RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 ACTA1P68133 377 aa12.92□□□□□ -0.34
CTDNEP1-211ENST00000575783 LIPEQ05469 1076 aa12.92□□□□□ -0.34
CTDNEP1-211ENST00000575783 KRT72Q14CN4 511 aa12.92□□□□□ -0.34
CTDNEP1-211ENST00000575783 SMIM21Q3B7S5 101 aa12.92□□□□□ -0.34
CTDNEP1-211ENST00000575783 MINOS1Q5TGZ0 78 aa12.92□□□□□ -0.34
CTDNEP1-211ENST00000575783 METTL21CQ5VZV1 264 aa12.92□□□□□ -0.34
CTDNEP1-211ENST00000575783 HAGHLQ6PII5 290 aaPredicted RBP12.92□□□□□ -0.34
CTDNEP1-211ENST00000575783 OR2W3Q7Z3T1 314 aa12.92□□□□□ -0.34
CTDNEP1-211ENST00000575783 AQP3Q92482 292 aa12.92□□□□□ -0.34
CTDNEP1-211ENST00000575783 FAM162AQ96A26 154 aa12.92□□□□□ -0.34
CTDNEP1-211ENST00000575783 P2RX4Q99571 388 aa12.92□□□□□ -0.34
CTDNEP1-211ENST00000575783 SLC25A33Q9BSK2 321 aa12.92□□□□□ -0.34
CTDNEP1-211ENST00000575783 MYLK2Q9H1R3 596 aa12.92□□□□□ -0.34
CTDNEP1-211ENST00000575783 OR14J1Q9UGF5 321 aa12.92□□□□□ -0.34
CTDNEP1-211ENST00000575783 MINOS1-NBL1R4GNA1 71 aa12.92□□□□□ -0.34
CTDNEP1-211ENST00000575783 PGA5P0DJD9 388 aa12.91□□□□□ -0.34
CTDNEP1-211ENST00000575783 TEX30Q5JUR7 227 aa12.91□□□□□ -0.34
CTDNEP1-211ENST00000575783 KLHL30-AS1Q8NEE0 82 aa12.91□□□□□ -0.34
CTDNEP1-211ENST00000575783 OR6K6Q8NGW6 343 aa12.91□□□□□ -0.34
CTDNEP1-211ENST00000575783 FUZQ9BT04 418 aa12.91□□□□□ -0.34
CTDNEP1-211ENST00000575783 TBC1D23Q9NUY8 699 aa12.91□□□□□ -0.34
CTDNEP1-211ENST00000575783 AMY1AP04745 511 aa12.9□□□□□ -0.34
CTDNEP1-211ENST00000575783 AMY2AP04746 511 aa12.9□□□□□ -0.34
CTDNEP1-211ENST00000575783 SNRNP70P08621 437 aaKnown RBP12.9□□□□□ -0.34
CTDNEP1-211ENST00000575783 NCK1P16333 377 aa12.9□□□□□ -0.34
CTDNEP1-211ENST00000575783 EDDM3BP56851 147 aa12.9□□□□□ -0.34
CTDNEP1-211ENST00000575783 KLF10Q13118 480 aa12.9□□□□□ -0.34
CTDNEP1-211ENST00000575783 IL18R1Q13478 541 aa12.9□□□□□ -0.34
CTDNEP1-211ENST00000575783 ADAMTSL5Q6ZMM2 481 aa12.9□□□□□ -0.34
CTDNEP1-211ENST00000575783 SBSPONQ8IVN8 264 aa12.9□□□□□ -0.34
CTDNEP1-211ENST00000575783 BATF2Q8N1L9 274 aa12.9□□□□□ -0.34
CTDNEP1-211ENST00000575783 SLC37A3Q8NCC5 494 aa12.9□□□□□ -0.34
CTDNEP1-211ENST00000575783 OR8B4Q96RC9 309 aa12.9□□□□□ -0.34
CTDNEP1-211ENST00000575783 ABHD6Q9BV23 337 aa12.9□□□□□ -0.34
CTDNEP1-211ENST00000575783 EGLN3Q9H6Z9 239 aa12.9□□□□□ -0.34
CTDNEP1-211ENST00000575783 CD300AQ9UGN4 299 aa12.9□□□□□ -0.34
CTDNEP1-211ENST00000575783 OR2F2O95006 317 aa12.89□□□□□ -0.35
CTDNEP1-211ENST00000575783 RBP4P02753 201 aa12.89□□□□□ -0.35
CTDNEP1-211ENST00000575783 H2BFMP0C1H6 154 aa12.89□□□□□ -0.35
CTDNEP1-211ENST00000575783 BRS3P32247 399 aa12.89□□□□□ -0.35
CTDNEP1-211ENST00000575783 GP2P55259 537 aaKnown RBP12.89□□□□□ -0.35
CTDNEP1-211ENST00000575783 CBX1P83916 185 aa12.89□□□□□ -0.35
CTDNEP1-211ENST00000575783 CEACAM21Q3KPI0 293 aa12.89□□□□□ -0.35
CTDNEP1-211ENST00000575783 SLC15A3Q8IY34 581 aa12.89□□□□□ -0.35
CTDNEP1-211ENST00000575783 ZNF676Q8N7Q3 588 aa12.89□□□□□ -0.35
CTDNEP1-211ENST00000575783 POC1AQ8NBT0 407 aa12.89□□□□□ -0.35
CTDNEP1-211ENST00000575783 FAM81AQ8TBF8 368 aa12.89□□□□□ -0.35
CTDNEP1-211ENST00000575783 RNF133Q8WVZ7 376 aa12.89□□□□□ -0.35
CTDNEP1-211ENST00000575783 C7orf34Q96L11 122 aa12.89□□□□□ -0.35
CTDNEP1-211ENST00000575783 RBM14Q96PK6 669 aaKnown RBP12.89□□□□□ -0.35
CTDNEP1-211ENST00000575783 CDRT15Q96T59 188 aa12.89□□□□□ -0.35
CTDNEP1-211ENST00000575783 AMELYQ99218 206 aa12.89□□□□□ -0.35
CTDNEP1-211ENST00000575783 RAB21Q9UL25 225 aa12.89□□□□□ -0.35
CTDNEP1-211ENST00000575783 IGHV2-26A0A0B4J1V2 119 aa12.88□□□□□ -0.35
CTDNEP1-211ENST00000575783 NXPH2O95156 264 aa12.88□□□□□ -0.35
CTDNEP1-211ENST00000575783 GADD45GO95257 159 aa12.88□□□□□ -0.35
CTDNEP1-211ENST00000575783 CLUP10909 449 aa12.88□□□□□ -0.35
CTDNEP1-211ENST00000575783 HTR1DP28221 377 aa12.88□□□□□ -0.35
CTDNEP1-211ENST00000575783 OPRL1P41146 370 aa12.88□□□□□ -0.35
CTDNEP1-211ENST00000575783 MAPRE2Q15555 327 aa12.88□□□□□ -0.35
CTDNEP1-211ENST00000575783 C9orf66Q5T8R8 295 aa12.88□□□□□ -0.35
CTDNEP1-211ENST00000575783 MOB3CQ70IA8 216 aa12.88□□□□□ -0.35
CTDNEP1-211ENST00000575783 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.88□□□□□ -0.35
CTDNEP1-211ENST00000575783 ASCC1Q8N9N2 400 aaKnown RBP12.88□□□□□ -0.35
CTDNEP1-211ENST00000575783 OR52L1Q8NGH7 329 aa12.88□□□□□ -0.35
CTDNEP1-211ENST00000575783 OR6N2Q8NGY6 317 aa12.88□□□□□ -0.35
CTDNEP1-211ENST00000575783 DHRS1Q96LJ7 313 aa12.88□□□□□ -0.35
CTDNEP1-211ENST00000575783 ZNF714Q96N38 554 aa12.88□□□□□ -0.35
CTDNEP1-211ENST00000575783 ZFP57Q9NU63 452 aa12.88□□□□□ -0.35
CTDNEP1-211ENST00000575783 AP3M1Q9Y2T2 418 aa12.88□□□□□ -0.35
CTDNEP1-211ENST00000575783 SMAD5-AS1Q9Y6J3 95 aa12.88□□□□□ -0.35
CTDNEP1-211ENST00000575783 CCL24O00175 119 aa12.87□□□□□ -0.35
CTDNEP1-211ENST00000575783 DNAJC8O75937 253 aaPredicted RBP12.87□□□□□ -0.35
CTDNEP1-211ENST00000575783 LY86O95711 162 aa12.87□□□□□ -0.35
CTDNEP1-211ENST00000575783 SPI1P17947 270 aa12.87□□□□□ -0.35
CTDNEP1-211ENST00000575783 SLC6A1P30531 599 aa12.87□□□□□ -0.35
CTDNEP1-211ENST00000575783 IFNGR2P38484 337 aa12.87□□□□□ -0.35
CTDNEP1-211ENST00000575783 OR3A4PP47883 348 aa12.87□□□□□ -0.35
CTDNEP1-211ENST00000575783 GSSP48637 474 aa12.87□□□□□ -0.35
CTDNEP1-211ENST00000575783 SMIM11AP58511 58 aa12.87□□□□□ -0.35
CTDNEP1-211ENST00000575783 CRMP1Q14194 572 aa12.87□□□□□ -0.35
CTDNEP1-211ENST00000575783 PLBD1Q6P4A8 553 aa12.87□□□□□ -0.35
CTDNEP1-211ENST00000575783 GDPD3Q7L5L3 318 aa12.87□□□□□ -0.35
CTDNEP1-211ENST00000575783 ERI1Q8IV48 349 aaKnown RBP12.87□□□□□ -0.35
CTDNEP1-211ENST00000575783 ZNF695Q8IW36 515 aa12.87□□□□□ -0.35
CTDNEP1-211ENST00000575783 OR5A2Q8NGI9 324 aa12.87□□□□□ -0.35
CTDNEP1-211ENST00000575783 GNPDA2Q8TDQ7 276 aa12.87□□□□□ -0.35
CTDNEP1-211ENST00000575783 RCN3Q96D15 328 aa12.87□□□□□ -0.35
CTDNEP1-211ENST00000575783 RAX2Q96IS3 184 aa12.87□□□□□ -0.35
CTDNEP1-211ENST00000575783 NOL4LQ96MY1 436 aaPredicted RBP12.87□□□□□ -0.35
CTDNEP1-211ENST00000575783 VIPAS39Q9H9C1 493 aa12.87□□□□□ -0.35
CTDNEP1-211ENST00000575783 NKX1-2Q9UD57 310 aaPredicted RBP12.87□□□□□ -0.35
CTDNEP1-211ENST00000575783 SESN1Q9Y6P5 492 aa12.87□□□□□ -0.35
CTDNEP1-211ENST00000575783 OR5B21A6NL26 309 aa12.86□□□□□ -0.35
CTDNEP1-211ENST00000575783 K7N7A8 449 aa12.86□□□□□ -0.35
CTDNEP1-211ENST00000575783 MAP2K3P46734 347 aa12.86□□□□□ -0.35
CTDNEP1-211ENST00000575783 NUDT2P50583 147 aa12.86□□□□□ -0.35
CTDNEP1-211ENST00000575783 TSPAN31Q12999 210 aa12.86□□□□□ -0.35
CTDNEP1-211ENST00000575783 PLCXD3Q63HM9 321 aa12.86□□□□□ -0.35
CTDNEP1-211ENST00000575783 OVCH2Q7RTZ1 564 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 157.6 ms