaKnown RBP16.18■□□□□ 0.18
SS18-209ENST00000578595 HSPE1-MOB4S4R3N1 261 aa16.18■□□□□ 0.18
SS18-209ENST00000578595 KIR2DS1A0A191URI9 304 aa16.17■□□□□ 0.18
SS18-209ENST00000578595 TMEM212A6NML5 194 aa16.17■□□□□ 0.18
SS18-209ENST00000578595 E9PI62 339 aa16.17■□□□□ 0.18
SS18-209ENST00000578595 TNFRSF13BO14836 293 aaPredicted RBP16.17■□□□□ 0.18
SS18-209ENST00000578595 ISG15P05161 165 aa16.17■□□□□ 0.18
SS18-209ENST00000578595 NDUFB7P17568 137 aa16.17■□□□□ 0.18
SS18-209ENST00000578595 FPR2P25090 351 aa16.17■□□□□ 0.18
SS18-209ENST00000578595 ATP1B3P54709 279 aa16.17■□□□□ 0.18
SS18-209ENST00000578595 PAX2Q02962 417 aa16.17■□□□□ 0.18
SS18-209ENST00000578595 PAX8Q06710 450 aa16.17■□□□□ 0.18
SS18-209ENST00000578595 AHSA2Q719I0 299 aa16.17■□□□□ 0.18
SS18-209ENST00000578595 CALHM1Q8IU99 346 aa16.17■□□□□ 0.18
SS18-209ENST00000578595 BPIFB6Q8NFQ5 453 aa16.17■□□□□ 0.18
SS18-209ENST00000578595 OR13C9Q8NGT0 318 aa16.17■□□□□ 0.18
SS18-209ENST00000578595 TMEM158Q8WZ71 300 aa16.17■□□□□ 0.18
SS18-209ENST00000578595 TMEM80Q96HE8 168 aa16.17■□□□□ 0.18
SS18-209ENST00000578595 MED30Q96HR3 178 aa16.17■□□□□ 0.18
SS18-209ENST00000578595 MDFIQ99750 246 aa16.17■□□□□ 0.18
SS18-209ENST00000578595 PDCD1LG2Q9BQ51 273 aa16.17■□□□□ 0.18
SS18-209ENST00000578595 MS4A7Q9GZW8 240 aaPredicted RBP16.17■□□□□ 0.18
SS18-209ENST00000578595 VCX3BQ9H321 246 aa16.17■□□□□ 0.18
SS18-209ENST00000578595 ONECUT1Q9UBC0 465 aa16.17■□□□□ 0.18
SS18-209ENST00000578595 NUP50Q9UKX7 468 aa16.17■□□□□ 0.18
SS18-209ENST00000578595 DHDHQ9UQ10 334 aa16.17■□□□□ 0.18
SS18-209ENST00000578595 CAB39Q9Y376 341 aaPredicted RBP16.17■□□□□ 0.18
SS18-209ENST00000578595 ECDO95905 644 aaPredicted RBP16.16■□□□□ 0.18
SS18-209ENST00000578595 CYB5AP00167 134 aa16.16■□□□□ 0.18
SS18-209ENST00000578595 PGA5P0DJD9 388 aa16.16■□□□□ 0.18
SS18-209ENST00000578595 AZGP1P25311 298 aaKnown RBP16.16■□□□□ 0.18
SS18-209ENST00000578595 GTF2A1P52655 376 aaPredicted RBP16.16■□□□□ 0.18
SS18-209ENST00000578595 AQP4P55087 323 aa16.16■□□□□ 0.18
SS18-209ENST00000578595 METTL11BQ5VVY1 283 aa16.16■□□□□ 0.18
SS18-209ENST00000578595 ACP7Q6ZNF0 438 aa16.16■□□□□ 0.18
SS18-209ENST00000578595 STX19Q8N4C7 294 aa16.16■□□□□ 0.18
SS18-209ENST00000578595 ANGPTL6Q8NI99 470 aa16.16■□□□□ 0.18
SS18-209ENST00000578595 HAVCR2Q8TDQ0 301 aa16.16■□□□□ 0.18
SS18-209ENST00000578595 SLAMF9Q96A28 289 aa16.16■□□□□ 0.18
SS18-209ENST00000578595 GAFA1Q96PS6 74 aa16.16■□□□□ 0.18
SS18-209ENST00000578595 SUCNR1Q9BXA5 334 aa16.16■□□□□ 0.18
SS18-209ENST00000578595 PKIBQ9C010 78 aa16.16■□□□□ 0.18
SS18-209ENST00000578595 DNTTIP1Q9H147 329 aa16.16■□□□□ 0.18
SS18-209ENST00000578595 NEK6Q9HC98 313 aa16.16■□□□□ 0.18
SS18-209ENST00000578595 RASL12Q9NYN1 266 aa16.16■□□□□ 0.18
SS18-209ENST00000578595 SLC25A10Q9UBX3 287 aaPredicted RBP16.16■□□□□ 0.18
SS18-209ENST00000578595 DIMT1Q9UNQ2 313 aaKnown RBP16.16■□□□□ 0.18
SS18-209ENST00000578595 A0A1W2PQ09 198 aa16.15■□□□□ 0.18
SS18-209ENST00000578595 EFCAB10A6NFE3 127 aa16.15■□□□□ 0.18
SS18-209ENST00000578595 XPNPEP2O43895 674 aa16.15■□□□□ 0.18
SS18-209ENST00000578595 TOX4O94842 621 aa16.15■□□□□ 0.18
SS18-209ENST00000578595 ZFPL1O95159 310 aa16.15■□□□□ 0.18
SS18-209ENST00000578595 PSG2P11465 335 aa16.15■□□□□ 0.18
SS18-209ENST00000578595 ATF1P18846 271 aa16.15■□□□□ 0.18
SS18-209ENST00000578595 PRKACBP22694 351 aa16.15■□□□□ 0.18
SS18-209ENST00000578595 CEBPDP49716 269 aaPredicted RBP16.15■□□□□ 0.18
SS18-209ENST00000578595 RBP2P50120 134 aa16.15■□□□□ 0.18
SS18-209ENST00000578595 MTCP1P56278 107 aa16.15■□□□□ 0.18
SS18-209ENST00000578595 ST3GAL4Q11206 333 aa16.15■□□□□ 0.18
SS18-209ENST00000578595 RBMS3Q6XE24 437 aaKnown RBP16.15■□□□□ 0.18
SS18-209ENST00000578595 ZNF788Q6ZQV5 615 aa16.15■□□□□ 0.18
SS18-209ENST00000578595 SLC25A26Q70HW3 274 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms