RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 HAAOP46952 286 aa12.02□□□□□ -0.49
FANCA-220ENST00000566409 ISL1P61371 349 aa12.02□□□□□ -0.49
FANCA-220ENST00000566409 ZNF85Q03923 595 aa12.02□□□□□ -0.49
FANCA-220ENST00000566409 METAP1DQ6UB28 335 aaPredicted RBP12.02□□□□□ -0.49
FANCA-220ENST00000566409 FIP1L1Q6UN15 594 aaKnown RBP12.02□□□□□ -0.49
FANCA-220ENST00000566409 CALHM1Q8IU99 346 aa12.02□□□□□ -0.49
FANCA-220ENST00000566409 PRSS35Q8N3Z0 413 aa12.02□□□□□ -0.49
FANCA-220ENST00000566409 CD177Q8N6Q3 437 aa12.02□□□□□ -0.49
FANCA-220ENST00000566409 KIR3DL3Q8N743 410 aa12.02□□□□□ -0.49
FANCA-220ENST00000566409 POC1AQ8NBT0 407 aa12.02□□□□□ -0.49
FANCA-220ENST00000566409 SDSLQ96GA7 329 aa12.02□□□□□ -0.49
FANCA-220ENST00000566409 HRASLS5Q96KN8 279 aa12.02□□□□□ -0.49
FANCA-220ENST00000566409 UNKLQ9H9P5 680 aaKnown RBP12.02□□□□□ -0.49
FANCA-220ENST00000566409 WNK1Q9H4A3 2382 aa12.01□□□□□ -0.49
FANCA-220ENST00000566409 RFPL4AA6NLU0 287 aa12.01□□□□□ -0.49
FANCA-220ENST00000566409 RFPL4AL1F8VTS6 287 aa12.01□□□□□ -0.49
FANCA-220ENST00000566409 J3QRE1 110 aa12.01□□□□□ -0.49
FANCA-220ENST00000566409 EI24O14681 340 aa12.01□□□□□ -0.49
FANCA-220ENST00000566409 NOS1APO75052 506 aaPredicted RBP12.01□□□□□ -0.49
FANCA-220ENST00000566409 ENTPD6O75354 484 aa12.01□□□□□ -0.49
FANCA-220ENST00000566409 SULT1C4O75897 302 aa12.01□□□□□ -0.49
FANCA-220ENST00000566409 IGHV4-59P01825 116 aa12.01□□□□□ -0.49
FANCA-220ENST00000566409 MPZP25189 248 aa12.01□□□□□ -0.49
FANCA-220ENST00000566409 IER3P46695 156 aa12.01□□□□□ -0.49
FANCA-220ENST00000566409 CEBPDP49716 269 aaPredicted RBP12.01□□□□□ -0.49
FANCA-220ENST00000566409 KLRD1Q13241 179 aa12.01□□□□□ -0.49
FANCA-220ENST00000566409 TMED1Q13445 227 aa12.01□□□□□ -0.49
FANCA-220ENST00000566409 ZIK1Q3SY52 487 aaPredicted RBP12.01□□□□□ -0.49
FANCA-220ENST00000566409 C1orf122Q6ZSJ8 110 aa12.01□□□□□ -0.49
FANCA-220ENST00000566409 ANGPTL5Q86XS5 388 aa12.01□□□□□ -0.49
FANCA-220ENST00000566409 BATF2Q8N1L9 274 aa12.01□□□□□ -0.49
FANCA-220ENST00000566409 PNKDQ8N490 385 aa12.01□□□□□ -0.49
FANCA-220ENST00000566409 TMEM86BQ8N661 226 aa12.01□□□□□ -0.49
FANCA-220ENST00000566409 NRIP2Q9BQI9 281 aa12.01□□□□□ -0.49
FANCA-220ENST00000566409 RASL12Q9NYN1 266 aa12.01□□□□□ -0.49
FANCA-220ENST00000566409 USE1Q9NZ43 259 aa12.01□□□□□ -0.49
FANCA-220ENST00000566409 AASSQ9UDR5 926 aa12.01□□□□□ -0.49
FANCA-220ENST00000566409 IGKV1-27A0A075B6S5 117 aa12□□□□□ -0.49
FANCA-220ENST00000566409 A0A1W2PRD5 423 aa12□□□□□ -0.49
FANCA-220ENST00000566409 A0A1W2PRF3 423 aa12□□□□□ -0.49
FANCA-220ENST00000566409 A0A1W2PRM7 423 aa12□□□□□ -0.49
FANCA-220ENST00000566409 ANKRD61A6NGH8 418 aa12□□□□□ -0.49
FANCA-220ENST00000566409 J3QT63 122 aa12□□□□□ -0.49
FANCA-220ENST00000566409 KIR3DL2P43630 455 aa12□□□□□ -0.49
FANCA-220ENST00000566409 CDC42P60953 191 aa12□□□□□ -0.49
FANCA-220ENST00000566409 ERVK11-1P61568 191 aa12□□□□□ -0.49
FANCA-220ENST00000566409 UBE2V2Q15819 145 aa12□□□□□ -0.49
FANCA-220ENST00000566409 TP53I3Q53FA7 332 aa12□□□□□ -0.49
FANCA-220ENST00000566409 SLC25A30Q5SVS4 291 aa12□□□□□ -0.49
FANCA-220ENST00000566409 HCP5Q6MZN7 132 aa12□□□□□ -0.49
FANCA-220ENST00000566409 SHISA2Q6UWI4 295 aa12□□□□□ -0.49
FANCA-220ENST00000566409 LDLRAD3Q86YD5 345 aa12□□□□□ -0.49
FANCA-220ENST00000566409 ZNF573Q86YE8 665 aa12□□□□□ -0.49
FANCA-220ENST00000566409 CMTM4Q8IZR5 234 aa12□□□□□ -0.49
FANCA-220ENST00000566409 RDH10Q8IZV5 341 aa12□□□□□ -0.49
FANCA-220ENST00000566409 TMEM185AQ8NFB2 350 aa12□□□□□ -0.49
FANCA-220ENST00000566409 SGMS2Q8NHU3 365 aa12□□□□□ -0.49
FANCA-220ENST00000566409 SSMEM1Q8WWF3 244 aa12□□□□□ -0.49
FANCA-220ENST00000566409 TRUB1Q8WWH5 349 aaKnown RBP12□□□□□ -0.49
FANCA-220ENST00000566409 HES4Q9HCC6 221 aa12□□□□□ -0.49
FANCA-220ENST00000566409 C19orf12Q9NSK7 152 aa12□□□□□ -0.49
FANCA-220ENST00000566409 C1RLQ9NZP8 487 aa12□□□□□ -0.49
FANCA-220ENST00000566409 POMT1Q9Y6A1 747 aa12□□□□□ -0.49
FANCA-220ENST00000566409 POM121CA8CG34 1229 aa11.99□□□□□ -0.49
FANCA-220ENST00000566409 F8VVB4 439 aa11.99□□□□□ -0.49
FANCA-220ENST00000566409 F8VWA3 439 aa11.99□□□□□ -0.49
FANCA-220ENST00000566409 M0R1W7 72 aa11.99□□□□□ -0.49
FANCA-220ENST00000566409 SYT7O43581 403 aa11.99□□□□□ -0.49
FANCA-220ENST00000566409 PRDX2P32119 198 aa11.99□□□□□ -0.49
FANCA-220ENST00000566409 ATP6V1E1P36543 226 aa11.99□□□□□ -0.49
FANCA-220ENST00000566409 ALDH3A2P51648 485 aa11.99□□□□□ -0.49
FANCA-220ENST00000566409 SNRPGP62308 76 aaKnown RBP11.99□□□□□ -0.49
FANCA-220ENST00000566409 ZFP1Q6P2D0 407 aa11.99□□□□□ -0.49
FANCA-220ENST00000566409 CCDC121Q6ZUS5 278 aa11.99□□□□□ -0.49
FANCA-220ENST00000566409 CBR4Q8N4T8 237 aa11.99□□□□□ -0.49
FANCA-220ENST00000566409 C11orf42Q8N5U0 333 aa11.99□□□□□ -0.49
FANCA-220ENST00000566409 TRMT10AQ8TBZ6 339 aaKnown RBP11.99□□□□□ -0.49
FANCA-220ENST00000566409 RFKQ969G6 155 aa11.99□□□□□ -0.49
FANCA-220ENST00000566409 MBOAT4Q96T53 435 aa11.99□□□□□ -0.49
FANCA-220ENST00000566409 MMP24Q9Y5R2 645 aa11.99□□□□□ -0.49
FANCA-220ENST00000566409 NOTCH1P46531 2555 aa11.98□□□□□ -0.49
FANCA-220ENST00000566409 A0A1W2PQ09 198 aa11.98□□□□□ -0.49
FANCA-220ENST00000566409 NPFFO15130 113 aa11.98□□□□□ -0.49
FANCA-220ENST00000566409 GABRB1P18505 474 aa11.98□□□□□ -0.49
FANCA-220ENST00000566409 OR12D2P58182 307 aa11.98□□□□□ -0.49
FANCA-220ENST00000566409 NANOS3P60323 173 aaKnown RBP11.98□□□□□ -0.49
FANCA-220ENST00000566409 SRSF4Q08170 494 aaKnown RBP11.98□□□□□ -0.49
FANCA-220ENST00000566409 TAF9Q16594 264 aa11.98□□□□□ -0.49
FANCA-220ENST00000566409 OCLNQ16625 522 aa11.98□□□□□ -0.49
FANCA-220ENST00000566409 SMIM21Q3B7S5 101 aa11.98□□□□□ -0.49
FANCA-220ENST00000566409 TBC1D15Q8TC07 691 aa11.98□□□□□ -0.49
FANCA-220ENST00000566409 NPRL2Q8WTW4 380 aa11.98□□□□□ -0.49
FANCA-220ENST00000566409 C17orf50Q8WW18 174 aa11.98□□□□□ -0.49
FANCA-220ENST00000566409 RNFT2Q96EX2 444 aa11.98□□□□□ -0.49
FANCA-220ENST00000566409 AJUBAQ96IF1 538 aa11.98□□□□□ -0.49
FANCA-220ENST00000566409 SLC29A1Q99808 456 aa11.98□□□□□ -0.49
FANCA-220ENST00000566409 PKIBQ9C010 78 aa11.98□□□□□ -0.49
FANCA-220ENST00000566409 IMPAD1Q9NX62 359 aa11.98□□□□□ -0.49
FANCA-220ENST00000566409 MTCH1Q9NZJ7 389 aa11.98□□□□□ -0.49
FANCA-220ENST00000566409 ZNRD1Q9P1U0 126 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms