RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 SLC6A6P31641 620 aa8.21□□□□□ -1.1
CTDNEP1-202ENST00000570380 SLC15A1P46059 708 aa8.21□□□□□ -1.1
CTDNEP1-202ENST00000570380 GRB2P62993 217 aaKnown RBP8.21□□□□□ -1.1
CTDNEP1-202ENST00000570380 GNG3P63215 75 aa8.21□□□□□ -1.1
CTDNEP1-202ENST00000570380 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.21□□□□□ -1.1
CTDNEP1-202ENST00000570380 IL18R1Q13478 541 aa8.21□□□□□ -1.1
CTDNEP1-202ENST00000570380 EIF2B1Q14232 305 aaKnown RBP8.21□□□□□ -1.1
CTDNEP1-202ENST00000570380 IFI44LQ53G44 452 aa8.21□□□□□ -1.1
CTDNEP1-202ENST00000570380 SLC35F1Q5T1Q4 408 aa8.21□□□□□ -1.1
CTDNEP1-202ENST00000570380 TCF23Q7RTU1 214 aa8.21□□□□□ -1.1
CTDNEP1-202ENST00000570380 ZDHHC23Q8IYP9 409 aa8.21□□□□□ -1.1
CTDNEP1-202ENST00000570380 PROKR2Q8NFJ6 384 aa8.21□□□□□ -1.1
CTDNEP1-202ENST00000570380 OR4P4Q8NGL7 312 aa8.21□□□□□ -1.1
CTDNEP1-202ENST00000570380 CHPT1Q8WUD6 406 aa8.21□□□□□ -1.1
CTDNEP1-202ENST00000570380 ZNF488Q96MN9 340 aa8.21□□□□□ -1.1
CTDNEP1-202ENST00000570380 OR8B4Q96RC9 309 aa8.21□□□□□ -1.1
CTDNEP1-202ENST00000570380 CDRT15Q96T59 188 aa8.21□□□□□ -1.1
CTDNEP1-202ENST00000570380 TM2D3Q9BRN9 247 aa8.21□□□□□ -1.1
CTDNEP1-202ENST00000570380 IFT27Q9BW83 186 aa8.21□□□□□ -1.1
CTDNEP1-202ENST00000570380 OR10A2Q9H208 303 aa8.21□□□□□ -1.1
CTDNEP1-202ENST00000570380 BRD7Q9NPI1 651 aa8.21□□□□□ -1.1
CTDNEP1-202ENST00000570380 NKIRAS1Q9NYS0 192 aa8.21□□□□□ -1.1
CTDNEP1-202ENST00000570380 DNAJC27Q9NZQ0 273 aa8.21□□□□□ -1.1
CTDNEP1-202ENST00000570380 LINC00527Q9UJ94 153 aa8.21□□□□□ -1.1
CTDNEP1-202ENST00000570380 HHLA2Q9UM44 414 aa8.21□□□□□ -1.1
CTDNEP1-202ENST00000570380 A0A1W2PRQ8 180 aa8.2□□□□□ -1.1
CTDNEP1-202ENST00000570380 DHRS12A0PJE2 317 aa8.2□□□□□ -1.1
CTDNEP1-202ENST00000570380 ZNF682O95780 498 aa8.2□□□□□ -1.1
CTDNEP1-202ENST00000570380 H1F0P07305 194 aaKnown RBP8.2□□□□□ -1.1
CTDNEP1-202ENST00000570380 HSD11B1P28845 292 aa8.2□□□□□ -1.1
CTDNEP1-202ENST00000570380 BRS3P32247 399 aa8.2□□□□□ -1.1
CTDNEP1-202ENST00000570380 VEGFCP49767 419 aa8.2□□□□□ -1.1
CTDNEP1-202ENST00000570380 DGCR6Q14129 220 aa8.2□□□□□ -1.1
CTDNEP1-202ENST00000570380 SMIM21Q3B7S5 101 aa8.2□□□□□ -1.1
CTDNEP1-202ENST00000570380 ZNF260Q3ZCT1 412 aa8.2□□□□□ -1.1
CTDNEP1-202ENST00000570380 FGD3Q5JSP0 725 aa8.2□□□□□ -1.1
CTDNEP1-202ENST00000570380 CEP78Q5JTW2 689 aa8.2□□□□□ -1.1
CTDNEP1-202ENST00000570380 TEX30Q5JUR7 227 aa8.2□□□□□ -1.1
CTDNEP1-202ENST00000570380 HAGHLQ6PII5 290 aaPredicted RBP8.2□□□□□ -1.1
CTDNEP1-202ENST00000570380 ZNF511Q8NB15 262 aa8.2□□□□□ -1.1
CTDNEP1-202ENST00000570380 POC1AQ8NBT0 407 aa8.2□□□□□ -1.1
CTDNEP1-202ENST00000570380 OR2T12Q8NG77 320 aa8.2□□□□□ -1.1
CTDNEP1-202ENST00000570380 ZNF714Q96N38 554 aa8.2□□□□□ -1.1
CTDNEP1-202ENST00000570380 HIST1H2AAQ96QV6 131 aa8.2□□□□□ -1.1
CTDNEP1-202ENST00000570380 CLEC7AQ9BXN2 247 aa8.2□□□□□ -1.1
CTDNEP1-202ENST00000570380 RGCCQ9H4X1 137 aa8.2□□□□□ -1.1
CTDNEP1-202ENST00000570380 DCLRE1BQ9H816 532 aa8.2□□□□□ -1.1
CTDNEP1-202ENST00000570380 GMPR2Q9P2T1 348 aaKnown RBP8.2□□□□□ -1.1
CTDNEP1-202ENST00000570380 SESN1Q9Y6P5 492 aa8.2□□□□□ -1.1
CTDNEP1-202ENST00000570380 ENPP4Q9Y6X5 453 aa8.2□□□□□ -1.1
CTDNEP1-202ENST00000570380 K7N7A8 449 aa8.19□□□□□ -1.1
CTDNEP1-202ENST00000570380 IDH3BO43837 385 aa8.19□□□□□ -1.1
CTDNEP1-202ENST00000570380 HCKP08631 526 aa8.19□□□□□ -1.1
CTDNEP1-202ENST00000570380 KIR2DS1Q14954 304 aa8.19□□□□□ -1.1
CTDNEP1-202ENST00000570380 SNAPC1Q16533 368 aa8.19□□□□□ -1.1
CTDNEP1-202ENST00000570380 CEACAM21Q3KPI0 293 aa8.19□□□□□ -1.1
CTDNEP1-202ENST00000570380 LCNL1Q6ZST4 164 aa8.19□□□□□ -1.1
CTDNEP1-202ENST00000570380 FKBP9P1Q75LS8 142 aa8.19□□□□□ -1.1
CTDNEP1-202ENST00000570380 CBLL1Q75N03 491 aa8.19□□□□□ -1.1
CTDNEP1-202ENST00000570380 CYP4Z1Q86W10 505 aa8.19□□□□□ -1.1
CTDNEP1-202ENST00000570380 ZNF676Q8N7Q3 588 aa8.19□□□□□ -1.1
CTDNEP1-202ENST00000570380 OR2T4Q8NH00 348 aa8.19□□□□□ -1.1
CTDNEP1-202ENST00000570380 OR4Q3Q8NH05 313 aa8.19□□□□□ -1.1
CTDNEP1-202ENST00000570380 OR8U1Q8NH10 309 aa8.19□□□□□ -1.1
CTDNEP1-202ENST00000570380 PGAM5Q96HS1 289 aa8.19□□□□□ -1.1
CTDNEP1-202ENST00000570380 HSH2DQ96JZ2 352 aa8.19□□□□□ -1.1
CTDNEP1-202ENST00000570380 FUZQ9BT04 418 aa8.19□□□□□ -1.1
CTDNEP1-202ENST00000570380 TMEM133Q9H2Q1 129 aa8.19□□□□□ -1.1
CTDNEP1-202ENST00000570380 PAPOLBQ9NRJ5 636 aaKnown RBP8.19□□□□□ -1.1
CTDNEP1-202ENST00000570380 DPM3Q9P2X0 92 aa8.19□□□□□ -1.1
CTDNEP1-202ENST00000570380 OR14J1Q9UGF5 321 aa8.19□□□□□ -1.1
CTDNEP1-202ENST00000570380 CD300AQ9UGN4 299 aa8.19□□□□□ -1.1
CTDNEP1-202ENST00000570380 M0QZK8 103 aa8.18□□□□□ -1.1
CTDNEP1-202ENST00000570380 DNAJC8O75937 253 aaPredicted RBP8.18□□□□□ -1.1
CTDNEP1-202ENST00000570380 SASH3O75995 380 aa8.18□□□□□ -1.1
CTDNEP1-202ENST00000570380 APOC1P02654 83 aa8.18□□□□□ -1.1
CTDNEP1-202ENST00000570380 RPLP1P05386 114 aaKnown RBP8.18□□□□□ -1.1
CTDNEP1-202ENST00000570380 FMO3P31513 532 aa8.18□□□□□ -1.1
CTDNEP1-202ENST00000570380 EDDM3BP56851 147 aa8.18□□□□□ -1.1
CTDNEP1-202ENST00000570380 MAGOHP61326 146 aaKnown RBP8.18□□□□□ -1.1
CTDNEP1-202ENST00000570380 KRT72Q14CN4 511 aa8.18□□□□□ -1.1
CTDNEP1-202ENST00000570380 BAIAP2L2Q6UXY1 529 aa8.18□□□□□ -1.1
CTDNEP1-202ENST00000570380 LHFPL2Q6ZUX7 228 aa8.18□□□□□ -1.1
CTDNEP1-202ENST00000570380 KRT74Q7RTS7 529 aa8.18□□□□□ -1.1
CTDNEP1-202ENST00000570380 BATF2Q8N1L9 274 aa8.18□□□□□ -1.1
CTDNEP1-202ENST00000570380 COMMD1Q8N668 190 aa8.18□□□□□ -1.1
CTDNEP1-202ENST00000570380 RNF133Q8WVZ7 376 aa8.18□□□□□ -1.1
CTDNEP1-202ENST00000570380 AMELYQ99218 206 aa8.18□□□□□ -1.1
CTDNEP1-202ENST00000570380 KRCC1Q9NPI7 259 aaPredicted RBP8.18□□□□□ -1.1
CTDNEP1-202ENST00000570380 MOB4Q9Y3A3 225 aa8.18□□□□□ -1.1
CTDNEP1-202ENST00000570380 HSPE1-MOB4S4R3N1 261 aa8.18□□□□□ -1.1
CTDNEP1-202ENST00000570380 SERPINE3A8MV23 424 aa8.17□□□□□ -1.1
CTDNEP1-202ENST00000570380 NOS1APO75052 506 aaPredicted RBP8.17□□□□□ -1.1
CTDNEP1-202ENST00000570380 ZNF737O75373 536 aa8.17□□□□□ -1.1
CTDNEP1-202ENST00000570380 MMP23AO75900 390 aa8.17□□□□□ -1.1
CTDNEP1-202ENST00000570380 DIRAS1O95057 198 aa8.17□□□□□ -1.1
CTDNEP1-202ENST00000570380 NXPH2O95156 264 aa8.17□□□□□ -1.1
CTDNEP1-202ENST00000570380 NPPAP01160 153 aa8.17□□□□□ -1.1
CTDNEP1-202ENST00000570380 GYPBP06028 91 aa8.17□□□□□ -1.1
CTDNEP1-202ENST00000570380 SLC35B1P78383 322 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms