RNA–Protein interactions for RNA: ENST00000571457.1

CHMP6-202, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-202ENST00000571457 CEACAM21Q3KPI0 293 aa9.03□□□□□ -0.96
CHMP6-202ENST00000571457 HAGHLQ6PII5 290 aaPredicted RBP9.03□□□□□ -0.96
CHMP6-202ENST00000571457 ZBTB49Q6ZSB9 765 aa9.03□□□□□ -0.96
CHMP6-202ENST00000571457 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.03□□□□□ -0.96
CHMP6-202ENST00000571457 SLC15A3Q8IY34 581 aa9.03□□□□□ -0.96
CHMP6-202ENST00000571457 POC1AQ8NBT0 407 aa9.03□□□□□ -0.96
CHMP6-202ENST00000571457 SLC37A3Q8NCC5 494 aa9.03□□□□□ -0.96
CHMP6-202ENST00000571457 OR5A2Q8NGI9 324 aa9.03□□□□□ -0.96
CHMP6-202ENST00000571457 OR6K6Q8NGW6 343 aa9.03□□□□□ -0.96
CHMP6-202ENST00000571457 FAM81AQ8TBF8 368 aa9.03□□□□□ -0.96
CHMP6-202ENST00000571457 STMN2Q93045 179 aa9.03□□□□□ -0.96
CHMP6-202ENST00000571457 ITFG2Q969R8 447 aa9.03□□□□□ -0.96
CHMP6-202ENST00000571457 ASCL2Q99929 193 aa9.03□□□□□ -0.96
CHMP6-202ENST00000571457 ABHD6Q9BV23 337 aa9.03□□□□□ -0.96
CHMP6-202ENST00000571457 FGF23Q9GZV9 251 aaPredicted RBP9.03□□□□□ -0.96
CHMP6-202ENST00000571457 VNN3Q9NY84 501 aa9.03□□□□□ -0.96
CHMP6-202ENST00000571457 GMPR2Q9P2T1 348 aaKnown RBP9.03□□□□□ -0.96
CHMP6-202ENST00000571457 NUDT19A8MXV4 375 aa9.02□□□□□ -0.97
CHMP6-202ENST00000571457 NDUFAB1O14561 156 aa9.02□□□□□ -0.97
CHMP6-202ENST00000571457 OR2F2O95006 317 aa9.02□□□□□ -0.97
CHMP6-202ENST00000571457 DIRAS1O95057 198 aa9.02□□□□□ -0.97
CHMP6-202ENST00000571457 H2BFMP0C1H6 154 aa9.02□□□□□ -0.97
CHMP6-202ENST00000571457 SPI1P17947 270 aa9.02□□□□□ -0.97
CHMP6-202ENST00000571457 OPRL1P41146 370 aa9.02□□□□□ -0.97
CHMP6-202ENST00000571457 MAP2K3P46734 347 aa9.02□□□□□ -0.97
CHMP6-202ENST00000571457 ACTA2P62736 377 aa9.02□□□□□ -0.97
CHMP6-202ENST00000571457 RPL23AP62750 156 aaKnown RBP9.02□□□□□ -0.97
CHMP6-202ENST00000571457 ACTG2P63267 376 aa9.02□□□□□ -0.97
CHMP6-202ENST00000571457 ACTC1P68032 377 aa9.02□□□□□ -0.97
CHMP6-202ENST00000571457 ACTA1P68133 377 aa9.02□□□□□ -0.97
CHMP6-202ENST00000571457 TSPAN31Q12999 210 aa9.02□□□□□ -0.97
CHMP6-202ENST00000571457 PLBD1Q6P4A8 553 aa9.02□□□□□ -0.97
CHMP6-202ENST00000571457 C10orf99Q6UWK7 81 aa9.02□□□□□ -0.97
CHMP6-202ENST00000571457 SHFQ7M4L6 423 aa9.02□□□□□ -0.97
CHMP6-202ENST00000571457 OR2W3Q7Z3T1 314 aa9.02□□□□□ -0.97
CHMP6-202ENST00000571457 RP9Q8TA86 221 aaKnown RBP9.02□□□□□ -0.97
CHMP6-202ENST00000571457 GNPDA2Q8TDQ7 276 aa9.02□□□□□ -0.97
CHMP6-202ENST00000571457 SLC25A33Q9BSK2 321 aa9.02□□□□□ -0.97
CHMP6-202ENST00000571457 ZFP57Q9NU63 452 aa9.02□□□□□ -0.97
CHMP6-202ENST00000571457 TBC1D23Q9NUY8 699 aa9.02□□□□□ -0.97
CHMP6-202ENST00000571457 SAMD4AQ9UPU9 718 aaKnown RBP9.02□□□□□ -0.97
CHMP6-202ENST00000571457 CDH10Q9Y6N8 788 aa9.02□□□□□ -0.97
CHMP6-202ENST00000571457 SORL1Q92673 2214 aa9.01□□□□□ -0.97
CHMP6-202ENST00000571457 EDF1O60869 148 aaKnown RBP9.01□□□□□ -0.97
CHMP6-202ENST00000571457 NXPH2O95156 264 aa9.01□□□□□ -0.97
CHMP6-202ENST00000571457 GYPBP06028 91 aa9.01□□□□□ -0.97
CHMP6-202ENST00000571457 JUNBP17275 347 aaPredicted RBP9.01□□□□□ -0.97
CHMP6-202ENST00000571457 HTR1DP28221 377 aa9.01□□□□□ -0.97
CHMP6-202ENST00000571457 CEP78Q5JTW2 689 aa9.01□□□□□ -0.97
CHMP6-202ENST00000571457 C8orf86Q6ZUL3 223 aa9.01□□□□□ -0.97
CHMP6-202ENST00000571457 KRT74Q7RTS7 529 aa9.01□□□□□ -0.97
CHMP6-202ENST00000571457 OR6N2Q8NGY6 317 aa9.01□□□□□ -0.97
CHMP6-202ENST00000571457 RCN3Q96D15 328 aa9.01□□□□□ -0.97
CHMP6-202ENST00000571457 LYZL4Q96KX0 146 aa9.01□□□□□ -0.97
CHMP6-202ENST00000571457 ZNF714Q96N38 554 aa9.01□□□□□ -0.97
CHMP6-202ENST00000571457 RBM14Q96PK6 669 aaKnown RBP9.01□□□□□ -0.97
CHMP6-202ENST00000571457 OR8B4Q96RC9 309 aa9.01□□□□□ -0.97
CHMP6-202ENST00000571457 PRR25Q96S07 402 aa9.01□□□□□ -0.97
CHMP6-202ENST00000571457 INTS14Q96SY0 518 aa9.01□□□□□ -0.97
CHMP6-202ENST00000571457 P2RX4Q99571 388 aa9.01□□□□□ -0.97
CHMP6-202ENST00000571457 HOPXQ9BPY8 73 aaPredicted RBP9.01□□□□□ -0.97
CHMP6-202ENST00000571457 KCTD14Q9BQ13 255 aaPredicted RBP9.01□□□□□ -0.97
CHMP6-202ENST00000571457 NMNAT2Q9BZQ4 307 aa9.01□□□□□ -0.97
CHMP6-202ENST00000571457 SAR1AQ9NR31 198 aa9.01□□□□□ -0.97
CHMP6-202ENST00000571457 OR14J1Q9UGF5 321 aa9.01□□□□□ -0.97
CHMP6-202ENST00000571457 POLDIP2Q9Y2S7 368 aa9.01□□□□□ -0.97
CHMP6-202ENST00000571457 CSMD3Q7Z407 3707 aa9.01□□□□□ -0.97
CHMP6-202ENST00000571457 DSCAML1Q8TD84 2053 aa9□□□□□ -0.97
CHMP6-202ENST00000571457 IGHV2-26A0A0B4J1V2 119 aa9□□□□□ -0.97
CHMP6-202ENST00000571457 K7N7A8 449 aa9□□□□□ -0.97
CHMP6-202ENST00000571457 NME4O00746 187 aa9□□□□□ -0.97
CHMP6-202ENST00000571457 NOS1APO75052 506 aaPredicted RBP9□□□□□ -0.97
CHMP6-202ENST00000571457 GMNNO75496 209 aa9□□□□□ -0.97
CHMP6-202ENST00000571457 NCK1P16333 377 aa9□□□□□ -0.97
CHMP6-202ENST00000571457 NUDT2P50583 147 aa9□□□□□ -0.97
CHMP6-202ENST00000571457 EDDM3BP56851 147 aa9□□□□□ -0.97
CHMP6-202ENST00000571457 MEF2CQ06413 473 aaPredicted RBP9□□□□□ -0.97
CHMP6-202ENST00000571457 CRMP1Q14194 572 aa9□□□□□ -0.97
CHMP6-202ENST00000571457 C9orf152Q5JTZ5 239 aa9□□□□□ -0.97
CHMP6-202ENST00000571457 LCN1P1Q5VSP4 162 aa9□□□□□ -0.97
CHMP6-202ENST00000571457 MEPCEQ7L2J0 689 aaKnown RBP9□□□□□ -0.97
CHMP6-202ENST00000571457 GDPD3Q7L5L3 318 aa9□□□□□ -0.97
CHMP6-202ENST00000571457 ZNF573Q86YE8 665 aa9□□□□□ -0.97
CHMP6-202ENST00000571457 ERI1Q8IV48 349 aaKnown RBP9□□□□□ -0.97
CHMP6-202ENST00000571457 ZNF676Q8N7Q3 588 aa9□□□□□ -0.97
CHMP6-202ENST00000571457 ASCC1Q8N9N2 400 aaKnown RBP9□□□□□ -0.97
CHMP6-202ENST00000571457 BCAS4Q8TDM0 211 aa9□□□□□ -0.97
CHMP6-202ENST00000571457 CHPT1Q8WUD6 406 aa9□□□□□ -0.97
CHMP6-202ENST00000571457 ATP6V1G3Q96LB4 118 aa9□□□□□ -0.97
CHMP6-202ENST00000571457 RCHY1Q96PM5 261 aa9□□□□□ -0.97
CHMP6-202ENST00000571457 NRIP2Q9BQI9 281 aa9□□□□□ -0.97
CHMP6-202ENST00000571457 CLEC7AQ9BXN2 247 aa9□□□□□ -0.97
CHMP6-202ENST00000571457 EGLN3Q9H6Z9 239 aa9□□□□□ -0.97
CHMP6-202ENST00000571457 NIPAL2Q9H841 368 aa9□□□□□ -0.97
CHMP6-202ENST00000571457 DCAF13Q9NV06 445 aaKnown RBP9□□□□□ -0.97
CHMP6-202ENST00000571457 IL20Q9NYY1 176 aa9□□□□□ -0.97
CHMP6-202ENST00000571457 DPM3Q9P2X0 92 aa9□□□□□ -0.97
CHMP6-202ENST00000571457 SESN1Q9Y6P5 492 aa9□□□□□ -0.97
CHMP6-202ENST00000571457 hADV38S2A0JD32 116 aa8.99□□□□□ -0.97
CHMP6-202ENST00000571457 J3QT63 122 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms