RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 MED12Q93074 2177 aa3.1□□□□□ -1.91
SMG6-208ENST00000570874 ZNF318Q5VUA4 2279 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 LAMA1P25391 3075 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 TRAV18A0A075B6X5 111 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 IGHV5-51A0A0C4DH38 117 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 LY6G6EA0A0G2JKS1 128 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 KIR2DS5A0A0G2JLQ3 304 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 KIR2DL5BA0A0G2JN68 375 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 A0A0G2JNG1 304 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 KIR2DL5BA0A0G2JPC4 375 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 CENPVL1A0A0U1RR11 272 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 KIR2DS1A0A191URI9 304 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 MEGF11A6BM72 1044 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 SMIM9A6NGZ8 99 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 CLDN24A6NM45 220 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 HSPB2A8KAH6 182 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 C5orf58C9J3I9 102 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 KIR2DS3K7RE56 304 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 SLC1A7O00341 560 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 HMGN4O00479 90 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 TM4SF5O14894 197 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 FOXS1O43638 330 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 PLPP2O43688 288 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 FGF17O60258 216 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 SLC16A7O60669 478 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 SEMA7AO75326 666 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 RDH16O75452 317 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 EIF3GO75821 320 aaKnown RBP eCLIP3.09□□□□□ -1.91
SMG6-208ENST00000570874 SNAPC5O75971 98 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 STK17BO94768 372 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 S1PR2O95136 353 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 GABARAPO95166 117 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 EPPINO95925 133 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 HPP00738 406 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 P04436 131 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 ALPLP05186 524 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 WNT2P09544 360 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 TSPAN19P0C672 248 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 ACSM4P0C7M7 580 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 ZNF806P0C7X5 589 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 OR12D1P0DN82 309 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 IFI30P13284 250 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 ZNF25P17030 456 aaPredicted RBP3.09□□□□□ -1.91
SMG6-208ENST00000570874 PGCP20142 388 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 GZMHP20718 246 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 CXCR1P25024 350 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 HTR1FP30939 366 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 POLR2IP36954 125 aaKnown RBP3.09□□□□□ -1.91
SMG6-208ENST00000570874 OR1E2P47887 323 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 HTR5AP47898 357 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 P2RY1P47900 373 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 MEOX1P50221 254 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 NCBP2P52298 156 aaKnown RBP eCLIP3.09□□□□□ -1.91
SMG6-208ENST00000570874 EFNA3P52797 238 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 LIM2P55344 173 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 CLDN15P56746 228 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 CLDN6P56747 220 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 DEFA1P59665 94 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 DEFA3P59666 94 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 RPS20P60866 119 aaKnown RBP3.09□□□□□ -1.91
SMG6-208ENST00000570874 UBE2MP61081 183 aaKnown RBP3.09□□□□□ -1.91
SMG6-208ENST00000570874 RPS15AP62244 130 aaKnown RBP3.09□□□□□ -1.91
SMG6-208ENST00000570874 EWSR1Q01844 656 aaKnown RBP eCLIP3.09□□□□□ -1.91
SMG6-208ENST00000570874 RGS1Q08116 209 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 KIR2DS5Q14953 304 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 KIR2DS1Q14954 304 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 ELOCQ15369 112 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 TRAM1Q15629 374 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 HSPB2Q16082 182 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 TIMM50Q3ZCQ8 353 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 SYT6Q5T7P8 510 aaPredicted RBP3.09□□□□□ -1.91
SMG6-208ENST00000570874 HIST2H2BCQ6DN03 193 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 HIST2H2BDQ6DRA6 164 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 RTL6Q6ICC9 239 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 TRIM40Q6P9F5 258 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 CEACAM20Q6UY09 585 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 LINC00336Q6ZUF6 198 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 CBLL1Q75N03 491 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 SLC29A4Q7RTT9 530 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 TCF24Q7RTU0 167 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 C6orf120Q7Z4R8 191 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 SERPINA11Q86U17 422 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 NOXA1Q86UR1 476 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 OOSP2Q86WS3 158 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 C17orf82Q86X59 251 aaPredicted RBP3.09□□□□□ -1.91
SMG6-208ENST00000570874 GKN2Q86XP6 184 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 KIR2DL5AQ8N109 375 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 BCL6BQ8N143 479 aaPredicted RBP3.09□□□□□ -1.91
SMG6-208ENST00000570874 CA13Q8N1Q1 262 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 PRSS35Q8N3Z0 413 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 SLC25A45Q8N413 288 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 EIF4E3Q8N5X7 224 aaKnown RBP3.09□□□□□ -1.91
SMG6-208ENST00000570874 ZNF283Q8N7M2 679 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 TMEM105Q8N8V8 129 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 AQP11Q8NBQ7 271 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 NPEPL1Q8NDH3 523 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 NFAM1Q8NET5 270 aaPredicted RBP3.09□□□□□ -1.91
SMG6-208ENST00000570874 GPR32P1Q8NGA4 272 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 OR4D11Q8NGI4 311 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 OR5L2Q8NGL0 311 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms