RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 EFNB1P98172 346 aa6.96□□□□□ -1.3
CAPN3-213ENST00000565173 FLOT2Q14254 428 aa6.96□□□□□ -1.3
CAPN3-213ENST00000565173 HERPUD1Q15011 391 aa6.96□□□□□ -1.3
CAPN3-213ENST00000565173 LY6EQ16553 131 aa6.96□□□□□ -1.3
CAPN3-213ENST00000565173 LRRC75BQ2VPJ9 315 aa6.96□□□□□ -1.3
CAPN3-213ENST00000565173 BEAN1Q3B7T3 259 aa6.96□□□□□ -1.3
CAPN3-213ENST00000565173 KPRPQ5T749 579 aaPredicted RBP6.96□□□□□ -1.3
CAPN3-213ENST00000565173 ZBTB37Q5TC79 503 aa6.96□□□□□ -1.3
CAPN3-213ENST00000565173 TMEM42Q69YG0 159 aa6.96□□□□□ -1.3
CAPN3-213ENST00000565173 KCTD18Q6PI47 426 aaPredicted RBP6.96□□□□□ -1.3
CAPN3-213ENST00000565173 KRT77Q7Z794 578 aa6.96□□□□□ -1.3
CAPN3-213ENST00000565173 SPATA24Q86W54 205 aa6.96□□□□□ -1.3
CAPN3-213ENST00000565173 ZNF679Q8IYX0 411 aa6.96□□□□□ -1.3
CAPN3-213ENST00000565173 FAM185AQ8N0U4 392 aa6.96□□□□□ -1.3
CAPN3-213ENST00000565173 DYNAPQ8N1N2 210 aa6.96□□□□□ -1.3
CAPN3-213ENST00000565173 POC1AQ8NBT0 407 aa6.96□□□□□ -1.3
CAPN3-213ENST00000565173 TMEM185AQ8NFB2 350 aa6.96□□□□□ -1.3
CAPN3-213ENST00000565173 OR51G2Q8NGK0 314 aa6.96□□□□□ -1.3
CAPN3-213ENST00000565173 FAM81AQ8TBF8 368 aa6.96□□□□□ -1.3
CAPN3-213ENST00000565173 FAM234AQ9H0X4 552 aa6.96□□□□□ -1.3
CAPN3-213ENST00000565173 SLC25A19Q9HC21 320 aa6.96□□□□□ -1.3
CAPN3-213ENST00000565173 HES4Q9HCC6 221 aa6.96□□□□□ -1.3
CAPN3-213ENST00000565173 NUFIP1Q9UHK0 495 aaKnown RBP6.96□□□□□ -1.3
CAPN3-213ENST00000565173 POMPQ9Y244 141 aa6.96□□□□□ -1.3
CAPN3-213ENST00000565173 PIGLQ9Y2B2 252 aa6.96□□□□□ -1.3
CAPN3-213ENST00000565173 TET2Q6N021 2002 aaPredicted RBP6.96□□□□□ -1.3
CAPN3-213ENST00000565173 A0A1B0GTI1 187 aa6.95□□□□□ -1.3
CAPN3-213ENST00000565173 AQP12BA6NM10 295 aa6.95□□□□□ -1.3
CAPN3-213ENST00000565173 VGLL3A8MV65 326 aa6.95□□□□□ -1.3
CAPN3-213ENST00000565173 GNGT2O14610 69 aa6.95□□□□□ -1.3
CAPN3-213ENST00000565173 ZNF254O75437 659 aa6.95□□□□□ -1.3
CAPN3-213ENST00000565173 NRASP01111 189 aa6.95□□□□□ -1.3
CAPN3-213ENST00000565173 TTRP02766 147 aa6.95□□□□□ -1.3
CAPN3-213ENST00000565173 MRPL3P09001 348 aaKnown RBP6.95□□□□□ -1.3
CAPN3-213ENST00000565173 ANXA8P13928 327 aa6.95□□□□□ -1.3
CAPN3-213ENST00000565173 CCL3L1P16619 93 aa6.95□□□□□ -1.3
CAPN3-213ENST00000565173 CEBPDP49716 269 aaPredicted RBP6.95□□□□□ -1.3
CAPN3-213ENST00000565173 DAPP51397 102 aa6.95□□□□□ -1.3
CAPN3-213ENST00000565173 BMXP51813 675 aa6.95□□□□□ -1.3
CAPN3-213ENST00000565173 DLX6P56179 175 aa6.95□□□□□ -1.3
CAPN3-213ENST00000565173 ERVK11-1P61568 191 aa6.95□□□□□ -1.3
CAPN3-213ENST00000565173 RPS7P62081 194 aaKnown RBP6.95□□□□□ -1.3
CAPN3-213ENST00000565173 GABPB1Q06547 395 aaPredicted RBP6.95□□□□□ -1.3
CAPN3-213ENST00000565173 MFGE8Q08431 387 aaPredicted RBP6.95□□□□□ -1.3
CAPN3-213ENST00000565173 SNAPC1Q16533 368 aa6.95□□□□□ -1.3
CAPN3-213ENST00000565173 LDLRAD2Q5SZI1 272 aa6.95□□□□□ -1.3
CAPN3-213ENST00000565173 SAMD5Q5TGI4 173 aa6.95□□□□□ -1.3
CAPN3-213ENST00000565173 PLCXD3Q63HM9 321 aa6.95□□□□□ -1.3
CAPN3-213ENST00000565173 C11orf88Q6PI97 169 aa6.95□□□□□ -1.3
CAPN3-213ENST00000565173 Q6ZSR3 168 aa6.95□□□□□ -1.3
CAPN3-213ENST00000565173 Q6ZTK2 550 aa6.95□□□□□ -1.3
CAPN3-213ENST00000565173 ASRGL1Q7L266 308 aa6.95□□□□□ -1.3
CAPN3-213ENST00000565173 AQP12AQ8IXF9 295 aa6.95□□□□□ -1.3
CAPN3-213ENST00000565173 ZNF561Q8N587 486 aa6.95□□□□□ -1.3
CAPN3-213ENST00000565173 C11orf44Q8N8P7 122 aa6.95□□□□□ -1.3
CAPN3-213ENST00000565173 OR4M1Q8NGD0 313 aa6.95□□□□□ -1.3
CAPN3-213ENST00000565173 OR14K1Q8NGZ2 314 aa6.95□□□□□ -1.3
CAPN3-213ENST00000565173 WIPF2Q8TF74 440 aaPredicted RBP6.95□□□□□ -1.3
CAPN3-213ENST00000565173 OR8B4Q96RC9 309 aa6.95□□□□□ -1.3
CAPN3-213ENST00000565173 NRIP2Q9BQI9 281 aa6.95□□□□□ -1.3
CAPN3-213ENST00000565173 MROQ9BYG7 248 aa6.95□□□□□ -1.3
CAPN3-213ENST00000565173 RANBP3Q9H6Z4 567 aaPredicted RBP6.95□□□□□ -1.3
CAPN3-213ENST00000565173 HEXA-AS1Q9H8Q6 139 aa6.95□□□□□ -1.3
CAPN3-213ENST00000565173 ZNF556Q9HAH1 456 aa6.95□□□□□ -1.3
CAPN3-213ENST00000565173 SERTAD4Q9NUC0 356 aa6.95□□□□□ -1.3
CAPN3-213ENST00000565173 V9GYS6 101 aa6.95□□□□□ -1.3
CAPN3-213ENST00000565173 PQLC2LA1A4F0 135 aa6.94□□□□□ -1.3
CAPN3-213ENST00000565173 A6NIN4 97 aa6.94□□□□□ -1.3
CAPN3-213ENST00000565173 C17orf98A8MV24 154 aa6.94□□□□□ -1.3
CAPN3-213ENST00000565173 J3QT63 122 aa6.94□□□□□ -1.3
CAPN3-213ENST00000565173 DLGAP1O14490 977 aa6.94□□□□□ -1.3
CAPN3-213ENST00000565173 MAGEB4O15481 346 aaPredicted RBP6.94□□□□□ -1.3
CAPN3-213ENST00000565173 PRKYO43930 277 aa6.94□□□□□ -1.3
CAPN3-213ENST00000565173 E2F6O75461 281 aa6.94□□□□□ -1.3
CAPN3-213ENST00000565173 CIB2O75838 187 aa6.94□□□□□ -1.3
CAPN3-213ENST00000565173 DHRS3O75911 302 aa6.94□□□□□ -1.3
CAPN3-213ENST00000565173 TK1P04183 234 aa6.94□□□□□ -1.3
CAPN3-213ENST00000565173 MPZP25189 248 aa6.94□□□□□ -1.3
CAPN3-213ENST00000565173 HAAOP46952 286 aa6.94□□□□□ -1.3
CAPN3-213ENST00000565173 RAB13P51153 203 aa6.94□□□□□ -1.3
CAPN3-213ENST00000565173 RIDAP52758 137 aaKnown RBP6.94□□□□□ -1.3
CAPN3-213ENST00000565173 CAPZA1P52907 286 aa6.94□□□□□ -1.3
CAPN3-213ENST00000565173 CRISP1P54107 249 aa6.94□□□□□ -1.3
CAPN3-213ENST00000565173 ZNF273Q14593 569 aa6.94□□□□□ -1.3
CAPN3-213ENST00000565173 PTGES3Q15185 160 aaKnown RBP6.94□□□□□ -1.3
CAPN3-213ENST00000565173 SMIM21Q3B7S5 101 aa6.94□□□□□ -1.3
CAPN3-213ENST00000565173 FBLN7Q53RD9 439 aa6.94□□□□□ -1.3
CAPN3-213ENST00000565173 ZNF684Q5T5D7 378 aa6.94□□□□□ -1.3
CAPN3-213ENST00000565173 C1orf146Q5VVC0 180 aa6.94□□□□□ -1.3
CAPN3-213ENST00000565173 FAHD1Q6P587 224 aa6.94□□□□□ -1.3
CAPN3-213ENST00000565173 CCBE1Q6UXH8 406 aaPredicted RBP6.94□□□□□ -1.3
CAPN3-213ENST00000565173 BCDIN3DQ7Z5W3 292 aaKnown RBP6.94□□□□□ -1.3
CAPN3-213ENST00000565173 LHFPL4Q7Z7J7 247 aa6.94□□□□□ -1.3
CAPN3-213ENST00000565173 ZNF573Q86YE8 665 aa6.94□□□□□ -1.3
CAPN3-213ENST00000565173 CALHM1Q8IU99 346 aa6.94□□□□□ -1.3
CAPN3-213ENST00000565173 ELMOD2Q8IZ81 293 aa6.94□□□□□ -1.3
CAPN3-213ENST00000565173 Q8N2B8 174 aa6.94□□□□□ -1.3
CAPN3-213ENST00000565173 KLHDC1Q8N7A1 406 aa6.94□□□□□ -1.3
CAPN3-213ENST00000565173 OR4C13Q8NGP0 309 aa6.94□□□□□ -1.3
CAPN3-213ENST00000565173 OR2T27Q8NH04 317 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms