RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 WFDC1Q9HC57 220 aa3.2□□□□□ -1.9
CNOT1-209ENST00000566240 PSG11Q9UQ72 335 aa3.2□□□□□ -1.9
CNOT1-209ENST00000566240 CFL2Q9Y281 166 aa3.2□□□□□ -1.9
CNOT1-209ENST00000566240 SIGLEC9Q9Y336 463 aa3.2□□□□□ -1.9
CNOT1-209ENST00000566240 AFDNP55196 1824 aaKnown RBP3.2□□□□□ -1.9
CNOT1-209ENST00000566240 PLCH1Q4KWH8 1693 aa3.2□□□□□ -1.9
CNOT1-209ENST00000566240 STRCP1A6NGW2 1772 aa3.2□□□□□ -1.9
CNOT1-209ENST00000566240 COL16A1Q07092 1604 aaPredicted RBP3.19□□□□□ -1.9
CNOT1-209ENST00000566240 XIRP1Q702N8 1843 aaKnown RBP3.19□□□□□ -1.9
CNOT1-209ENST00000566240 WNK3Q9BYP7 1800 aa3.19□□□□□ -1.9
CNOT1-209ENST00000566240 TRAV8-7A0A075B6U6 113 aa3.19□□□□□ -1.9
CNOT1-209ENST00000566240 IGHV2OR16-5A0A0B4J2B6 119 aa3.19□□□□□ -1.9
CNOT1-209ENST00000566240 TVP23AA6NH52 213 aa3.19□□□□□ -1.9
CNOT1-209ENST00000566240 K7EN84 100 aa3.19□□□□□ -1.9
CNOT1-209ENST00000566240 RAD51BO15315 384 aa3.19□□□□□ -1.9
CNOT1-209ENST00000566240 SOCS1O15524 211 aa3.19□□□□□ -1.9
CNOT1-209ENST00000566240 ZMPSTE24O75844 475 aa3.19□□□□□ -1.9
CNOT1-209ENST00000566240 NPPAP01160 153 aa3.19□□□□□ -1.9
CNOT1-209ENST00000566240 SLC35G6P0C7Q6 338 aa3.19□□□□□ -1.9
CNOT1-209ENST00000566240 OR56A5P0C7T3 313 aa3.19□□□□□ -1.9
CNOT1-209ENST00000566240 MAGP20916 626 aa3.19□□□□□ -1.9
CNOT1-209ENST00000566240 PCK1P35558 622 aa3.19□□□□□ -1.9
CNOT1-209ENST00000566240 KIR3DL2P43630 455 aa3.19□□□□□ -1.9
CNOT1-209ENST00000566240 MLF1P58340 268 aa3.19□□□□□ -1.9
CNOT1-209ENST00000566240 IFITM3Q01628 133 aa3.19□□□□□ -1.9
CNOT1-209ENST00000566240 PNOCQ13519 176 aa3.19□□□□□ -1.9
CNOT1-209ENST00000566240 FAM27D1Q5T7N8 215 aa3.19□□□□□ -1.9
CNOT1-209ENST00000566240 STEAP4Q687X5 459 aa3.19□□□□□ -1.9
CNOT1-209ENST00000566240 ZFP2Q6ZN57 461 aa3.19□□□□□ -1.9
CNOT1-209ENST00000566240 SLC16A13Q7RTY0 426 aa3.19□□□□□ -1.9
CNOT1-209ENST00000566240 SAXO1Q8IYX7 474 aa3.19□□□□□ -1.9
CNOT1-209ENST00000566240 SLC34A3Q8N130 599 aa3.19□□□□□ -1.9
CNOT1-209ENST00000566240 OR4K5Q8NGD3 323 aa3.19□□□□□ -1.9
CNOT1-209ENST00000566240 OR4D6Q8NGJ1 314 aa3.19□□□□□ -1.9
CNOT1-209ENST00000566240 OR6K2Q8NGY2 324 aa3.19□□□□□ -1.9
CNOT1-209ENST00000566240 OR52P1PQ8NH57 321 aa3.19□□□□□ -1.9
CNOT1-209ENST00000566240 LGALS14Q8TCE9 139 aa3.19□□□□□ -1.9
CNOT1-209ENST00000566240 GGTLC1Q9BX51 225 aa3.19□□□□□ -1.9
CNOT1-209ENST00000566240 ULBP2Q9BZM5 246 aa3.19□□□□□ -1.9
CNOT1-209ENST00000566240 FGF23Q9GZV9 251 aaPredicted RBP3.19□□□□□ -1.9
CNOT1-209ENST00000566240 C6orf50Q9HD87 102 aa3.19□□□□□ -1.9
CNOT1-209ENST00000566240 ZNF355PQ9NSJ1 428 aa3.19□□□□□ -1.9
CNOT1-209ENST00000566240 RBFOX1Q9NWB1 397 aaKnown RBP3.19□□□□□ -1.9
CNOT1-209ENST00000566240 TMEM14AQ9Y6G1 99 aa3.19□□□□□ -1.9
CNOT1-209ENST00000566240 TMEM94Q12767 1356 aa3.19□□□□□ -1.9
CNOT1-209ENST00000566240 SIPA1L3O60292 1781 aaPredicted RBP3.19□□□□□ -1.9
CNOT1-209ENST00000566240 STRCQ7RTU9 1775 aa3.19□□□□□ -1.9
CNOT1-209ENST00000566240 COL14A1Q05707 1796 aaKnown RBP3.18□□□□□ -1.9
CNOT1-209ENST00000566240 IGKV6D-41A0A0C4DH26 115 aa3.18□□□□□ -1.9
CNOT1-209ENST00000566240 ZNF705GA8MUZ8 300 aaPredicted RBP3.18□□□□□ -1.9
CNOT1-209ENST00000566240 RSPH10B2B2RC85 870 aa3.18□□□□□ -1.9
CNOT1-209ENST00000566240 BPY2O14599 106 aa3.18□□□□□ -1.9
CNOT1-209ENST00000566240 SNAI2O43623 268 aa3.18□□□□□ -1.9
CNOT1-209ENST00000566240 GLSO94925 669 aaPredicted RBP3.18□□□□□ -1.9
CNOT1-209ENST00000566240 TRBV12-3P01733 135 aa3.18□□□□□ -1.9
CNOT1-209ENST00000566240 RSPH10BP0C881 870 aa3.18□□□□□ -1.9
CNOT1-209ENST00000566240 CXCR1P25024 350 aa3.18□□□□□ -1.9
CNOT1-209ENST00000566240 LOXP28300 417 aaPredicted RBP3.18□□□□□ -1.9
CNOT1-209ENST00000566240 APLNRP35414 380 aa3.18□□□□□ -1.9
CNOT1-209ENST00000566240 GALR1P47211 349 aa3.18□□□□□ -1.9
CNOT1-209ENST00000566240 MTPNP58546 118 aa3.18□□□□□ -1.9
CNOT1-209ENST00000566240 PPIDQ08752 370 aaKnown RBP3.18□□□□□ -1.9
CNOT1-209ENST00000566240 SIGLEC14Q08ET2 396 aa3.18□□□□□ -1.9
CNOT1-209ENST00000566240 DYNC1I2Q13409 638 aaKnown RBP3.18□□□□□ -1.9
CNOT1-209ENST00000566240 MAD2L1BPQ15013 274 aaPredicted RBP3.18□□□□□ -1.9
CNOT1-209ENST00000566240 Q6P435 159 aa3.18□□□□□ -1.9
CNOT1-209ENST00000566240 OPN5Q6U736 354 aa3.18□□□□□ -1.9
CNOT1-209ENST00000566240 EPGNQ6UW88 154 aa3.18□□□□□ -1.9
CNOT1-209ENST00000566240 Q6ZR03 302 aa3.18□□□□□ -1.9
CNOT1-209ENST00000566240 WDR86Q86TI4 376 aa3.18□□□□□ -1.9
CNOT1-209ENST00000566240 MDP1Q86V88 176 aa3.18□□□□□ -1.9
CNOT1-209ENST00000566240 ENTHD1Q8IYW4 607 aa3.18□□□□□ -1.9
CNOT1-209ENST00000566240 SLC7A5P1Q8MH63 180 aa3.18□□□□□ -1.9
CNOT1-209ENST00000566240 OTUD6BQ8N6M0 293 aa3.18□□□□□ -1.9
CNOT1-209ENST00000566240 OR10G2Q8NGC3 310 aa3.18□□□□□ -1.9
CNOT1-209ENST00000566240 OR1J4Q8NGS1 313 aa3.18□□□□□ -1.9
CNOT1-209ENST00000566240 ING5Q8WYH8 240 aa3.18□□□□□ -1.9
CNOT1-209ENST00000566240 GHSRQ92847 366 aa3.18□□□□□ -1.9
CNOT1-209ENST00000566240 NARS2Q96I59 477 aaKnown RBP3.18□□□□□ -1.9
CNOT1-209ENST00000566240 ZNF414Q96IQ9 312 aa3.18□□□□□ -1.9
CNOT1-209ENST00000566240 RBBP8Q99708 897 aa3.18□□□□□ -1.9
CNOT1-209ENST00000566240 KCNS3Q9BQ31 491 aa3.18□□□□□ -1.9
CNOT1-209ENST00000566240 EMC6Q9BV81 110 aa3.18□□□□□ -1.9
CNOT1-209ENST00000566240 FRMD8P1Q9BZ68 369 aaPredicted RBP3.18□□□□□ -1.9
CNOT1-209ENST00000566240 VAX2Q9UIW0 290 aa3.18□□□□□ -1.9
CNOT1-209ENST00000566240 NDRG2Q9UN36 371 aaKnown RBP3.18□□□□□ -1.9
CNOT1-209ENST00000566240 PHLPP1O60346 1717 aa3.18□□□□□ -1.9
CNOT1-209ENST00000566240 ROBO1Q9Y6N7 1651 aa3.17□□□□□ -1.9
CNOT1-209ENST00000566240 PXDNQ92626 1479 aa3.17□□□□□ -1.9
CNOT1-209ENST00000566240 IGLV3-16A0A075B6K0 115 aa3.17□□□□□ -1.9
CNOT1-209ENST00000566240 TRAV8-4A0A0B4J246 113 aa3.17□□□□□ -1.9
CNOT1-209ENST00000566240 TMEM223A0PJW6 202 aa3.17□□□□□ -1.9
CNOT1-209ENST00000566240 C5orf63A6NC05 138 aa3.17□□□□□ -1.9
CNOT1-209ENST00000566240 HSBP1L1C9JCN9 74 aa3.17□□□□□ -1.9
CNOT1-209ENST00000566240 MANBAO00462 879 aa3.17□□□□□ -1.9
CNOT1-209ENST00000566240 MYL12BO14950 172 aa3.17□□□□□ -1.9
CNOT1-209ENST00000566240 CHST10O43529 356 aa3.17□□□□□ -1.9
CNOT1-209ENST00000566240 FOXH1O75593 365 aa3.17□□□□□ -1.9
CNOT1-209ENST00000566240 SERPINB7O75635 380 aa3.17□□□□□ -1.9
CNOT1-209ENST00000566240 CTDNEP1O95476 244 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 209.9 ms