RNA–Protein interactions for RNA: ENST00000570475.5

USP43-202, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP43, Length 3,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-202ENST00000570475 EIF4E3Q8N5X7 224 aaKnown RBP13.46□□□□□ -0.25
USP43-202ENST00000570475 SPTSSAQ969W0 71 aa13.46□□□□□ -0.25
USP43-202ENST00000570475 ZNF837Q96EG3 531 aaPredicted RBP13.46□□□□□ -0.25
USP43-202ENST00000570475 PRRX2Q99811 253 aa13.46□□□□□ -0.25
USP43-202ENST00000570475 WNT16Q9UBV4 365 aa13.46□□□□□ -0.25
USP43-202ENST00000570475 ZNF16P17020 682 aaPredicted RBP13.46□□□□□ -0.26
USP43-202ENST00000570475 TBPP20226 339 aa13.46□□□□□ -0.26
USP43-202ENST00000570475 PTGER4P35408 488 aa13.46□□□□□ -0.26
USP43-202ENST00000570475 VAMP2P63027 116 aa13.46□□□□□ -0.26
USP43-202ENST00000570475 TLE1Q04724 770 aa13.46□□□□□ -0.26
USP43-202ENST00000570475 GNMTQ14749 295 aa13.46□□□□□ -0.26
USP43-202ENST00000570475 FBXL14Q8N1E6 418 aa13.46□□□□□ -0.26
USP43-202ENST00000570475 OR11L1Q8NGX0 322 aa13.46□□□□□ -0.26
USP43-202ENST00000570475 PIGQQ9BRB3 760 aa13.46□□□□□ -0.26
USP43-202ENST00000570475 RTBDNQ9BSG5 229 aaPredicted RBP13.46□□□□□ -0.26
USP43-202ENST00000570475 SLC5A7Q9GZV3 580 aa13.46□□□□□ -0.26
USP43-202ENST00000570475 RAB33BQ9H082 229 aa13.46□□□□□ -0.26
USP43-202ENST00000570475 SLC26A1Q9H2B4 701 aa13.46□□□□□ -0.26
USP43-202ENST00000570475 FANCFQ9NPI8 374 aa13.46□□□□□ -0.26
USP43-202ENST00000570475 A6NLC8 198 aa13.45□□□□□ -0.26
USP43-202ENST00000570475 ONECUT2O95948 504 aa13.45□□□□□ -0.26
USP43-202ENST00000570475 IL2RAP01589 272 aa13.45□□□□□ -0.26
USP43-202ENST00000570475 AFF3P51826 1226 aaKnown RBP13.45□□□□□ -0.26
USP43-202ENST00000570475 PLPPR5Q32ZL2 321 aa13.45□□□□□ -0.26
USP43-202ENST00000570475 METTL9Q9H1A3 318 aa13.45□□□□□ -0.26
USP43-202ENST00000570475 B3GAT1Q9P2W7 334 aa13.45□□□□□ -0.26
USP43-202ENST00000570475 MCTS1Q9ULC4 181 aaKnown RBP13.45□□□□□ -0.26
USP43-202ENST00000570475 PGA4P0DJD7 388 aa13.45□□□□□ -0.26
USP43-202ENST00000570475 PGA3P0DJD8 388 aa13.45□□□□□ -0.26
USP43-202ENST00000570475 NXPH1P58417 271 aa13.45□□□□□ -0.26
USP43-202ENST00000570475 PIGYQ3MUY2 71 aa13.45□□□□□ -0.26
USP43-202ENST00000570475 PLCXD3Q63HM9 321 aa13.45□□□□□ -0.26
USP43-202ENST00000570475 ZNF774Q6NX45 483 aa13.45□□□□□ -0.26
USP43-202ENST00000570475 RASL10BQ96S79 203 aa13.45□□□□□ -0.26
USP43-202ENST00000570475 SMCO4Q9NRQ5 59 aa13.45□□□□□ -0.26
USP43-202ENST00000570475 GPR37O15354 613 aa13.44□□□□□ -0.26
USP43-202ENST00000570475 KLK3P07288 261 aaPredicted RBP13.44□□□□□ -0.26
USP43-202ENST00000570475 NQO2P16083 231 aa13.44□□□□□ -0.26
USP43-202ENST00000570475 RPS10P46783 165 aaKnown RBP13.44□□□□□ -0.26
USP43-202ENST00000570475 SUPT4H1P63272 117 aaKnown RBP13.44□□□□□ -0.26
USP43-202ENST00000570475 ECH1Q13011 328 aa13.44□□□□□ -0.26
USP43-202ENST00000570475 FAHD2BQ6P2I3 314 aaPredicted RBP13.44□□□□□ -0.26
USP43-202ENST00000570475 ZNF565Q8N9K5 539 aa13.44□□□□□ -0.26
USP43-202ENST00000570475 SMRP1Q8NCR6 262 aa13.44□□□□□ -0.26
USP43-202ENST00000570475 PTX4Q96A99 478 aa13.44□□□□□ -0.26
USP43-202ENST00000570475 FAHD2AQ96GK7 314 aa13.44□□□□□ -0.26
USP43-202ENST00000570475 CNTNAP3Q9BZ76 1288 aa13.44□□□□□ -0.26
USP43-202ENST00000570475 FAM212BQ9NTI7 297 aaPredicted RBP13.44□□□□□ -0.26
USP43-202ENST00000570475 SLC2A8Q9NY64 477 aa13.44□□□□□ -0.26
USP43-202ENST00000570475 C19orf25Q9UFG5 118 aaPredicted RBP13.44□□□□□ -0.26
USP43-202ENST00000570475 ICE1Q9Y2F5 2266 aa13.44□□□□□ -0.26
USP43-202ENST00000570475 TRAF3IP2O43734 574 aaPredicted RBP13.44□□□□□ -0.26
USP43-202ENST00000570475 OTX2P32243 289 aa13.44□□□□□ -0.26
USP43-202ENST00000570475 GRB2P62993 217 aaKnown RBP13.44□□□□□ -0.26
USP43-202ENST00000570475 HAGHQ16775 308 aa13.44□□□□□ -0.26
USP43-202ENST00000570475 ERGIC1Q969X5 290 aa13.44□□□□□ -0.26
USP43-202ENST00000570475 PAPOLGQ9BWT3 736 aaKnown RBP13.44□□□□□ -0.26
USP43-202ENST00000570475 MUC22E2RYF6 1773 aaPredicted RBP13.44□□□□□ -0.26
USP43-202ENST00000570475 CACNA1GO43497 2377 aa13.44□□□□□ -0.26
USP43-202ENST00000570475 H3BP45 60 aa13.44□□□□□ -0.26
USP43-202ENST00000570475 CST7O76096 145 aa13.44□□□□□ -0.26
USP43-202ENST00000570475 SLC35A1P78382 337 aa13.44□□□□□ -0.26
USP43-202ENST00000570475 CCL7P80098 99 aa13.44□□□□□ -0.26
USP43-202ENST00000570475 NHLH2Q02577 135 aa13.44□□□□□ -0.26
USP43-202ENST00000570475 PDZD11Q5EBL8 140 aa13.44□□□□□ -0.26
USP43-202ENST00000570475 C5orf24Q7Z6I8 188 aa13.44□□□□□ -0.26
USP43-202ENST00000570475 ZFP62Q8NB50 900 aaPredicted RBP13.44□□□□□ -0.26
USP43-202ENST00000570475 UBALD1Q8TB05 177 aa13.44□□□□□ -0.26
USP43-202ENST00000570475 SPACA9Q96E40 222 aaPredicted RBP13.44□□□□□ -0.26
USP43-202ENST00000570475 ZNF285Q96NJ3 590 aa13.44□□□□□ -0.26
USP43-202ENST00000570475 R4GN57 208 aa13.44□□□□□ -0.26
USP43-202ENST00000570475 A0A1W2PPH5 198 aa13.43□□□□□ -0.26
USP43-202ENST00000570475 LPAL2Q16609 132 aa13.43□□□□□ -0.26
USP43-202ENST00000570475 ZNF529Q6P280 563 aa13.43□□□□□ -0.26
USP43-202ENST00000570475 DHRS11Q6UWP2 260 aa13.43□□□□□ -0.26
USP43-202ENST00000570475 GPR137CQ8N3F9 429 aa13.43□□□□□ -0.26
USP43-202ENST00000570475 SLC30A7Q8NEW0 376 aa13.43□□□□□ -0.26
USP43-202ENST00000570475 SFT2D1Q8WV19 159 aa13.43□□□□□ -0.26
USP43-202ENST00000570475 IP6K3Q96PC2 410 aa13.43□□□□□ -0.26
USP43-202ENST00000570475 USB1Q9BQ65 265 aaKnown RBP13.43□□□□□ -0.26
USP43-202ENST00000570475 MMP24Q9Y5R2 645 aa13.43□□□□□ -0.26
USP43-202ENST00000570475 A0A1W2PR77 199 aa13.43□□□□□ -0.26
USP43-202ENST00000570475 UMAD1C9J7I0 102 aa13.43□□□□□ -0.26
USP43-202ENST00000570475 GEMIN2O14893 280 aaKnown RBP13.43□□□□□ -0.26
USP43-202ENST00000570475 DHHO43323 396 aa13.43□□□□□ -0.26
USP43-202ENST00000570475 SRSF10O75494 262 aaKnown RBP13.43□□□□□ -0.26
USP43-202ENST00000570475 CCL2P13500 99 aa13.43□□□□□ -0.26
USP43-202ENST00000570475 RPS18P62269 152 aaKnown RBP13.43□□□□□ -0.26
USP43-202ENST00000570475 SNAI3Q3KNW1 292 aa13.43□□□□□ -0.26
USP43-202ENST00000570475 RBMS3Q6XE24 437 aaKnown RBP13.43□□□□□ -0.26
USP43-202ENST00000570475 BSCL2Q96G97 398 aaPredicted RBP13.43□□□□□ -0.26
USP43-202ENST00000570475 CRLF2Q9HC73 371 aa13.43□□□□□ -0.26
USP43-202ENST00000570475 RFNGQ9Y644 331 aa13.43□□□□□ -0.26
USP43-202ENST00000570475 CDRT15L2A8MXV6 281 aa13.43□□□□□ -0.26
USP43-202ENST00000570475 HFEQ30201 348 aa13.43□□□□□ -0.26
USP43-202ENST00000570475 POC1BQ8TC44 478 aa13.43□□□□□ -0.26
USP43-202ENST00000570475 CYTL1Q9NRR1 136 aa13.43□□□□□ -0.26
USP43-202ENST00000570475 ST3GAL6Q9Y274 331 aa13.43□□□□□ -0.26
USP43-202ENST00000570475 LOC390937A0A1W2PQ73 354 aa13.42□□□□□ -0.26
USP43-202ENST00000570475 JTBO76095 146 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms