RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-209	ENST00000578329	NUFIP1	Q9UHK0	495 aa	Known RBP	3.58	□□□□□ -1.84
PPP4R1-209	ENST00000578329	MPC1	Q9Y5U8	109 aa		3.58	□□□□□ -1.84
PPP4R1-209	ENST00000578329		V9GYS6	101 aa		3.58	□□□□□ -1.84
PPP4R1-209	ENST00000578329	KIAA2026	Q5HYC2	2103 aa		3.58	□□□□□ -1.84
PPP4R1-209	ENST00000578329	TMEM269	A0A1B0GVZ9	245 aa		3.57	□□□□□ -1.84
PPP4R1-209	ENST00000578329	TMEM210	A6NLX4	147 aa		3.57	□□□□□ -1.84
PPP4R1-209	ENST00000578329	AQP12B	A6NM10	295 aa		3.57	□□□□□ -1.84
PPP4R1-209	ENST00000578329	RIIAD1	A6NNX1	92 aa		3.57	□□□□□ -1.84
PPP4R1-209	ENST00000578329	ZAR1L	A6NP61	321 aa		3.57	□□□□□ -1.84
PPP4R1-209	ENST00000578329	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	3.57	□□□□□ -1.84
PPP4R1-209	ENST00000578329		H3BSH0	61 aa		3.57	□□□□□ -1.84
PPP4R1-209	ENST00000578329		J3QRE1	110 aa		3.57	□□□□□ -1.84
PPP4R1-209	ENST00000578329		K7N7A8	449 aa		3.57	□□□□□ -1.84
PPP4R1-209	ENST00000578329	ATP8B1	O43520	1251 aa		3.57	□□□□□ -1.84
PPP4R1-209	ENST00000578329	NDUFB3	O43676	98 aa		3.57	□□□□□ -1.84
PPP4R1-209	ENST00000578329	FKBP6	O75344	327 aa		3.57	□□□□□ -1.84
PPP4R1-209	ENST00000578329	TIPRL	O75663	272 aa		3.57	□□□□□ -1.84
PPP4R1-209	ENST00000578329	APOL3	O95236	402 aa		3.57	□□□□□ -1.84
PPP4R1-209	ENST00000578329	FAM107A	O95990	144 aa		3.57	□□□□□ -1.84
PPP4R1-209	ENST00000578329	CST1	P01037	141 aa		3.57	□□□□□ -1.84
PPP4R1-209	ENST00000578329	IGHA1	P01876	353 aa		3.57	□□□□□ -1.84
PPP4R1-209	ENST00000578329	OPN1MW	P04001	364 aa		3.57	□□□□□ -1.84
PPP4R1-209	ENST00000578329	FBP1	P09467	338 aa		3.57	□□□□□ -1.84
PPP4R1-209	ENST00000578329	H2BFM	P0C1H6	154 aa		3.57	□□□□□ -1.84
PPP4R1-209	ENST00000578329	OPN1MW2	P0DN77	364 aa		3.57	□□□□□ -1.84
PPP4R1-209	ENST00000578329	OPN1MW3	P0DN78	364 aa		3.57	□□□□□ -1.84
PPP4R1-209	ENST00000578329	CGB3	P0DN86	165 aa		3.57	□□□□□ -1.84
PPP4R1-209	ENST00000578329	CGB7	P0DN87	165 aa		3.57	□□□□□ -1.84
PPP4R1-209	ENST00000578329	ZNF3	P17036	446 aa		3.57	□□□□□ -1.84
PPP4R1-209	ENST00000578329	POU1F1	P28069	291 aa		3.57	□□□□□ -1.84
PPP4R1-209	ENST00000578329	PRDX2	P32119	198 aa		3.57	□□□□□ -1.84
PPP4R1-209	ENST00000578329	TGFBR2	P37173	567 aa		3.57	□□□□□ -1.84
PPP4R1-209	ENST00000578329	SLC15A1	P46059	708 aa		3.57	□□□□□ -1.84
PPP4R1-209	ENST00000578329	NPBWR2	P48146	333 aa		3.57	□□□□□ -1.84
PPP4R1-209	ENST00000578329	CRISP1	P54107	249 aa		3.57	□□□□□ -1.84
PPP4R1-209	ENST00000578329	NANOS3	P60323	173 aa	Known RBP	3.57	□□□□□ -1.84
PPP4R1-209	ENST00000578329	KRTAP10-11	P60412	298 aa		3.57	□□□□□ -1.84
PPP4R1-209	ENST00000578329	IL5RA	Q01344	420 aa		3.57	□□□□□ -1.84
PPP4R1-209	ENST00000578329	ZNF85	Q03923	595 aa		3.57	□□□□□ -1.84
PPP4R1-209	ENST00000578329	ACSM1	Q08AH1	577 aa		3.57	□□□□□ -1.84
PPP4R1-209	ENST00000578329	PTGES3	Q15185	160 aa	Known RBP	3.57	□□□□□ -1.84
PPP4R1-209	ENST00000578329	TAF13	Q15543	124 aa		3.57	□□□□□ -1.84
PPP4R1-209	ENST00000578329	SLX4IP	Q5VYV7	408 aa		3.57	□□□□□ -1.84
PPP4R1-209	ENST00000578329	KDM4D	Q6B0I6	523 aa		3.57	□□□□□ -1.84
PPP4R1-209	ENST00000578329	FAM53A	Q6NSI3	398 aa	Predicted RBP	3.57	□□□□□ -1.84
PPP4R1-209	ENST00000578329	C16orf89	Q6UX73	402 aa		3.57	□□□□□ -1.84
PPP4R1-209	ENST00000578329	ZNF782	Q6ZMW2	699 aa	Predicted RBP	3.57	□□□□□ -1.84
PPP4R1-209	ENST00000578329	SHF	Q7M4L6	423 aa		3.57	□□□□□ -1.84
PPP4R1-209	ENST00000578329	SLC36A1	Q7Z2H8	476 aa		3.57	□□□□□ -1.84
PPP4R1-209	ENST00000578329	THAP5	Q7Z6K1	395 aa		3.57	□□□□□ -1.84
PPP4R1-209	ENST00000578329	CPLX4	Q7Z7G2	160 aa		3.57	□□□□□ -1.84
PPP4R1-209	ENST00000578329	CATSPERD	Q86XM0	798 aa		3.57	□□□□□ -1.84
PPP4R1-209	ENST00000578329	TMEM219	Q86XT9	240 aa		3.57	□□□□□ -1.84
PPP4R1-209	ENST00000578329	AQP12A	Q8IXF9	295 aa		3.57	□□□□□ -1.84
PPP4R1-209	ENST00000578329	ZDHHC23	Q8IYP9	409 aa		3.57	□□□□□ -1.84
PPP4R1-209	ENST00000578329	ZNF679	Q8IYX0	411 aa		3.57	□□□□□ -1.84
PPP4R1-209	ENST00000578329	RDH10	Q8IZV5	341 aa		3.57	□□□□□ -1.84
PPP4R1-209	ENST00000578329	TPRX1	Q8N7U7	411 aa		3.57	□□□□□ -1.84
PPP4R1-209	ENST00000578329	ZNF454	Q8N9F8	522 aa		3.57	□□□□□ -1.84
PPP4R1-209	ENST00000578329	OR5A2	Q8NGI9	324 aa		3.57	□□□□□ -1.84
PPP4R1-209	ENST00000578329	TEX47	Q8TBZ9	253 aa		3.57	□□□□□ -1.84
PPP4R1-209	ENST00000578329	NPRL2	Q8WTW4	380 aa		3.57	□□□□□ -1.84
PPP4R1-209	ENST00000578329	THEM6	Q8WUY1	208 aa		3.57	□□□□□ -1.84
PPP4R1-209	ENST00000578329	H1FX	Q92522	213 aa	Known RBP	3.57	□□□□□ -1.84
PPP4R1-209	ENST00000578329	MCUR1	Q96AQ8	359 aa		3.57	□□□□□ -1.84
PPP4R1-209	ENST00000578329	MICU1	Q9BPX6	476 aa		3.57	□□□□□ -1.84
PPP4R1-209	ENST00000578329	RTL8A	Q9BWD3	113 aa		3.57	□□□□□ -1.84
PPP4R1-209	ENST00000578329	CADM1	Q9BY67	442 aa	Known RBP	3.57	□□□□□ -1.84
PPP4R1-209	ENST00000578329	YIPF3	Q9GZM5	350 aa		3.57	□□□□□ -1.84
PPP4R1-209	ENST00000578329	C1orf21	Q9H246	121 aa		3.57	□□□□□ -1.84
PPP4R1-209	ENST00000578329	METTL8	Q9H825	291 aa	Known RBP	3.57	□□□□□ -1.84
PPP4R1-209	ENST00000578329	KRCC1	Q9NPI7	259 aa	Predicted RBP	3.57	□□□□□ -1.84
PPP4R1-209	ENST00000578329	GPR173	Q9NS66	373 aa		3.57	□□□□□ -1.84
PPP4R1-209	ENST00000578329	AASS	Q9UDR5	926 aa		3.57	□□□□□ -1.84
PPP4R1-209	ENST00000578329	POMP	Q9Y244	141 aa		3.57	□□□□□ -1.84
PPP4R1-209	ENST00000578329	PIGL	Q9Y2B2	252 aa		3.57	□□□□□ -1.84
PPP4R1-209	ENST00000578329	TRBV23-1	A0A0A0MS06	115 aa		3.56	□□□□□ -1.84
PPP4R1-209	ENST00000578329	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	3.56	□□□□□ -1.84
PPP4R1-209	ENST00000578329		A0A1W2PQL4	384 aa	Predicted RBP	3.56	□□□□□ -1.84
PPP4R1-209	ENST00000578329	ACOD1	A6NK06	481 aa		3.56	□□□□□ -1.84
PPP4R1-209	ENST00000578329	SH2D7	A6NKC9	451 aa	Predicted RBP	3.56	□□□□□ -1.84
PPP4R1-209	ENST00000578329	OR5B21	A6NL26	309 aa		3.56	□□□□□ -1.84
PPP4R1-209	ENST00000578329	PRR23D1	E9PI22	279 aa	Predicted RBP	3.56	□□□□□ -1.84
PPP4R1-209	ENST00000578329		H3BN98	237 aa		3.56	□□□□□ -1.84
PPP4R1-209	ENST00000578329	LY6L	H3BQJ8	138 aa		3.56	□□□□□ -1.84
PPP4R1-209	ENST00000578329		J3QT63	122 aa		3.56	□□□□□ -1.84
PPP4R1-209	ENST00000578329		K7EIL1	84 aa		3.56	□□□□□ -1.84
PPP4R1-209	ENST00000578329		M0QZ24	198 aa		3.56	□□□□□ -1.84
PPP4R1-209	ENST00000578329	ANGPTL7	O43827	346 aa		3.56	□□□□□ -1.84
PPP4R1-209	ENST00000578329	DHRS3	O75911	302 aa		3.56	□□□□□ -1.84
PPP4R1-209	ENST00000578329	IFNG	P01579	166 aa		3.56	□□□□□ -1.84
PPP4R1-209	ENST00000578329	TK1	P04183	234 aa		3.56	□□□□□ -1.84
PPP4R1-209	ENST00000578329	PRR23D2	P0DMB1	279 aa	Predicted RBP	3.56	□□□□□ -1.84
PPP4R1-209	ENST00000578329	CALCB	P10092	127 aa		3.56	□□□□□ -1.84
PPP4R1-209	ENST00000578329	PIP	P12273	146 aa	Predicted RBP	3.56	□□□□□ -1.84
PPP4R1-209	ENST00000578329	NDUFB7	P17568	137 aa		3.56	□□□□□ -1.84
PPP4R1-209	ENST00000578329	CALB2	P22676	271 aa		3.56	□□□□□ -1.84
PPP4R1-209	ENST00000578329	GLRA1	P23415	457 aa		3.56	□□□□□ -1.84
PPP4R1-209	ENST00000578329	COX7A1	P24310	79 aa		3.56	□□□□□ -1.84
PPP4R1-209	ENST00000578329	CD24	P25063	80 aa		3.56	□□□□□ -1.84

Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms