RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 CCDC168Q8NDH2 2452 aa14.38□□□□□ -0.11
NUP88-210ENST00000574867 TRAV1-2A0A0B4J238 106 aa14.38□□□□□ -0.11
NUP88-210ENST00000574867 PPIHO43447 177 aaKnown RBP14.38□□□□□ -0.11
NUP88-210ENST00000574867 FSTL3O95633 263 aa14.38□□□□□ -0.11
NUP88-210ENST00000574867 GPR6P46095 362 aaPredicted RBP14.38□□□□□ -0.11
NUP88-210ENST00000574867 POU3F4P49335 361 aa14.38□□□□□ -0.11
NUP88-210ENST00000574867 LRRTM1Q86UE6 522 aa14.38□□□□□ -0.11
NUP88-210ENST00000574867 DCAF16Q9NXF7 216 aa14.38□□□□□ -0.11
NUP88-210ENST00000574867 SRRM5B3KS81 715 aa14.37□□□□□ -0.11
NUP88-210ENST00000574867 AIREO43918 545 aa14.37□□□□□ -0.11
NUP88-210ENST00000574867 RHBDL1O75783 438 aa14.37□□□□□ -0.11
NUP88-210ENST00000574867 LHBP01229 141 aa14.37□□□□□ -0.11
NUP88-210ENST00000574867 ACAA1P09110 424 aaPredicted RBP14.37□□□□□ -0.11
NUP88-210ENST00000574867 SLC25A16P16260 332 aa14.37□□□□□ -0.11
NUP88-210ENST00000574867 PDZK1IP1Q13113 114 aa14.37□□□□□ -0.11
NUP88-210ENST00000574867 SATL1Q86VE3 508 aa14.37□□□□□ -0.11
NUP88-210ENST00000574867 MKXQ8IYA7 352 aa14.37□□□□□ -0.11
NUP88-210ENST00000574867 GCSAMQ8N6F7 178 aa14.37□□□□□ -0.11
NUP88-210ENST00000574867 POC1AQ8NBT0 407 aa14.37□□□□□ -0.11
NUP88-210ENST00000574867 FUNDC2Q9BWH2 189 aa14.37□□□□□ -0.11
NUP88-210ENST00000574867 LOC100506127A0A0U1RQW1 187 aa14.37□□□□□ -0.11
NUP88-210ENST00000574867 SYNGR1O43759 233 aa14.37□□□□□ -0.11
NUP88-210ENST00000574867 NOS1APO75052 506 aaPredicted RBP14.37□□□□□ -0.11
NUP88-210ENST00000574867 PLATP00750 562 aa14.37□□□□□ -0.11
NUP88-210ENST00000574867 PGA5P0DJD9 388 aa14.37□□□□□ -0.11
NUP88-210ENST00000574867 ZP1P60852 638 aa14.37□□□□□ -0.11
NUP88-210ENST00000574867 BTG1P62324 171 aa14.37□□□□□ -0.11
NUP88-210ENST00000574867 GLT8D1Q68CQ7 371 aa14.37□□□□□ -0.11
NUP88-210ENST00000574867 CRIP3Q6Q6R5 217 aa14.37□□□□□ -0.11
NUP88-210ENST00000574867 SLC25A26Q70HW3 274 aa14.37□□□□□ -0.11
NUP88-210ENST00000574867 SAXO1Q8IYX7 474 aa14.37□□□□□ -0.11
NUP88-210ENST00000574867 JAGN1Q8N5M9 183 aa14.37□□□□□ -0.11
NUP88-210ENST00000574867 ZSCAN4Q8NAM6 433 aaPredicted RBP14.37□□□□□ -0.11
NUP88-210ENST00000574867 RFT1Q96AA3 541 aa14.37□□□□□ -0.11
NUP88-210ENST00000574867 TMIGD2Q96BF3 282 aa14.37□□□□□ -0.11
NUP88-210ENST00000574867 FOXRED1Q96CU9 486 aaPredicted RBP14.37□□□□□ -0.11
NUP88-210ENST00000574867 KCTD7Q96MP8 289 aa14.37□□□□□ -0.11
NUP88-210ENST00000574867 UQCC2Q9BRT2 126 aa14.37□□□□□ -0.11
NUP88-210ENST00000574867 BPESC1Q9GZL8 116 aa14.37□□□□□ -0.11
NUP88-210ENST00000574867 WIPI2Q9Y4P8 454 aa14.37□□□□□ -0.11
NUP88-210ENST00000574867 CSMD1Q96PZ7 3565 aa14.36□□□□□ -0.11
NUP88-210ENST00000574867 PPIAL4EA0A075B759 164 aa14.36□□□□□ -0.11
NUP88-210ENST00000574867 VGLL3A8MV65 326 aa14.36□□□□□ -0.11
NUP88-210ENST00000574867 VWC2LB2RUY7 222 aa14.36□□□□□ -0.11
NUP88-210ENST00000574867 PPIAL4DF5H284 164 aa14.36□□□□□ -0.11
NUP88-210ENST00000574867 PDCD5O14737 125 aa14.36□□□□□ -0.11
NUP88-210ENST00000574867 PPIAL4FP0DN26 164 aa14.36□□□□□ -0.11
NUP88-210ENST00000574867 ADRA2CP18825 462 aa14.36□□□□□ -0.11
NUP88-210ENST00000574867 Q8IYB0 196 aa14.36□□□□□ -0.11
NUP88-210ENST00000574867 MUC20Q8N307 709 aaPredicted RBP14.36□□□□□ -0.11
NUP88-210ENST00000574867 OR5D18Q8NGL1 313 aa14.36□□□□□ -0.11
NUP88-210ENST00000574867 ITGB1BP2Q9UKP3 347 aa14.36□□□□□ -0.11
NUP88-210ENST00000574867 PPIAL4AQ9Y536 164 aa14.36□□□□□ -0.11
NUP88-210ENST00000574867 IGHV4-30-2A0A087WSY4 118 aa14.35□□□□□ -0.11
NUP88-210ENST00000574867 IGHV2-70P01814 119 aa14.35□□□□□ -0.11
NUP88-210ENST00000574867 NR4A2P43354 598 aa14.35□□□□□ -0.11
NUP88-210ENST00000574867 MTNR1BP49286 362 aa14.35□□□□□ -0.11
NUP88-210ENST00000574867 PSMD7P51665 324 aa14.35□□□□□ -0.11
NUP88-210ENST00000574867 PXT1Q8NFP0 134 aa14.35□□□□□ -0.11
NUP88-210ENST00000574867 TNFAIP8L1Q8WVP5 186 aa14.35□□□□□ -0.11
NUP88-210ENST00000574867 CEP19Q96LK0 163 aa14.35□□□□□ -0.11
NUP88-210ENST00000574867 Q96MF0 132 aa14.35□□□□□ -0.11
NUP88-210ENST00000574867 NRIP2Q9BQI9 281 aa14.35□□□□□ -0.11
NUP88-210ENST00000574867 RHOFQ9HBH0 211 aa14.35□□□□□ -0.11
NUP88-210ENST00000574867 RASL12Q9NYN1 266 aa14.35□□□□□ -0.11
NUP88-210ENST00000574867 AKR7A2O43488 359 aa14.35□□□□□ -0.11
NUP88-210ENST00000574867 TMEM225BP0DP42 221 aa14.35□□□□□ -0.11
NUP88-210ENST00000574867 MDH2P40926 338 aaKnown RBP14.35□□□□□ -0.11
NUP88-210ENST00000574867 HNRNPA0Q13151 305 aaKnown RBP14.35□□□□□ -0.11
NUP88-210ENST00000574867 RNF144BQ7Z419 303 aa14.35□□□□□ -0.11
NUP88-210ENST00000574867 TPRA1Q86W33 373 aa14.35□□□□□ -0.11
NUP88-210ENST00000574867 LYPD6Q86Y78 171 aa14.35□□□□□ -0.11
NUP88-210ENST00000574867 OR51F2Q8NH61 342 aa14.35□□□□□ -0.11
NUP88-210ENST00000574867 SLAMF9Q96A28 289 aa14.35□□□□□ -0.11
NUP88-210ENST00000574867 CENPOQ9BU64 300 aa14.35□□□□□ -0.11
NUP88-210ENST00000574867 FAM192AQ9GZU8 254 aa14.35□□□□□ -0.11
NUP88-210ENST00000574867 SMURF1Q9HCE7 757 aa14.35□□□□□ -0.11
NUP88-210ENST00000574867 OOEPA6NGQ2 149 aa14.34□□□□□ -0.11
NUP88-210ENST00000574867 TRAPPC2LH3BP13 241 aa14.34□□□□□ -0.11
NUP88-210ENST00000574867 LGALS8O00214 317 aa14.34□□□□□ -0.11
NUP88-210ENST00000574867 SPRY1O43609 319 aaPredicted RBP14.34□□□□□ -0.11
NUP88-210ENST00000574867 EGR1P18146 543 aa14.34□□□□□ -0.11
NUP88-210ENST00000574867 GLRA1P23415 457 aa14.34□□□□□ -0.11
NUP88-210ENST00000574867 PTGFRP43088 359 aa14.34□□□□□ -0.11
NUP88-210ENST00000574867 ZMYND11Q15326 602 aa14.34□□□□□ -0.11
NUP88-210ENST00000574867 KCNJ8Q15842 424 aa14.34□□□□□ -0.11
NUP88-210ENST00000574867 SMIM21Q3B7S5 101 aa14.34□□□□□ -0.11
NUP88-210ENST00000574867 TMEM155Q4W5P6 130 aa14.34□□□□□ -0.11
NUP88-210ENST00000574867 AVPI1Q5T686 147 aa14.34□□□□□ -0.11
NUP88-210ENST00000574867 TEX36Q5VZQ5 186 aa14.34□□□□□ -0.11
NUP88-210ENST00000574867 FAM90A1Q86YD7 464 aa14.34□□□□□ -0.11
NUP88-210ENST00000574867 ANKRD13BQ86YJ7 626 aa14.34□□□□□ -0.11
NUP88-210ENST00000574867 BOLLQ8N9W6 283 aaKnown RBP14.34□□□□□ -0.11
NUP88-210ENST00000574867 C12orf43Q96C57 262 aaKnown RBP14.34□□□□□ -0.11
NUP88-210ENST00000574867 MTCH1Q9NZJ7 389 aa14.34□□□□□ -0.11
NUP88-210ENST00000574867 TRAV38-1A0A0B4J264 116 aa14.34□□□□□ -0.11
NUP88-210ENST00000574867 ISPDA4D126 451 aa14.34□□□□□ -0.11
NUP88-210ENST00000574867 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.34□□□□□ -0.11
NUP88-210ENST00000574867 KDM4BO94953 1096 aa14.34□□□□□ -0.11
NUP88-210ENST00000574867 NXPH2O95156 264 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms