RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 ACSM1Q08AH1 577 aa14.01□□□□□ -0.17
MAP1LC3B-208ENST00000570189 OCLNQ16625 522 aa14.01□□□□□ -0.17
MAP1LC3B-208ENST00000570189 SLC25A30Q5SVS4 291 aa14.01□□□□□ -0.17
MAP1LC3B-208ENST00000570189 SSX6Q7RTT6 188 aa14.01□□□□□ -0.17
MAP1LC3B-208ENST00000570189 CATSPERDQ86XM0 798 aa14.01□□□□□ -0.17
MAP1LC3B-208ENST00000570189 OR51G2Q8NGK0 314 aa14.01□□□□□ -0.17
MAP1LC3B-208ENST00000570189 TRUB1Q8WWH5 349 aaKnown RBP14.01□□□□□ -0.17
MAP1LC3B-208ENST00000570189 RFKQ969G6 155 aa14.01□□□□□ -0.17
MAP1LC3B-208ENST00000570189 NRIP2Q9BQI9 281 aa14.01□□□□□ -0.17
MAP1LC3B-208ENST00000570189 TTTY10Q9BZA0 68 aa14.01□□□□□ -0.17
MAP1LC3B-208ENST00000570189 PKIBQ9C010 78 aa14.01□□□□□ -0.17
MAP1LC3B-208ENST00000570189 DPAGT1Q9H3H5 408 aa14.01□□□□□ -0.17
MAP1LC3B-208ENST00000570189 SLC22A13Q9Y226 551 aa14.01□□□□□ -0.17
MAP1LC3B-208ENST00000570189 CIB2O75838 187 aa14□□□□□ -0.17
MAP1LC3B-208ENST00000570189 CRYBA1P05813 215 aa14□□□□□ -0.17
MAP1LC3B-208ENST00000570189 EEF1B2P24534 225 aaKnown RBP14□□□□□ -0.17
MAP1LC3B-208ENST00000570189 HAAOP46952 286 aa14□□□□□ -0.17
MAP1LC3B-208ENST00000570189 GMFBP60983 142 aa14□□□□□ -0.17
MAP1LC3B-208ENST00000570189 ERVK11-1P61568 191 aa14□□□□□ -0.17
MAP1LC3B-208ENST00000570189 GDPGP1Q6ZNW5 385 aa14□□□□□ -0.17
MAP1LC3B-208ENST00000570189 ZNF561Q8N587 486 aa14□□□□□ -0.17
MAP1LC3B-208ENST00000570189 ZNRF1Q8ND25 227 aa14□□□□□ -0.17
MAP1LC3B-208ENST00000570189 OR5D13Q8NGL4 314 aa14□□□□□ -0.17
MAP1LC3B-208ENST00000570189 WFDC12Q8WWY7 111 aa14□□□□□ -0.17
MAP1LC3B-208ENST00000570189 H1FXQ92522 213 aaKnown RBP14□□□□□ -0.17
MAP1LC3B-208ENST00000570189 C10orf35Q96D05 121 aa14□□□□□ -0.17
MAP1LC3B-208ENST00000570189 SIRT7Q9NRC8 400 aa14□□□□□ -0.17
MAP1LC3B-208ENST00000570189 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14□□□□□ -0.17
MAP1LC3B-208ENST00000570189 A0A1W2PQL4 384 aaPredicted RBP13.99□□□□□ -0.17
MAP1LC3B-208ENST00000570189 METTL15A6NJ78 407 aa13.99□□□□□ -0.17
MAP1LC3B-208ENST00000570189 NPFFO15130 113 aa13.99□□□□□ -0.17
MAP1LC3B-208ENST00000570189 MAGEB4O15481 346 aaPredicted RBP13.99□□□□□ -0.17
MAP1LC3B-208ENST00000570189 IGHV4-59P01825 116 aa13.99□□□□□ -0.17
MAP1LC3B-208ENST00000570189 ALPLP05186 524 aa13.99□□□□□ -0.17
MAP1LC3B-208ENST00000570189 NDUFB7P17568 137 aa13.99□□□□□ -0.17
MAP1LC3B-208ENST00000570189 POLR2IP36954 125 aaKnown RBP13.99□□□□□ -0.17
MAP1LC3B-208ENST00000570189 CDC42P60953 191 aa13.99□□□□□ -0.17
MAP1LC3B-208ENST00000570189 IL24Q13007 206 aa13.99□□□□□ -0.17
MAP1LC3B-208ENST00000570189 BLMHQ13867 455 aa13.99□□□□□ -0.17
MAP1LC3B-208ENST00000570189 OLFML2AQ68BL7 652 aa13.99□□□□□ -0.17
MAP1LC3B-208ENST00000570189 YIPF7Q8N8F6 280 aa13.99□□□□□ -0.17
MAP1LC3B-208ENST00000570189 RORBQ92753 470 aa13.99□□□□□ -0.17
MAP1LC3B-208ENST00000570189 EME1Q96AY2 570 aa13.99□□□□□ -0.17
MAP1LC3B-208ENST00000570189 HRASLS5Q96KN8 279 aa13.99□□□□□ -0.17
MAP1LC3B-208ENST00000570189 FAM234AQ9H0X4 552 aa13.99□□□□□ -0.17
MAP1LC3B-208ENST00000570189 SEBOXQ9HB31 216 aaPredicted RBP13.99□□□□□ -0.17
MAP1LC3B-208ENST00000570189 USE1Q9NZ43 259 aa13.99□□□□□ -0.17
MAP1LC3B-208ENST00000570189 FAM96BQ9Y3D0 163 aa13.99□□□□□ -0.17
MAP1LC3B-208ENST00000570189 CLPSL1A2RUU4 121 aa13.98□□□□□ -0.17
MAP1LC3B-208ENST00000570189 ANKRD61A6NGH8 418 aa13.98□□□□□ -0.17
MAP1LC3B-208ENST00000570189 SYNGR1O43759 233 aa13.98□□□□□ -0.17
MAP1LC3B-208ENST00000570189 GPR137BO60478 399 aa13.98□□□□□ -0.17
MAP1LC3B-208ENST00000570189 TFF1P04155 84 aa13.98□□□□□ -0.17
MAP1LC3B-208ENST00000570189 GABRA2P47869 451 aa13.98□□□□□ -0.17
MAP1LC3B-208ENST00000570189 PLEKHG7Q6ZR37 379 aa13.98□□□□□ -0.17
MAP1LC3B-208ENST00000570189 CALHM1Q8IU99 346 aa13.98□□□□□ -0.17
MAP1LC3B-208ENST00000570189 CD177Q8N6Q3 437 aa13.98□□□□□ -0.17
MAP1LC3B-208ENST00000570189 CHST5Q9GZS9 411 aa13.98□□□□□ -0.17
MAP1LC3B-208ENST00000570189 SEMA6AQ9H2E6 1030 aa13.98□□□□□ -0.17
MAP1LC3B-208ENST00000570189 GPR173Q9NS66 373 aa13.98□□□□□ -0.17
MAP1LC3B-208ENST00000570189 GTF2A1LQ9UNN4 478 aa13.98□□□□□ -0.17
MAP1LC3B-208ENST00000570189 MEGF8Q7Z7M0 2845 aa13.98□□□□□ -0.17
MAP1LC3B-208ENST00000570189 A0A1W2PQ09 198 aa13.97□□□□□ -0.17
MAP1LC3B-208ENST00000570189 RFPL4AA6NLU0 287 aa13.97□□□□□ -0.17
MAP1LC3B-208ENST00000570189 RFPL4AL1F8VTS6 287 aa13.97□□□□□ -0.17
MAP1LC3B-208ENST00000570189 J3QRE1 110 aa13.97□□□□□ -0.17
MAP1LC3B-208ENST00000570189 SLC1A7O00341 560 aa13.97□□□□□ -0.17
MAP1LC3B-208ENST00000570189 KNG1P01042 644 aa13.97□□□□□ -0.17
MAP1LC3B-208ENST00000570189 OMGP23515 440 aa13.97□□□□□ -0.17
MAP1LC3B-208ENST00000570189 TAF9Q16594 264 aa13.97□□□□□ -0.17
MAP1LC3B-208ENST00000570189 MIDNQ504T8 468 aa13.97□□□□□ -0.17
MAP1LC3B-208ENST00000570189 DMRTC1Q5HYR2 192 aa13.97□□□□□ -0.17
MAP1LC3B-208ENST00000570189 HCP5Q6MZN7 132 aa13.97□□□□□ -0.17
MAP1LC3B-208ENST00000570189 ZFP1Q6P2D0 407 aa13.97□□□□□ -0.17
MAP1LC3B-208ENST00000570189 KCTD20Q7Z5Y7 419 aa13.97□□□□□ -0.17
MAP1LC3B-208ENST00000570189 ZSCAN4Q8NAM6 433 aaPredicted RBP13.97□□□□□ -0.17
MAP1LC3B-208ENST00000570189 BEND2Q8NDZ0 799 aa13.97□□□□□ -0.17
MAP1LC3B-208ENST00000570189 TMEM185AQ8NFB2 350 aa13.97□□□□□ -0.17
MAP1LC3B-208ENST00000570189 OR5R1Q8NH85 324 aa13.97□□□□□ -0.17
MAP1LC3B-208ENST00000570189 TAF15Q92804 592 aaKnown RBP eCLIP13.97□□□□□ -0.17
MAP1LC3B-208ENST00000570189 RNF166Q96A37 237 aaPredicted RBP13.97□□□□□ -0.17
MAP1LC3B-208ENST00000570189 CITED1Q99966 193 aa13.97□□□□□ -0.17
MAP1LC3B-208ENST00000570189 RIBC2Q9H4K1 309 aa13.97□□□□□ -0.17
MAP1LC3B-208ENST00000570189 C16orf95Q9H693 158 aa13.97□□□□□ -0.17
MAP1LC3B-208ENST00000570189 VPREB3Q9UKI3 123 aa13.97□□□□□ -0.17
MAP1LC3B-208ENST00000570189 CMYA5Q8N3K9 4069 aa13.96□□□□□ -0.17
MAP1LC3B-208ENST00000570189 A0A1W2PPH5 198 aa13.96□□□□□ -0.17
MAP1LC3B-208ENST00000570189 SYT7O43581 403 aa13.96□□□□□ -0.17
MAP1LC3B-208ENST00000570189 GATBO75879 557 aaKnown RBP13.96□□□□□ -0.17
MAP1LC3B-208ENST00000570189 CLPXO76031 633 aa13.96□□□□□ -0.17
MAP1LC3B-208ENST00000570189 RPP14O95059 124 aaKnown RBP13.96□□□□□ -0.17
MAP1LC3B-208ENST00000570189 UBCP0CG48 685 aaKnown RBP13.96□□□□□ -0.17
MAP1LC3B-208ENST00000570189 PRDX2P32119 198 aa13.96□□□□□ -0.17
MAP1LC3B-208ENST00000570189 SAA4P35542 130 aa13.96□□□□□ -0.17
MAP1LC3B-208ENST00000570189 SNRPGP62308 76 aaKnown RBP13.96□□□□□ -0.17
MAP1LC3B-208ENST00000570189 ACTC1P68032 377 aa13.96□□□□□ -0.17
MAP1LC3B-208ENST00000570189 ACTA1P68133 377 aa13.96□□□□□ -0.17
MAP1LC3B-208ENST00000570189 AANATQ16613 207 aa13.96□□□□□ -0.17
MAP1LC3B-208ENST00000570189 MEDAGQ5VYS4 303 aa13.96□□□□□ -0.17
MAP1LC3B-208ENST00000570189 FDX2Q6P4F2 183 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms