RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 ASRGL1Q7L266 308 aa3.94□□□□□ -1.78
CLK3-219ENST00000567805 VMO1Q7Z5L0 202 aa3.94□□□□□ -1.78
CLK3-219ENST00000567805 ZNF573Q86YE8 665 aa3.94□□□□□ -1.78
CLK3-219ENST00000567805 FGFRL1Q8N441 504 aa3.94□□□□□ -1.78
CLK3-219ENST00000567805 YIPF7Q8N8F6 280 aa3.94□□□□□ -1.78
CLK3-219ENST00000567805 POC1AQ8NBT0 407 aa3.94□□□□□ -1.78
CLK3-219ENST00000567805 CCDC54Q8NEL0 328 aa3.94□□□□□ -1.78
CLK3-219ENST00000567805 OR5T2Q8NGG2 359 aa3.94□□□□□ -1.78
CLK3-219ENST00000567805 OR51G2Q8NGK0 314 aa3.94□□□□□ -1.78
CLK3-219ENST00000567805 OR8J1Q8NGP2 316 aa3.94□□□□□ -1.78
CLK3-219ENST00000567805 OR14K1Q8NGZ2 314 aa3.94□□□□□ -1.78
CLK3-219ENST00000567805 TBC1D15Q8TC07 691 aa3.94□□□□□ -1.78
CLK3-219ENST00000567805 SSMEM1Q8WWF3 244 aa3.94□□□□□ -1.78
CLK3-219ENST00000567805 TRUB1Q8WWH5 349 aaKnown RBP3.94□□□□□ -1.78
CLK3-219ENST00000567805 AQP3Q92482 292 aa3.94□□□□□ -1.78
CLK3-219ENST00000567805 H1FXQ92522 213 aaKnown RBP3.94□□□□□ -1.78
CLK3-219ENST00000567805 RFKQ969G6 155 aa3.94□□□□□ -1.78
CLK3-219ENST00000567805 PPP1R14AQ96A00 147 aa3.94□□□□□ -1.78
CLK3-219ENST00000567805 TMIGD2Q96BF3 282 aa3.94□□□□□ -1.78
CLK3-219ENST00000567805 GAFA1Q96PS6 74 aa3.94□□□□□ -1.78
CLK3-219ENST00000567805 APOL4Q9BPW4 351 aa3.94□□□□□ -1.78
CLK3-219ENST00000567805 ZNF747Q9BV97 191 aa3.94□□□□□ -1.78
CLK3-219ENST00000567805 SEMA6AQ9H2E6 1030 aa3.94□□□□□ -1.78
CLK3-219ENST00000567805 RIBC2Q9H4K1 309 aa3.94□□□□□ -1.78
CLK3-219ENST00000567805 UNKLQ9H9P5 680 aaKnown RBP3.94□□□□□ -1.78
CLK3-219ENST00000567805 SNTG1Q9NSN8 517 aa3.94□□□□□ -1.78
CLK3-219ENST00000567805 SLC25A10Q9UBX3 287 aaPredicted RBP3.94□□□□□ -1.78
CLK3-219ENST00000567805 MRM2Q9UI43 246 aaKnown RBP3.94□□□□□ -1.78
CLK3-219ENST00000567805 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.94□□□□□ -1.78
CLK3-219ENST00000567805 POLDIP2Q9Y2S7 368 aa3.94□□□□□ -1.78
CLK3-219ENST00000567805 CAB39Q9Y376 341 aaPredicted RBP3.94□□□□□ -1.78
CLK3-219ENST00000567805 PCDHGB1Q9Y5G3 927 aa3.94□□□□□ -1.78
CLK3-219ENST00000567805 ORC6Q9Y5N6 252 aa3.94□□□□□ -1.78
CLK3-219ENST00000567805 V9GYS6 101 aa3.94□□□□□ -1.78
CLK3-219ENST00000567805 IGKV1D-17A0A075B6S4 117 aa3.93□□□□□ -1.78
CLK3-219ENST00000567805 TRBV23-1A0A0A0MS06 115 aa3.93□□□□□ -1.78
CLK3-219ENST00000567805 KRTAP4-8A0A0G2JLE6 195 aa3.93□□□□□ -1.78
CLK3-219ENST00000567805 A0A0U1RQK1 487 aa3.93□□□□□ -1.78
CLK3-219ENST00000567805 A0A1B0GTI1 187 aa3.93□□□□□ -1.78
CLK3-219ENST00000567805 A0A1B0GUS0 222 aa3.93□□□□□ -1.78
CLK3-219ENST00000567805 A0A1W2PPH5 198 aa3.93□□□□□ -1.78
CLK3-219ENST00000567805 A0A1W2PQ09 198 aa3.93□□□□□ -1.78
CLK3-219ENST00000567805 PQLC2LA1A4F0 135 aa3.93□□□□□ -1.78
CLK3-219ENST00000567805 METTL15A6NJ78 407 aa3.93□□□□□ -1.78
CLK3-219ENST00000567805 SAC3D1A6NKF1 404 aa3.93□□□□□ -1.78
CLK3-219ENST00000567805 J3QT63 122 aa3.93□□□□□ -1.78
CLK3-219ENST00000567805 SLC1A7O00341 560 aa3.93□□□□□ -1.78
CLK3-219ENST00000567805 MAGEB4O15481 346 aaPredicted RBP3.93□□□□□ -1.78
CLK3-219ENST00000567805 SYT7O43581 403 aa3.93□□□□□ -1.78
CLK3-219ENST00000567805 SPRY1O43609 319 aaPredicted RBP3.93□□□□□ -1.78
CLK3-219ENST00000567805 SYNGR1O43759 233 aa3.93□□□□□ -1.78
CLK3-219ENST00000567805 NOS1APO75052 506 aaPredicted RBP3.93□□□□□ -1.78
CLK3-219ENST00000567805 SULT1C4O75897 302 aa3.93□□□□□ -1.78
CLK3-219ENST00000567805 RPP14O95059 124 aaKnown RBP3.93□□□□□ -1.78
CLK3-219ENST00000567805 TFF1P04155 84 aa3.93□□□□□ -1.78
CLK3-219ENST00000567805 ALPLP05186 524 aa3.93□□□□□ -1.78
CLK3-219ENST00000567805 CRYBA1P05813 215 aa3.93□□□□□ -1.78
CLK3-219ENST00000567805 FBP1P09467 338 aa3.93□□□□□ -1.78
CLK3-219ENST00000567805 UBCP0CG48 685 aaKnown RBP3.93□□□□□ -1.78
CLK3-219ENST00000567805 NDUFB7P17568 137 aa3.93□□□□□ -1.78
CLK3-219ENST00000567805 MDKP21741 143 aaPredicted RBP3.93□□□□□ -1.78
CLK3-219ENST00000567805 EEF1B2P24534 225 aaKnown RBP3.93□□□□□ -1.78
CLK3-219ENST00000567805 MPZP25189 248 aa3.93□□□□□ -1.78
CLK3-219ENST00000567805 ATP6V1E1P36543 226 aa3.93□□□□□ -1.78
CLK3-219ENST00000567805 IER3P46695 156 aa3.93□□□□□ -1.78
CLK3-219ENST00000567805 HAAOP46952 286 aa3.93□□□□□ -1.78
CLK3-219ENST00000567805 ALDH3A2P51648 485 aa3.93□□□□□ -1.78
CLK3-219ENST00000567805 UBE2E1P51965 193 aa3.93□□□□□ -1.78
CLK3-219ENST00000567805 ACTC1P68032 377 aa3.93□□□□□ -1.78
CLK3-219ENST00000567805 ACTA1P68133 377 aa3.93□□□□□ -1.78
CLK3-219ENST00000567805 ACSM1Q08AH1 577 aa3.93□□□□□ -1.78
CLK3-219ENST00000567805 BLMHQ13867 455 aa3.93□□□□□ -1.78
CLK3-219ENST00000567805 KPNB1Q14974 876 aaKnown RBP3.93□□□□□ -1.78
CLK3-219ENST00000567805 DMRTC1Q5HYR2 192 aa3.93□□□□□ -1.78
CLK3-219ENST00000567805 PRR31Q5SQ13 230 aa3.93□□□□□ -1.78
CLK3-219ENST00000567805 SLC25A30Q5SVS4 291 aa3.93□□□□□ -1.78
CLK3-219ENST00000567805 MEDAGQ5VYS4 303 aa3.93□□□□□ -1.78
CLK3-219ENST00000567805 NCR3LG1Q68D85 454 aa3.93□□□□□ -1.78
CLK3-219ENST00000567805 ZFP1Q6P2D0 407 aa3.93□□□□□ -1.78
CLK3-219ENST00000567805 FIP1L1Q6UN15 594 aaKnown RBP3.93□□□□□ -1.78
CLK3-219ENST00000567805 ACP7Q6ZNF0 438 aa3.93□□□□□ -1.78
CLK3-219ENST00000567805 PLEKHG7Q6ZR37 379 aa3.93□□□□□ -1.78
CLK3-219ENST00000567805 CCDC121Q6ZUS5 278 aa3.93□□□□□ -1.78
CLK3-219ENST00000567805 SSX6Q7RTT6 188 aa3.93□□□□□ -1.78
CLK3-219ENST00000567805 FAM220AQ7Z4H9 259 aa3.93□□□□□ -1.78
CLK3-219ENST00000567805 KCTD20Q7Z5Y7 419 aa3.93□□□□□ -1.78
CLK3-219ENST00000567805 CATSPERDQ86XM0 798 aa3.93□□□□□ -1.78
CLK3-219ENST00000567805 LDLRAD3Q86YD5 345 aa3.93□□□□□ -1.78
CLK3-219ENST00000567805 PDZD9Q8IXQ8 264 aa3.93□□□□□ -1.78
CLK3-219ENST00000567805 C10orf67Q8IYJ2 551 aa3.93□□□□□ -1.78
CLK3-219ENST00000567805 ZNF561Q8N587 486 aa3.93□□□□□ -1.78
CLK3-219ENST00000567805 Q8N7P7 452 aa3.93□□□□□ -1.78
CLK3-219ENST00000567805 ZNRF1Q8ND25 227 aa3.93□□□□□ -1.78
CLK3-219ENST00000567805 TMEM185AQ8NFB2 350 aa3.93□□□□□ -1.78
CLK3-219ENST00000567805 OR10H4Q8NGA5 316 aa3.93□□□□□ -1.78
CLK3-219ENST00000567805 OR5D13Q8NGL4 314 aa3.93□□□□□ -1.78
CLK3-219ENST00000567805 OR4F5Q8NH21 305 aa3.93□□□□□ -1.78
CLK3-219ENST00000567805 PYDC1Q8WXC3 89 aa3.93□□□□□ -1.78
CLK3-219ENST00000567805 DYRK2Q92630 601 aa3.93□□□□□ -1.78
CLK3-219ENST00000567805 RORBQ92753 470 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms