RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 ERVK-16P61578 105 aa4.08□□□□□ -1.76
TOPBP1-210ENST00000572787 P2RY6Q15077 328 aa4.08□□□□□ -1.76
TOPBP1-210ENST00000572787 SURF2Q15527 256 aaPredicted RBP4.08□□□□□ -1.76
TOPBP1-210ENST00000572787 MLF2Q15773 248 aaPredicted RBP4.08□□□□□ -1.76
TOPBP1-210ENST00000572787 MICAQ29983 383 aa4.08□□□□□ -1.76
TOPBP1-210ENST00000572787 CDNFQ49AH0 187 aa4.08□□□□□ -1.76
TOPBP1-210ENST00000572787 TMEM128Q5BJH2 165 aa4.08□□□□□ -1.76
TOPBP1-210ENST00000572787 PAGE3Q5JUK9 113 aa4.08□□□□□ -1.76
TOPBP1-210ENST00000572787 CLEC12AQ5QGZ9 265 aa4.08□□□□□ -1.76
TOPBP1-210ENST00000572787 SAMD13Q5VXD3 122 aa4.08□□□□□ -1.76
TOPBP1-210ENST00000572787 FAM219BQ5XKK7 198 aa4.08□□□□□ -1.76
TOPBP1-210ENST00000572787 ZNF324BQ6AW86 544 aaPredicted RBP4.08□□□□□ -1.76
TOPBP1-210ENST00000572787 XKRXQ6PP77 449 aa4.08□□□□□ -1.76
TOPBP1-210ENST00000572787 OPN5Q6U736 354 aa4.08□□□□□ -1.76
TOPBP1-210ENST00000572787 PAMR1Q6UXH9 720 aa4.08□□□□□ -1.76
TOPBP1-210ENST00000572787 C1orf158Q8N1D5 194 aa4.08□□□□□ -1.76
TOPBP1-210ENST00000572787 PRSS33Q8NF86 280 aa4.08□□□□□ -1.76
TOPBP1-210ENST00000572787 DNAJC9Q8WXX5 260 aa4.08□□□□□ -1.76
TOPBP1-210ENST00000572787 RGP1Q92546 391 aaPredicted RBP4.08□□□□□ -1.76
TOPBP1-210ENST00000572787 MARC2Q969Z3 335 aa4.08□□□□□ -1.76
TOPBP1-210ENST00000572787 CLDN23Q96B33 292 aa4.08□□□□□ -1.76
TOPBP1-210ENST00000572787 SLC25A38Q96DW6 304 aa4.08□□□□□ -1.76
TOPBP1-210ENST00000572787 MRPL48Q96GC5 212 aaKnown RBP4.08□□□□□ -1.76
TOPBP1-210ENST00000572787 BTN2A3PQ96KV6 586 aa4.08□□□□□ -1.76
TOPBP1-210ENST00000572787 FAM218AQ96MZ4 157 aa4.08□□□□□ -1.76
TOPBP1-210ENST00000572787 PPP1R2P1Q96PQ5 205 aa4.08□□□□□ -1.76
TOPBP1-210ENST00000572787 TCEAL7Q9BRU2 100 aa4.08□□□□□ -1.76
TOPBP1-210ENST00000572787 SSBP3Q9BWW4 388 aaPredicted RBP4.08□□□□□ -1.76
TOPBP1-210ENST00000572787 MS4A8Q9BY19 250 aa4.08□□□□□ -1.76
TOPBP1-210ENST00000572787 YTHDC2Q9H6S0 1430 aaKnown RBP4.08□□□□□ -1.76
TOPBP1-210ENST00000572787 LRTM1Q9HBL6 345 aa4.08□□□□□ -1.76
TOPBP1-210ENST00000572787 WFDC1Q9HC57 220 aa4.08□□□□□ -1.76
TOPBP1-210ENST00000572787 THYN1Q9P016 225 aa4.08□□□□□ -1.76
TOPBP1-210ENST00000572787 ZNF256Q9Y2P7 627 aaPredicted RBP4.08□□□□□ -1.76
TOPBP1-210ENST00000572787 KCNE3Q9Y6H6 103 aa4.08□□□□□ -1.76
TOPBP1-210ENST00000572787 SOGA1O94964 1423 aa4.07□□□□□ -1.76
TOPBP1-210ENST00000572787 IGKV1D-8A0A087WSZ0 117 aa4.07□□□□□ -1.76
TOPBP1-210ENST00000572787 TRBV5-4A0A0C4DH59 114 aa4.07□□□□□ -1.76
TOPBP1-210ENST00000572787 EXOC1LA0A1B0GW35 172 aa4.07□□□□□ -1.76
TOPBP1-210ENST00000572787 PQLC2LA1A4F0 135 aa4.07□□□□□ -1.76
TOPBP1-210ENST00000572787 OR4C46A6NHA9 309 aa4.07□□□□□ -1.76
TOPBP1-210ENST00000572787 LINC01619G3V211 115 aa4.07□□□□□ -1.76
TOPBP1-210ENST00000572787 ETV2O00321 342 aaPredicted RBP4.07□□□□□ -1.76
TOPBP1-210ENST00000572787 SCRG1O75711 98 aa4.07□□□□□ -1.76
TOPBP1-210ENST00000572787 OR2J2O76002 312 aa4.07□□□□□ -1.76
TOPBP1-210ENST00000572787 PDYNP01213 254 aa4.07□□□□□ -1.76
TOPBP1-210ENST00000572787 IGHV3-9P01782 118 aa4.07□□□□□ -1.76
TOPBP1-210ENST00000572787 RBP1P09455 135 aa4.07□□□□□ -1.76
TOPBP1-210ENST00000572787 FBP1P09467 338 aa4.07□□□□□ -1.76
TOPBP1-210ENST00000572787 OR5G3P0C626 314 aa4.07□□□□□ -1.76
TOPBP1-210ENST00000572787 IGHV4-38-2P0DP08 117 aa4.07□□□□□ -1.76
TOPBP1-210ENST00000572787 CD1DP15813 335 aa4.07□□□□□ -1.76
TOPBP1-210ENST00000572787 PAX6P26367 422 aa4.07□□□□□ -1.76
TOPBP1-210ENST00000572787 KIR2DS2P43631 304 aa4.07□□□□□ -1.76
TOPBP1-210ENST00000572787 GZMMP51124 257 aa4.07□□□□□ -1.76
TOPBP1-210ENST00000572787 RAB13P51153 203 aa4.07□□□□□ -1.76
TOPBP1-210ENST00000572787 APOC4P55056 127 aa4.07□□□□□ -1.76
TOPBP1-210ENST00000572787 MTPNP58546 118 aa4.07□□□□□ -1.76
TOPBP1-210ENST00000572787 RHOBP62745 196 aa4.07□□□□□ -1.76
TOPBP1-210ENST00000572787 SLC35A2P78381 396 aa4.07□□□□□ -1.76
TOPBP1-210ENST00000572787 MXD1Q05195 221 aa4.07□□□□□ -1.76
TOPBP1-210ENST00000572787 ZNF630Q2M218 657 aaPredicted RBP4.07□□□□□ -1.76
TOPBP1-210ENST00000572787 ACOT6Q3I5F7 207 aaPredicted RBP4.07□□□□□ -1.76
TOPBP1-210ENST00000572787 TCTEX1D4Q5JR98 221 aa4.07□□□□□ -1.76
TOPBP1-210ENST00000572787 KLF17Q5JT82 389 aaPredicted RBP4.07□□□□□ -1.76
TOPBP1-210ENST00000572787 AVPI1Q5T686 147 aa4.07□□□□□ -1.76
TOPBP1-210ENST00000572787 SLC16A13Q7RTY0 426 aa4.07□□□□□ -1.76
TOPBP1-210ENST00000572787 ZBTB8OSQ8IWT0 167 aa4.07□□□□□ -1.76
TOPBP1-210ENST00000572787 ZNF114Q8NC26 417 aa4.07□□□□□ -1.76
TOPBP1-210ENST00000572787 OR4P4Q8NGL7 312 aa4.07□□□□□ -1.76
TOPBP1-210ENST00000572787 OR10G8Q8NGN5 311 aa4.07□□□□□ -1.76
TOPBP1-210ENST00000572787 MFSD8Q8NHS3 518 aa4.07□□□□□ -1.76
TOPBP1-210ENST00000572787 NEIL3Q8TAT5 605 aa4.07□□□□□ -1.76
TOPBP1-210ENST00000572787 SPPL2BQ8TCT7 592 aa4.07□□□□□ -1.76
TOPBP1-210ENST00000572787 ZFP90Q8TF47 636 aa4.07□□□□□ -1.76
TOPBP1-210ENST00000572787 BLNKQ8WV28 456 aa4.07□□□□□ -1.76
TOPBP1-210ENST00000572787 TMED6Q8WW62 240 aa4.07□□□□□ -1.76
TOPBP1-210ENST00000572787 TCEAL3Q969E4 200 aa4.07□□□□□ -1.76
TOPBP1-210ENST00000572787 BORCS7Q96B45 105 aa4.07□□□□□ -1.76
TOPBP1-210ENST00000572787 AURKBQ96GD4 344 aaPredicted RBP4.07□□□□□ -1.76
TOPBP1-210ENST00000572787 BIRC8Q96P09 236 aa4.07□□□□□ -1.76
TOPBP1-210ENST00000572787 TBX5Q99593 518 aa4.07□□□□□ -1.76
TOPBP1-210ENST00000572787 EBF4Q9BQW3 602 aa4.07□□□□□ -1.76
TOPBP1-210ENST00000572787 SUCNR1Q9BXA5 334 aa4.07□□□□□ -1.76
TOPBP1-210ENST00000572787 KRTAP17-1Q9BYP8 105 aa4.07□□□□□ -1.76
TOPBP1-210ENST00000572787 ABCG5Q9H222 651 aa4.07□□□□□ -1.76
TOPBP1-210ENST00000572787 RNF167Q9H6Y7 350 aa4.07□□□□□ -1.76
TOPBP1-210ENST00000572787 SPANXCQ9NY87 97 aa4.07□□□□□ -1.76
TOPBP1-210ENST00000572787 TAS2R5Q9NYW4 299 aa4.07□□□□□ -1.76
TOPBP1-210ENST00000572787 CALYQ9NYX4 217 aa4.07□□□□□ -1.76
TOPBP1-210ENST00000572787 IDI2-AS1Q9NZ38 188 aa4.07□□□□□ -1.76
TOPBP1-210ENST00000572787 PYCARDQ9ULZ3 195 aa4.07□□□□□ -1.76
TOPBP1-210ENST00000572787 ZNF257Q9Y2Q1 563 aa4.07□□□□□ -1.76
TOPBP1-210ENST00000572787 UHRF1BP1Q6BDS2 1440 aa4.06□□□□□ -1.76
TOPBP1-210ENST00000572787 PALLDQ8WX93 1383 aa4.06□□□□□ -1.76
TOPBP1-210ENST00000572787 IGLV5-37A0A075B6J1 123 aa4.06□□□□□ -1.76
TOPBP1-210ENST00000572787 A0A0B4J2A0 478 aa4.06□□□□□ -1.76
TOPBP1-210ENST00000572787 TRABD2BA6NFA1 517 aa4.06□□□□□ -1.76
TOPBP1-210ENST00000572787 ZNF726A6NNF4 738 aa4.06□□□□□ -1.76
TOPBP1-210ENST00000572787 DLEU1O43261 78 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms