RNA–Protein interactions for RNA: ENST00000576012.5

SCARF1-209, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 3,292 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-209ENST00000576012 HIST1H2BOP23527 126 aa12.8□□□□□ -0.36
SCARF1-209ENST00000576012 HIST1H2BBP33778 126 aa12.8□□□□□ -0.36
SCARF1-209ENST00000576012 THBS4P35443 961 aa12.8□□□□□ -0.36
SCARF1-209ENST00000576012 PIGPP57054 158 aa12.8□□□□□ -0.36
SCARF1-209ENST00000576012 SLC26A5P58743 744 aa12.8□□□□□ -0.36
SCARF1-209ENST00000576012 HIST1H2BDP58876 126 aa12.8□□□□□ -0.36
SCARF1-209ENST00000576012 HIST1H2BCP62807 126 aa12.8□□□□□ -0.36
SCARF1-209ENST00000576012 HIST2H2BEQ16778 126 aa12.8□□□□□ -0.36
SCARF1-209ENST00000576012 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.8□□□□□ -0.36
SCARF1-209ENST00000576012 FNDC7Q5VTL7 733 aa12.8□□□□□ -0.36
SCARF1-209ENST00000576012 HEPN1Q6WQI6 88 aa12.8□□□□□ -0.36
SCARF1-209ENST00000576012 TMEM123Q8N131 208 aa12.8□□□□□ -0.36
SCARF1-209ENST00000576012 OR13H1Q8NG92 308 aa12.8□□□□□ -0.36
SCARF1-209ENST00000576012 PTPMT1Q8WUK0 201 aaPredicted RBP12.8□□□□□ -0.36
SCARF1-209ENST00000576012 HIST1H2BHQ93079 126 aa12.8□□□□□ -0.36
SCARF1-209ENST00000576012 MISP3Q96FF7 219 aa12.8□□□□□ -0.36
SCARF1-209ENST00000576012 SNX22Q96L94 193 aa12.8□□□□□ -0.36
SCARF1-209ENST00000576012 HIST1H2BNQ99877 126 aa12.8□□□□□ -0.36
SCARF1-209ENST00000576012 HIST1H2BMQ99879 126 aa12.8□□□□□ -0.36
SCARF1-209ENST00000576012 OR10A2Q9H208 303 aa12.8□□□□□ -0.36
SCARF1-209ENST00000576012 PADI1Q9ULC6 663 aa12.8□□□□□ -0.36
SCARF1-209ENST00000576012 HDGFL3Q9Y3E1 203 aa12.8□□□□□ -0.36
SCARF1-209ENST00000576012 SDK2Q58EX2 2172 aa12.79□□□□□ -0.36
SCARF1-209ENST00000576012 BORCS7-ASMTA0A0B4J1R7 106 aa12.79□□□□□ -0.36
SCARF1-209ENST00000576012 F5H5K5 113 aa12.79□□□□□ -0.36
SCARF1-209ENST00000576012 PLRG1O43660 514 aaKnown RBP12.79□□□□□ -0.36
SCARF1-209ENST00000576012 ANGPTL7O43827 346 aa12.79□□□□□ -0.36
SCARF1-209ENST00000576012 CTSEP14091 401 aa12.79□□□□□ -0.36
SCARF1-209ENST00000576012 RPS2P15880 293 aaKnown RBP12.79□□□□□ -0.36
SCARF1-209ENST00000576012 RAC1P63000 192 aa12.79□□□□□ -0.36
SCARF1-209ENST00000576012 RPP30P78346 268 aaKnown RBP12.79□□□□□ -0.36
SCARF1-209ENST00000576012 FUT7Q11130 342 aa12.79□□□□□ -0.36
SCARF1-209ENST00000576012 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.79□□□□□ -0.36
SCARF1-209ENST00000576012 OPN5Q6U736 354 aa12.79□□□□□ -0.36
SCARF1-209ENST00000576012 ZNF283Q8N7M2 679 aa12.79□□□□□ -0.36
SCARF1-209ENST00000576012 OR11L1Q8NGX0 322 aa12.79□□□□□ -0.36
SCARF1-209ENST00000576012 KCNG3Q8TAE7 436 aa12.79□□□□□ -0.36
SCARF1-209ENST00000576012 STT3BQ8TCJ2 826 aa12.79□□□□□ -0.36
SCARF1-209ENST00000576012 TAAR9Q96RI9 348 aa12.79□□□□□ -0.36
SCARF1-209ENST00000576012 ZNF107Q9UII5 783 aaPredicted RBP12.79□□□□□ -0.36
SCARF1-209ENST00000576012 HSF4Q9ULV5 492 aa12.79□□□□□ -0.36
SCARF1-209ENST00000576012 LOC390937A0A1W2PQ73 354 aa12.79□□□□□ -0.36
SCARF1-209ENST00000576012 FAM221BA6H8Z2 402 aa12.79□□□□□ -0.36
SCARF1-209ENST00000576012 FAM24AA6NFZ4 105 aa12.79□□□□□ -0.36
SCARF1-209ENST00000576012 SOX15O60248 233 aa12.79□□□□□ -0.36
SCARF1-209ENST00000576012 SRSF10O75494 262 aaKnown RBP12.79□□□□□ -0.36
SCARF1-209ENST00000576012 SCAF4O95104 1147 aaKnown RBP12.79□□□□□ -0.36
SCARF1-209ENST00000576012 F10P00742 488 aa12.79□□□□□ -0.36
SCARF1-209ENST00000576012 HPNP05981 417 aa12.79□□□□□ -0.36
SCARF1-209ENST00000576012 ZNF121P58317 390 aaPredicted RBP12.79□□□□□ -0.36
SCARF1-209ENST00000576012 NKAIN1Q4KMZ8 207 aa12.79□□□□□ -0.36
SCARF1-209ENST00000576012 ABCA11PQ4W5N1 156 aa12.79□□□□□ -0.36
SCARF1-209ENST00000576012 C1orf189Q5VU69 101 aa12.79□□□□□ -0.36
SCARF1-209ENST00000576012 ADAM19Q9H013 955 aa12.79□□□□□ -0.36
SCARF1-209ENST00000576012 FAM206AQ9NX38 181 aa12.79□□□□□ -0.36
SCARF1-209ENST00000576012 NUP210LQ5VU65 1888 aa12.79□□□□□ -0.36
SCARF1-209ENST00000576012 CCDC85CA6NKD9 419 aa12.79□□□□□ -0.36
SCARF1-209ENST00000576012 GEMIN2O14893 280 aaKnown RBP12.79□□□□□ -0.36
SCARF1-209ENST00000576012 CST7O76096 145 aa12.79□□□□□ -0.36
SCARF1-209ENST00000576012 DANCRP0C864 163 aa12.79□□□□□ -0.36
SCARF1-209ENST00000576012 PGCP20142 388 aa12.79□□□□□ -0.36
SCARF1-209ENST00000576012 DLK1P80370 383 aa12.79□□□□□ -0.36
SCARF1-209ENST00000576012 RUNX1Q01196 453 aa12.79□□□□□ -0.36
SCARF1-209ENST00000576012 HMGN3Q15651 99 aa12.79□□□□□ -0.36
SCARF1-209ENST00000576012 NUP54Q7Z3B4 507 aa12.79□□□□□ -0.36
SCARF1-209ENST00000576012 C5orf24Q7Z6I8 188 aa12.79□□□□□ -0.36
SCARF1-209ENST00000576012 DEFB119Q8N690 84 aa12.79□□□□□ -0.36
SCARF1-209ENST00000576012 CYB561D1Q8N8Q1 229 aa12.79□□□□□ -0.36
SCARF1-209ENST00000576012 C19orf47Q8N9M1 422 aaKnown RBP12.79□□□□□ -0.36
SCARF1-209ENST00000576012 OR10S1Q8NGN2 331 aa12.79□□□□□ -0.36
SCARF1-209ENST00000576012 OR2G3Q8NGZ4 309 aa12.79□□□□□ -0.36
SCARF1-209ENST00000576012 TMEM68Q96MH6 324 aa12.79□□□□□ -0.36
SCARF1-209ENST00000576012 PBDC1Q9BVG4 233 aa12.79□□□□□ -0.36
SCARF1-209ENST00000576012 TUBG1P23258 451 aa12.78□□□□□ -0.36
SCARF1-209ENST00000576012 AKR1C8PQ5T2L2 129 aa12.78□□□□□ -0.36
SCARF1-209ENST00000576012 FBXW12Q6X9E4 464 aa12.78□□□□□ -0.36
SCARF1-209ENST00000576012 LYPD6Q86Y78 171 aa12.78□□□□□ -0.36
SCARF1-209ENST00000576012 LIPHQ8WWY8 451 aa12.78□□□□□ -0.36
SCARF1-209ENST00000576012 ZDHHC12Q96GR4 267 aa12.78□□□□□ -0.36
SCARF1-209ENST00000576012 PLEKHJ1Q9NW61 149 aa12.78□□□□□ -0.36
SCARF1-209ENST00000576012 MCTS1Q9ULC4 181 aaKnown RBP12.78□□□□□ -0.36
SCARF1-209ENST00000576012 KLF8O95600 359 aaPredicted RBP12.78□□□□□ -0.36
SCARF1-209ENST00000576012 CFPP27918 469 aa12.78□□□□□ -0.36
SCARF1-209ENST00000576012 DDTP30046 118 aa12.78□□□□□ -0.36
SCARF1-209ENST00000576012 RHEBQ15382 184 aa12.78□□□□□ -0.36
SCARF1-209ENST00000576012 TGIF2LXQ8IUE1 241 aa12.78□□□□□ -0.36
SCARF1-209ENST00000576012 OR5AS1Q8N127 324 aa12.78□□□□□ -0.36
SCARF1-209ENST00000576012 GTF3AQ92664 365 aaKnown RBP12.78□□□□□ -0.36
SCARF1-209ENST00000576012 HOXB13Q92826 284 aaPredicted RBP12.78□□□□□ -0.36
SCARF1-209ENST00000576012 SCGB3A2Q96PL1 93 aa12.78□□□□□ -0.36
SCARF1-209ENST00000576012 URM1Q9BTM9 101 aaKnown RBP12.78□□□□□ -0.36
SCARF1-209ENST00000576012 LANCL2Q9NS86 450 aa12.78□□□□□ -0.36
SCARF1-209ENST00000576012 SLC7A11Q9UPY5 501 aa12.78□□□□□ -0.36
SCARF1-209ENST00000576012 OSGIN2Q9Y236 505 aa12.78□□□□□ -0.36
SCARF1-209ENST00000576012 A0A1B0GWJ7 208 aa12.77□□□□□ -0.36
SCARF1-209ENST00000576012 RAC2P15153 192 aa12.77□□□□□ -0.36
SCARF1-209ENST00000576012 APOBEC1P41238 236 aaKnown RBP12.77□□□□□ -0.36
SCARF1-209ENST00000576012 GFERP55789 205 aa12.77□□□□□ -0.36
SCARF1-209ENST00000576012 TAF9Q16594 264 aa12.77□□□□□ -0.36
SCARF1-209ENST00000576012 OR8B12Q8NGG6 310 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms