RNA–Protein interactions for RNA: ENST00000565887.1

SHCBP1-204, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 5

Gene SHCBP1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-204ENST00000565887 BOLLQ8N9W6 283 aaKnown RBP10.54□□□□□ -0.72
SHCBP1-204ENST00000565887 DEFB108BQ8NET1 73 aa10.54□□□□□ -0.72
SHCBP1-204ENST00000565887 OR51A4Q8NGJ6 313 aa10.54□□□□□ -0.72
SHCBP1-204ENST00000565887 TMEM186Q96B77 213 aa10.54□□□□□ -0.72
SHCBP1-204ENST00000565887 TMIGD2Q96BF3 282 aa10.54□□□□□ -0.72
SHCBP1-204ENST00000565887 OPALINQ96PE5 141 aa10.54□□□□□ -0.72
SHCBP1-204ENST00000565887 LPAR3Q9UBY5 353 aa10.54□□□□□ -0.72
SHCBP1-204ENST00000565887 ZNF469Q96JG9 3925 aaPredicted RBP10.54□□□□□ -0.72
SHCBP1-204ENST00000565887 A8MXK9 166 aa10.53□□□□□ -0.72
SHCBP1-204ENST00000565887 C3orf80F5H4A9 247 aa10.53□□□□□ -0.72
SHCBP1-204ENST00000565887 H3BSH0 61 aa10.53□□□□□ -0.72
SHCBP1-204ENST00000565887 J3QLI3 93 aa10.53□□□□□ -0.72
SHCBP1-204ENST00000565887 TNFRSF13BO14836 293 aaPredicted RBP10.53□□□□□ -0.72
SHCBP1-204ENST00000565887 SULT1B1O43704 296 aa10.53□□□□□ -0.72
SHCBP1-204ENST00000565887 GPX5O75715 221 aa10.53□□□□□ -0.72
SHCBP1-204ENST00000565887 ECDO95905 644 aaPredicted RBP10.53□□□□□ -0.72
SHCBP1-204ENST00000565887 ALDOBP05062 364 aa10.53□□□□□ -0.72
SHCBP1-204ENST00000565887 PGA5P0DJD9 388 aa10.53□□□□□ -0.72
SHCBP1-204ENST00000565887 HNF1AP20823 631 aa10.53□□□□□ -0.72
SHCBP1-204ENST00000565887 AZGP1P25311 298 aaKnown RBP10.53□□□□□ -0.72
SHCBP1-204ENST00000565887 IL2RGP31785 369 aa10.53□□□□□ -0.72
SHCBP1-204ENST00000565887 GNB2P62879 340 aa10.53□□□□□ -0.72
SHCBP1-204ENST00000565887 PPP3R1P63098 170 aa10.53□□□□□ -0.72
SHCBP1-204ENST00000565887 SMIM21Q3B7S5 101 aa10.53□□□□□ -0.72
SHCBP1-204ENST00000565887 SFRP4Q6FHJ7 346 aaPredicted RBP10.53□□□□□ -0.72
SHCBP1-204ENST00000565887 XAF1Q6GPH4 301 aa10.53□□□□□ -0.72
SHCBP1-204ENST00000565887 ZSCAN4Q8NAM6 433 aaPredicted RBP10.53□□□□□ -0.72
SHCBP1-204ENST00000565887 POC1AQ8NBT0 407 aa10.53□□□□□ -0.72
SHCBP1-204ENST00000565887 OR10AC1Q8NH08 325 aa10.53□□□□□ -0.72
SHCBP1-204ENST00000565887 TMEM106AQ96A25 262 aa10.53□□□□□ -0.72
SHCBP1-204ENST00000565887 DMRTB1Q96MA1 342 aa10.53□□□□□ -0.72
SHCBP1-204ENST00000565887 SSBP3Q9BWW4 388 aaPredicted RBP10.53□□□□□ -0.72
SHCBP1-204ENST00000565887 FGF23Q9GZV9 251 aaPredicted RBP10.53□□□□□ -0.72
SHCBP1-204ENST00000565887 METTL17Q9H7H0 456 aaPredicted RBP10.53□□□□□ -0.72
SHCBP1-204ENST00000565887 PAK1IP1Q9NWT1 392 aaPredicted RBP10.53□□□□□ -0.72
SHCBP1-204ENST00000565887 CLN8Q9UBY8 286 aa10.53□□□□□ -0.72
SHCBP1-204ENST00000565887 SIRT4Q9Y6E7 314 aaPredicted RBP10.53□□□□□ -0.72
SHCBP1-204ENST00000565887 TEP1Q99973 2627 aaKnown RBP10.53□□□□□ -0.72
SHCBP1-204ENST00000565887 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.52□□□□□ -0.722e-10■■■■■ 39.2
SHCBP1-204ENST00000565887 MTORP42345 2549 aa10.52□□□□□ -0.72
SHCBP1-204ENST00000565887 TLN2Q9Y4G6 2542 aa10.52□□□□□ -0.72
SHCBP1-204ENST00000565887 IGKV1-9A0A0C4DH69 117 aa10.52□□□□□ -0.73
SHCBP1-204ENST00000565887 A0A0G2JMP0 313 aa10.52□□□□□ -0.73
SHCBP1-204ENST00000565887 TRBV5-5A0A0J9YX44 114 aa10.52□□□□□ -0.73
SHCBP1-204ENST00000565887 A0A0X1KG70 313 aa10.52□□□□□ -0.73
SHCBP1-204ENST00000565887 FAM157AC9JC47 383 aa10.52□□□□□ -0.73
SHCBP1-204ENST00000565887 AKR7A2O43488 359 aa10.52□□□□□ -0.73
SHCBP1-204ENST00000565887 ADAM20O43506 726 aa10.52□□□□□ -0.73
SHCBP1-204ENST00000565887 ZNF205O95201 554 aa10.52□□□□□ -0.73
SHCBP1-204ENST00000565887 LALBAP00709 142 aa10.52□□□□□ -0.73
SHCBP1-204ENST00000565887 LIPFP07098 398 aa10.52□□□□□ -0.73
SHCBP1-204ENST00000565887 HCKP08631 526 aa10.52□□□□□ -0.73
SHCBP1-204ENST00000565887 PSMA1P25786 263 aaKnown RBP10.52□□□□□ -0.73
SHCBP1-204ENST00000565887 PITPNBP48739 271 aa10.52□□□□□ -0.73
SHCBP1-204ENST00000565887 BMXP51813 675 aa10.52□□□□□ -0.73
SHCBP1-204ENST00000565887 TPBGQ13641 420 aa10.52□□□□□ -0.73
SHCBP1-204ENST00000565887 TBCEQ15813 527 aaPredicted RBP10.52□□□□□ -0.73
SHCBP1-204ENST00000565887 FAM201AQ5SY85 155 aa10.52□□□□□ -0.73
SHCBP1-204ENST00000565887 ZNF529Q6P280 563 aa10.52□□□□□ -0.73
SHCBP1-204ENST00000565887 FIP1L1Q6UN15 594 aaKnown RBP10.52□□□□□ -0.73
SHCBP1-204ENST00000565887 ANGPTL5Q86XS5 388 aa10.52□□□□□ -0.73
SHCBP1-204ENST00000565887 CDH26Q8IXH8 852 aa10.52□□□□□ -0.73
SHCBP1-204ENST00000565887 SAXO1Q8IYX7 474 aa10.52□□□□□ -0.73
SHCBP1-204ENST00000565887 OR4M2Q8NGB6 313 aa10.52□□□□□ -0.73
SHCBP1-204ENST00000565887 TRMT10AQ8TBZ6 339 aaKnown RBP10.52□□□□□ -0.73
SHCBP1-204ENST00000565887 PHYHIPQ92561 330 aa10.52□□□□□ -0.73
SHCBP1-204ENST00000565887 UFD1Q92890 307 aa10.52□□□□□ -0.73
SHCBP1-204ENST00000565887 PGLYRP3Q96LB9 341 aa10.52□□□□□ -0.73
SHCBP1-204ENST00000565887 SEBOXQ9HB31 216 aaPredicted RBP10.52□□□□□ -0.73
SHCBP1-204ENST00000565887 TMEM138Q9NPI0 162 aa10.52□□□□□ -0.73
SHCBP1-204ENST00000565887 PCDHB16Q9NRJ7 776 aa10.52□□□□□ -0.73
SHCBP1-204ENST00000565887 HIF1ANQ9NWT6 349 aa10.52□□□□□ -0.73
SHCBP1-204ENST00000565887 NLKQ9UBE8 527 aa10.52□□□□□ -0.73
SHCBP1-204ENST00000565887 OR5V1Q9UGF6 321 aa10.52□□□□□ -0.73
SHCBP1-204ENST00000565887 CDC42EP3Q9UKI2 254 aa10.52□□□□□ -0.73
SHCBP1-204ENST00000565887 LSM2Q9Y333 95 aaKnown RBP10.52□□□□□ -0.73
SHCBP1-204ENST00000565887 MEGF11A6BM72 1044 aa10.51□□□□□ -0.73
SHCBP1-204ENST00000565887 NKX6-3A6NJ46 265 aa10.51□□□□□ -0.73
SHCBP1-204ENST00000565887 OR2AT4A6NND4 320 aa10.51□□□□□ -0.73
SHCBP1-204ENST00000565887 ZNF879B4DU55 563 aa10.51□□□□□ -0.73
SHCBP1-204ENST00000565887 TRAPPC2LH3BP13 241 aa10.51□□□□□ -0.73
SHCBP1-204ENST00000565887 TMPRSS2O15393 492 aa10.51□□□□□ -0.73
SHCBP1-204ENST00000565887 RHBDL1O75783 438 aa10.51□□□□□ -0.73
SHCBP1-204ENST00000565887 NXPH2O95156 264 aa10.51□□□□□ -0.73
SHCBP1-204ENST00000565887 GYPAP02724 150 aa10.51□□□□□ -0.73
SHCBP1-204ENST00000565887 ZNF16P17020 682 aaPredicted RBP10.51□□□□□ -0.73
SHCBP1-204ENST00000565887 CD80P33681 288 aa10.51□□□□□ -0.73
SHCBP1-204ENST00000565887 TGFBR2P37173 567 aa10.51□□□□□ -0.73
SHCBP1-204ENST00000565887 RANBP1P43487 201 aa10.51□□□□□ -0.73
SHCBP1-204ENST00000565887 SOX2P48431 317 aa10.51□□□□□ -0.73
SHCBP1-204ENST00000565887 MLLT11Q13015 90 aaPredicted RBP10.51□□□□□ -0.73
SHCBP1-204ENST00000565887 PDZK1IP1Q13113 114 aa10.51□□□□□ -0.73
SHCBP1-204ENST00000565887 LRRC10Q5BKY1 277 aa10.51□□□□□ -0.73
SHCBP1-204ENST00000565887 OR13C9Q8NGT0 318 aa10.51□□□□□ -0.73
SHCBP1-204ENST00000565887 NPRL2Q8WTW4 380 aa10.51□□□□□ -0.73
SHCBP1-204ENST00000565887 FCGR1BQ92637 280 aa10.51□□□□□ -0.73
SHCBP1-204ENST00000565887 CEP19Q96LK0 163 aa10.51□□□□□ -0.73
SHCBP1-204ENST00000565887 OR5M11Q96RB7 305 aa10.51□□□□□ -0.73
SHCBP1-204ENST00000565887 MGLLQ99685 303 aa10.51□□□□□ -0.73
SHCBP1-204ENST00000565887 NRIP2Q9BQI9 281 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms