RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 LGALS4P56470 323 aa8.81□□□□□ -1
SMG6-213ENST00000573166 PDCD1Q15116 288 aa8.81□□□□□ -1
SMG6-213ENST00000573166 TEX30Q5JUR7 227 aa8.81□□□□□ -1
SMG6-213ENST00000573166 ABLIM2Q6H8Q1 611 aa8.81□□□□□ -1
SMG6-213ENST00000573166 ZNF767PQ75MW2 155 aa8.81□□□□□ -1
SMG6-213ENST00000573166 GGNQ86UU5 652 aa8.81□□□□□ -1
SMG6-213ENST00000573166 OR51A4Q8NGJ6 313 aa8.81□□□□□ -1
SMG6-213ENST00000573166 LRRC29Q8WV35 223 aa8.81□□□□□ -1
SMG6-213ENST00000573166 MAP6Q96JE9 813 aa8.81□□□□□ -1
SMG6-213ENST00000573166 TAAR6Q96RI8 345 aa8.81□□□□□ -1
SMG6-213ENST00000573166 VKORC1Q9BQB6 163 aa8.81□□□□□ -1
SMG6-213ENST00000573166 NICN1Q9BSH3 213 aa8.81□□□□□ -1
SMG6-213ENST00000573166 ENY2Q9NPA8 101 aa8.81□□□□□ -1
SMG6-213ENST00000573166 A3GALT2U3KPV4 340 aa8.81□□□□□ -1
SMG6-213ENST00000573166 GTF3C1Q12789 2109 aa8.81□□□□□ -1
SMG6-213ENST00000573166 PHF3Q92576 2039 aaKnown RBP8.81□□□□□ -1
SMG6-213ENST00000573166 TERTO14746 1132 aaKnown RBP8.81□□□□□ -1
SMG6-213ENST00000573166 TTRP02766 147 aa8.81□□□□□ -1
SMG6-213ENST00000573166 LPLP06858 475 aa8.81□□□□□ -1
SMG6-213ENST00000573166 PPP3CBP16298 524 aa8.81□□□□□ -1
SMG6-213ENST00000573166 NANOS3P60323 173 aaKnown RBP8.81□□□□□ -1
SMG6-213ENST00000573166 THAP6Q8TBB0 222 aa8.81□□□□□ -1
SMG6-213ENST00000573166 TMEM171Q8WVE6 324 aa8.81□□□□□ -1
SMG6-213ENST00000573166 SECTM1Q8WVN6 248 aa8.81□□□□□ -1
SMG6-213ENST00000573166 NMNAT2Q9BZQ4 307 aa8.81□□□□□ -1
SMG6-213ENST00000573166 CXXC4Q9H2H0 198 aa8.81□□□□□ -1
SMG6-213ENST00000573166 TREM2Q9NZC2 230 aa8.81□□□□□ -1
SMG6-213ENST00000573166 FOXD3Q9UJU5 478 aaPredicted RBP8.81□□□□□ -1
SMG6-213ENST00000573166 A0A0G2JMP0 313 aa8.81□□□□□ -1
SMG6-213ENST00000573166 ROM1Q03395 351 aa8.81□□□□□ -1
SMG6-213ENST00000573166 TIMM23BQ5SRD1 257 aa8.81□□□□□ -1
SMG6-213ENST00000573166 RNLSQ5VYX0 342 aa8.81□□□□□ -1
SMG6-213ENST00000573166 SLC36A1Q7Z2H8 476 aa8.81□□□□□ -1
SMG6-213ENST00000573166 STX12Q86Y82 276 aa8.81□□□□□ -1
SMG6-213ENST00000573166 SGPP2Q8IWX5 399 aa8.81□□□□□ -1
SMG6-213ENST00000573166 Q8IYB0 196 aa8.81□□□□□ -1
SMG6-213ENST00000573166 CMTM4Q8IZR5 234 aa8.81□□□□□ -1
SMG6-213ENST00000573166 OR4M2Q8NGB6 313 aa8.81□□□□□ -1
SMG6-213ENST00000573166 DEDD2Q8WXF8 326 aa8.81□□□□□ -1
SMG6-213ENST00000573166 PLPPR2Q96GM1 343 aa8.81□□□□□ -1
SMG6-213ENST00000573166 CYSLTR2Q9NS75 346 aa8.81□□□□□ -1
SMG6-213ENST00000573166 ELOVL5Q9NYP7 299 aa8.81□□□□□ -1
SMG6-213ENST00000573166 CISD1Q9NZ45 108 aaKnown RBP8.81□□□□□ -1
SMG6-213ENST00000573166 NUP50Q9UKX7 468 aa8.81□□□□□ -1
SMG6-213ENST00000573166 ZNF716A6NP11 495 aa8.81□□□□□ -1
SMG6-213ENST00000573166 CDIPTO14735 213 aa8.81□□□□□ -1
SMG6-213ENST00000573166 GALP22466 123 aa8.81□□□□□ -1
SMG6-213ENST00000573166 GIFP27352 417 aa8.81□□□□□ -1
SMG6-213ENST00000573166 PLGLAQ15195 96 aa8.81□□□□□ -1
SMG6-213ENST00000573166 TFAP2EQ6VUC0 442 aa8.81□□□□□ -1
SMG6-213ENST00000573166 MEX3BQ6ZN04 569 aaKnown RBP8.81□□□□□ -1
SMG6-213ENST00000573166 NAA40Q86UY6 237 aa8.81□□□□□ -1
SMG6-213ENST00000573166 FAM185AQ8N0U4 392 aa8.81□□□□□ -1
SMG6-213ENST00000573166 FAM58AQ8N1B3 248 aa8.81□□□□□ -1
SMG6-213ENST00000573166 C17orf78Q8N4C9 275 aa8.81□□□□□ -1
SMG6-213ENST00000573166 LRRC75AQ8NAA5 344 aa8.81□□□□□ -1
SMG6-213ENST00000573166 GALNT11Q8NCW6 608 aa8.81□□□□□ -1
SMG6-213ENST00000573166 WNT5BQ9H1J7 359 aa8.81□□□□□ -1
SMG6-213ENST00000573166 UBQLN2Q9UHD9 624 aa8.81□□□□□ -1
SMG6-213ENST00000573166 KIR2DS1A0A191URI9 304 aa8.8□□□□□ -1
SMG6-213ENST00000573166 TEX46H3BTG2 121 aa8.8□□□□□ -1
SMG6-213ENST00000573166 TOR1AO14656 332 aa8.8□□□□□ -1
SMG6-213ENST00000573166 CREBL2O60519 120 aaPredicted RBP8.8□□□□□ -1
SMG6-213ENST00000573166 PVALBP20472 110 aaPredicted RBP8.8□□□□□ -1
SMG6-213ENST00000573166 SSTR2P30874 369 aa8.8□□□□□ -1
SMG6-213ENST00000573166 DCTDP32321 178 aa8.8□□□□□ -1
SMG6-213ENST00000573166 PLA2G5P39877 138 aa8.8□□□□□ -1
SMG6-213ENST00000573166 KIR2DS4P43632 304 aa8.8□□□□□ -1
SMG6-213ENST00000573166 TAS2R20P59543 309 aa8.8□□□□□ -1
SMG6-213ENST00000573166 ZNF92Q03936 586 aa8.8□□□□□ -1
SMG6-213ENST00000573166 KIR2DS1Q14954 304 aa8.8□□□□□ -1
SMG6-213ENST00000573166 NUDCD2Q8WVJ2 157 aa8.8□□□□□ -1
SMG6-213ENST00000573166 UQCC2Q9BRT2 126 aa8.8□□□□□ -1
SMG6-213ENST00000573166 B3GNT2Q9NY97 397 aa8.8□□□□□ -1
SMG6-213ENST00000573166 TUBD1Q9UJT1 453 aa8.8□□□□□ -1
SMG6-213ENST00000573166 ALG5Q9Y673 324 aa8.8□□□□□ -1
SMG6-213ENST00000573166 CCL8P80075 99 aa8.8□□□□□ -1
SMG6-213ENST00000573166 IGFL3Q6UXB1 125 aa8.8□□□□□ -1
SMG6-213ENST00000573166 COQ8AQ8NI60 647 aa8.8□□□□□ -1
SMG6-213ENST00000573166 ZNF629Q9UEG4 869 aaPredicted RBP8.8□□□□□ -1
SMG6-213ENST00000573166 GMDSO60547 372 aa8.8□□□□□ -1
SMG6-213ENST00000573166 PNPP00491 289 aa8.8□□□□□ -1
SMG6-213ENST00000573166 FOXF2Q12947 444 aa8.8□□□□□ -1
SMG6-213ENST00000573166 IRF3Q14653 427 aa8.8□□□□□ -1
SMG6-213ENST00000573166 PRR30Q53SZ7 412 aaPredicted RBP8.8□□□□□ -1
SMG6-213ENST00000573166 ACTBL2Q562R1 376 aa8.8□□□□□ -1
SMG6-213ENST00000573166 RAB1CQ92928 201 aa8.8□□□□□ -1
SMG6-213ENST00000573166 SPRY4Q9C004 299 aa8.8□□□□□ -1
SMG6-213ENST00000573166 PPIL3Q9H2H8 161 aaKnown RBP8.8□□□□□ -1
SMG6-213ENST00000573166 RNF115Q9Y4L5 304 aa8.8□□□□□ -1
SMG6-213ENST00000573166 M0QYG6 137 aa8.79□□□□□ -1
SMG6-213ENST00000573166 ARPC1BO15143 372 aaKnown RBP8.79□□□□□ -1
SMG6-213ENST00000573166 PRH1P02810 166 aa8.79□□□□□ -1
SMG6-213ENST00000573166 IGHV1-2P23083 117 aa8.79□□□□□ -1
SMG6-213ENST00000573166 LRRC37A5PQ49AS3 106 aa8.79□□□□□ -1
SMG6-213ENST00000573166 STEAP1BQ6NZ63 245 aa8.79□□□□□ -1
SMG6-213ENST00000573166 MOGAT3Q86VF5 341 aa8.79□□□□□ -1
SMG6-213ENST00000573166 DOLPP1Q86YN1 238 aa8.79□□□□□ -1
SMG6-213ENST00000573166 CNTNAP3BQ96NU0 1288 aa8.79□□□□□ -1
SMG6-213ENST00000573166 RNF122Q9H9V4 155 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms