RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 DRD3P35462 400 aa11.66□□□□□ -0.54
PCDHGB3-201ENST00000576222 CD81P60033 236 aa11.66□□□□□ -0.54
PCDHGB3-201ENST00000576222 SLC36A1Q7Z2H8 476 aa11.66□□□□□ -0.54
PCDHGB3-201ENST00000576222 C20orf196Q8IYI0 205 aa11.66□□□□□ -0.54
PCDHGB3-201ENST00000576222 GCNT2Q8N0V5 402 aa11.66□□□□□ -0.54
PCDHGB3-201ENST00000576222 BHLHE23Q8NDY6 225 aa11.66□□□□□ -0.54
PCDHGB3-201ENST00000576222 MSI2Q96DH6 328 aaKnown RBP11.66□□□□□ -0.54
PCDHGB3-201ENST00000576222 MVB12AQ96EY5 273 aa11.66□□□□□ -0.54
PCDHGB3-201ENST00000576222 FAM103A1Q9BTL3 118 aaKnown RBP11.66□□□□□ -0.54
PCDHGB3-201ENST00000576222 COL4A5P29400 1685 aa11.66□□□□□ -0.54
PCDHGB3-201ENST00000576222 MGST1P10620 155 aaKnown RBP11.66□□□□□ -0.54
PCDHGB3-201ENST00000576222 PTGER4P35408 488 aa11.66□□□□□ -0.54
PCDHGB3-201ENST00000576222 GALR1P47211 349 aa11.66□□□□□ -0.54
PCDHGB3-201ENST00000576222 CAPZBP47756 277 aa11.66□□□□□ -0.54
PCDHGB3-201ENST00000576222 LBX1P52954 281 aa11.66□□□□□ -0.54
PCDHGB3-201ENST00000576222 POLR2GP62487 172 aaKnown RBP eCLIP11.66□□□□□ -0.54
PCDHGB3-201ENST00000576222 LTC4SQ16873 150 aa11.66□□□□□ -0.54
PCDHGB3-201ENST00000576222 ZNF808Q8N4W9 903 aaPredicted RBP11.66□□□□□ -0.54
PCDHGB3-201ENST00000576222 OR4A16Q8NH70 328 aa11.66□□□□□ -0.54
PCDHGB3-201ENST00000576222 SPSB1Q96BD6 273 aa11.66□□□□□ -0.54
PCDHGB3-201ENST00000576222 SIRT7Q9NRC8 400 aa11.66□□□□□ -0.54
PCDHGB3-201ENST00000576222 ANKRD10Q9NXR5 420 aa11.66□□□□□ -0.54
PCDHGB3-201ENST00000576222 OTOL1A6NHN0 477 aaPredicted RBP11.66□□□□□ -0.54
PCDHGB3-201ENST00000576222 ALG1L2C9J202 215 aa11.66□□□□□ -0.54
PCDHGB3-201ENST00000576222 DEGS1O15121 323 aa11.66□□□□□ -0.54
PCDHGB3-201ENST00000576222 ADAM20O43506 726 aa11.66□□□□□ -0.54
PCDHGB3-201ENST00000576222 UPK3AO75631 287 aa11.66□□□□□ -0.54
PCDHGB3-201ENST00000576222 CST2P09228 141 aa11.66□□□□□ -0.54
PCDHGB3-201ENST00000576222 FUT3P21217 361 aa11.66□□□□□ -0.54
PCDHGB3-201ENST00000576222 LHX8Q68G74 356 aa11.66□□□□□ -0.54
PCDHGB3-201ENST00000576222 ANKRD33Q7Z3H0 272 aa11.66□□□□□ -0.54
PCDHGB3-201ENST00000576222 OR2AE1Q8NHA4 323 aa11.66□□□□□ -0.54
PCDHGB3-201ENST00000576222 HIPK2Q9H2X6 1198 aa11.66□□□□□ -0.54
PCDHGB3-201ENST00000576222 KCNIP2Q9NS61 270 aa11.66□□□□□ -0.54
PCDHGB3-201ENST00000576222 ZNF814B7Z6K7 855 aa11.65□□□□□ -0.54
PCDHGB3-201ENST00000576222 NTF3P20783 257 aa11.65□□□□□ -0.54
PCDHGB3-201ENST00000576222 PHOSPHO2Q8TCD6 241 aa11.65□□□□□ -0.54
PCDHGB3-201ENST00000576222 MS4A10Q96PG2 267 aa11.65□□□□□ -0.54
PCDHGB3-201ENST00000576222 PECRQ9BY49 303 aa11.65□□□□□ -0.54
PCDHGB3-201ENST00000576222 NOSIPQ9Y314 301 aaKnown RBP11.65□□□□□ -0.54
PCDHGB3-201ENST00000576222 ANKUB1A6NFN9 424 aa11.65□□□□□ -0.54
PCDHGB3-201ENST00000576222 CYR61O00622 381 aa11.65□□□□□ -0.54
PCDHGB3-201ENST00000576222 NXPH2O95156 264 aa11.65□□□□□ -0.54
PCDHGB3-201ENST00000576222 DUSP3P51452 185 aaPredicted RBP11.65□□□□□ -0.54
PCDHGB3-201ENST00000576222 GFERP55789 205 aa11.65□□□□□ -0.54
PCDHGB3-201ENST00000576222 OR1D5P58170 312 aa11.65□□□□□ -0.54
PCDHGB3-201ENST00000576222 TPPP2P59282 170 aa11.65□□□□□ -0.54
PCDHGB3-201ENST00000576222 SUMO1P63165 101 aaKnown RBP11.65□□□□□ -0.54
PCDHGB3-201ENST00000576222 C2orf68Q2NKX9 166 aa11.65□□□□□ -0.54
PCDHGB3-201ENST00000576222 TMEM196Q5HYL7 178 aa11.65□□□□□ -0.54
PCDHGB3-201ENST00000576222 TSPO2Q5TGU0 170 aa11.65□□□□□ -0.54
PCDHGB3-201ENST00000576222 SSX7Q7RTT5 188 aa11.65□□□□□ -0.54
PCDHGB3-201ENST00000576222 H2BFWTQ7Z2G1 175 aa11.65□□□□□ -0.54
PCDHGB3-201ENST00000576222 CA5BP1Q8WTZ4 195 aa11.65□□□□□ -0.54
PCDHGB3-201ENST00000576222 MYOTQ9UBF9 498 aa11.65□□□□□ -0.54
PCDHGB3-201ENST00000576222 KCNK7Q9Y2U2 307 aa11.65□□□□□ -0.54
PCDHGB3-201ENST00000576222 TRAPPC1Q9Y5R8 145 aa11.65□□□□□ -0.54
PCDHGB3-201ENST00000576222 IGKV1-8A0A0C4DH67 115 aa11.65□□□□□ -0.54
PCDHGB3-201ENST00000576222 TMEM229AB2RXF0 380 aa11.65□□□□□ -0.54
PCDHGB3-201ENST00000576222 MASP2O00187 686 aa11.65□□□□□ -0.54
PCDHGB3-201ENST00000576222 FOLR3P41439 243 aa11.65□□□□□ -0.54
PCDHGB3-201ENST00000576222 SSR4P51571 173 aa11.65□□□□□ -0.54
PCDHGB3-201ENST00000576222 SUMO3P55854 103 aaPredicted RBP11.65□□□□□ -0.54
PCDHGB3-201ENST00000576222 PPP1CBP62140 327 aa11.65□□□□□ -0.54
PCDHGB3-201ENST00000576222 FAM3AP98173 230 aa11.65□□□□□ -0.54
PCDHGB3-201ENST00000576222 C17orf78Q8N4C9 275 aa11.65□□□□□ -0.54
PCDHGB3-201ENST00000576222 VAMP8Q9BV40 100 aa11.65□□□□□ -0.54
PCDHGB3-201ENST00000576222 LMAN1LQ9HAT1 526 aa11.65□□□□□ -0.54
PCDHGB3-201ENST00000576222 GNG12Q9UBI6 72 aa11.65□□□□□ -0.54
PCDHGB3-201ENST00000576222 ANXA10Q9UJ72 324 aa11.65□□□□□ -0.54
PCDHGB3-201ENST00000576222 TIMM10BQ9Y5J6 103 aa11.65□□□□□ -0.54
PCDHGB3-201ENST00000576222 CLEC18AA5D8T8 446 aa11.65□□□□□ -0.55
PCDHGB3-201ENST00000576222 CD8AP01732 235 aa11.65□□□□□ -0.55
PCDHGB3-201ENST00000576222 NKAIN1Q4KMZ8 207 aa11.65□□□□□ -0.55
PCDHGB3-201ENST00000576222 PARM1Q6UWI2 310 aa11.65□□□□□ -0.55
PCDHGB3-201ENST00000576222 LINC00469Q8N7U9 141 aa11.65□□□□□ -0.55
PCDHGB3-201ENST00000576222 CLEC18CQ8NCF0 446 aa11.65□□□□□ -0.55
PCDHGB3-201ENST00000576222 HIST1H2BAQ96A08 127 aa11.65□□□□□ -0.55
PCDHGB3-201ENST00000576222 VPS25Q9BRG1 176 aa11.65□□□□□ -0.55
PCDHGB3-201ENST00000576222 SLC26A1Q9H2B4 701 aa11.65□□□□□ -0.55
PCDHGB3-201ENST00000576222 OBP2BQ9NPH6 170 aa11.65□□□□□ -0.55
PCDHGB3-201ENST00000576222 C3orf85A0A1B0GTC6 90 aa11.64□□□□□ -0.55
PCDHGB3-201ENST00000576222 MAP1LC3B2A6NCE7 125 aa11.64□□□□□ -0.55
PCDHGB3-201ENST00000576222 B4DEV8 164 aa11.64□□□□□ -0.55
PCDHGB3-201ENST00000576222 DHRS3O75911 302 aa11.64□□□□□ -0.55
PCDHGB3-201ENST00000576222 GAPDHP04406 335 aaKnown RBP11.64□□□□□ -0.55
PCDHGB3-201ENST00000576222 HNF1AP20823 631 aa11.64□□□□□ -0.55
PCDHGB3-201ENST00000576222 PDCD1Q15116 288 aa11.64□□□□□ -0.55
PCDHGB3-201ENST00000576222 ABHD17BQ5VST6 288 aa11.64□□□□□ -0.55
PCDHGB3-201ENST00000576222 OR6C1Q96RD1 312 aa11.64□□□□□ -0.55
PCDHGB3-201ENST00000576222 MAP1LC3BQ9GZQ8 125 aa11.64□□□□□ -0.55
PCDHGB3-201ENST00000576222 METTL12A8MUP2 240 aa11.64□□□□□ -0.55
PCDHGB3-201ENST00000576222 HRKO00198 91 aa11.64□□□□□ -0.55
PCDHGB3-201ENST00000576222 KLF4O43474 513 aa11.64□□□□□ -0.55
PCDHGB3-201ENST00000576222 LPAR6P43657 344 aa11.64□□□□□ -0.55
PCDHGB3-201ENST00000576222 KRTDAPP60985 99 aa11.64□□□□□ -0.55
PCDHGB3-201ENST00000576222 HFEQ30201 348 aa11.64□□□□□ -0.55
PCDHGB3-201ENST00000576222 DAZAP1Q96EP5 407 aaKnown RBP11.64□□□□□ -0.55
PCDHGB3-201ENST00000576222 ZNF331Q9NQX6 463 aaPredicted RBP11.64□□□□□ -0.55
PCDHGB3-201ENST00000576222 TRBV5-7A0A0A0MS05 114 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms