RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 PRSS35Q8N3Z0 413 aa11.29□□□□□ -0.6
VPS9D1-204ENST00000565023 H1FXQ92522 213 aaKnown RBP11.29□□□□□ -0.6
VPS9D1-204ENST00000565023 TAF15Q92804 592 aaKnown RBP eCLIP11.29□□□□□ -0.6
VPS9D1-204ENST00000565023 ZDHHC16Q969W1 377 aa11.29□□□□□ -0.6
VPS9D1-204ENST00000565023 PELI1Q96FA3 418 aa11.29□□□□□ -0.6
VPS9D1-204ENST00000565023 C4orf36Q96KX1 117 aa11.29□□□□□ -0.6
VPS9D1-204ENST00000565023 ABCB9Q9NP78 766 aa11.29□□□□□ -0.6
VPS9D1-204ENST00000565023 GPR173Q9NS66 373 aa11.29□□□□□ -0.6
VPS9D1-204ENST00000565023 PLCXD1Q9NUJ7 323 aa11.29□□□□□ -0.6
VPS9D1-204ENST00000565023 ONECUT1Q9UBC0 465 aa11.29□□□□□ -0.6
VPS9D1-204ENST00000565023 RRP15Q9Y3B9 282 aaKnown RBP11.29□□□□□ -0.6
VPS9D1-204ENST00000565023 ZNF879B4DU55 563 aa11.28□□□□□ -0.6
VPS9D1-204ENST00000565023 J3QLW9 94 aa11.28□□□□□ -0.6
VPS9D1-204ENST00000565023 NDUFB3O43676 98 aa11.28□□□□□ -0.6
VPS9D1-204ENST00000565023 MTRF1O75570 445 aaKnown RBP11.28□□□□□ -0.6
VPS9D1-204ENST00000565023 DHRS3O75911 302 aa11.28□□□□□ -0.6
VPS9D1-204ENST00000565023 PIPP12273 146 aaPredicted RBP11.28□□□□□ -0.6
VPS9D1-204ENST00000565023 MUC1P15941 1255 aaPredicted RBP11.28□□□□□ -0.6
VPS9D1-204ENST00000565023 ZNF19P17023 458 aa11.28□□□□□ -0.6
VPS9D1-204ENST00000565023 AMY2BP19961 511 aa11.28□□□□□ -0.6
VPS9D1-204ENST00000565023 CCL1P22362 96 aa11.28□□□□□ -0.6
VPS9D1-204ENST00000565023 GLRA1P23415 457 aa11.28□□□□□ -0.6
VPS9D1-204ENST00000565023 KIR3DL2P43630 455 aa11.28□□□□□ -0.6
VPS9D1-204ENST00000565023 GABRA2P47869 451 aa11.28□□□□□ -0.6
VPS9D1-204ENST00000565023 GNG3P63215 75 aa11.28□□□□□ -0.6
VPS9D1-204ENST00000565023 METTL11BQ5VVY1 283 aa11.28□□□□□ -0.6
VPS9D1-204ENST00000565023 HAGHLQ6PII5 290 aaPredicted RBP11.28□□□□□ -0.6
VPS9D1-204ENST00000565023 IZUMO2Q6UXV1 221 aa11.28□□□□□ -0.6
VPS9D1-204ENST00000565023 PNLDC1Q8NA58 520 aaKnown RBP11.28□□□□□ -0.6
VPS9D1-204ENST00000565023 OR2G2Q8NGZ5 317 aa11.28□□□□□ -0.6
VPS9D1-204ENST00000565023 GGHQ92820 318 aa11.28□□□□□ -0.6
VPS9D1-204ENST00000565023 LHX4Q969G2 390 aa11.28□□□□□ -0.6
VPS9D1-204ENST00000565023 C1orf147Q96MC9 270 aaPredicted RBP11.28□□□□□ -0.6
VPS9D1-204ENST00000565023 WDFY2Q96P53 400 aa11.28□□□□□ -0.6
VPS9D1-204ENST00000565023 TBX15Q96SF7 602 aa11.28□□□□□ -0.6
VPS9D1-204ENST00000565023 TLNRD1Q9H1K6 362 aa11.28□□□□□ -0.6
VPS9D1-204ENST00000565023 ISG20L2Q9H9L3 353 aaKnown RBP11.28□□□□□ -0.6
VPS9D1-204ENST00000565023 ENPP5Q9UJA9 477 aa11.28□□□□□ -0.6
VPS9D1-204ENST00000565023 DIMT1Q9UNQ2 313 aaKnown RBP11.28□□□□□ -0.6
VPS9D1-204ENST00000565023 V9GYS6 101 aa11.28□□□□□ -0.6
VPS9D1-204ENST00000565023 NKX6-3A6NJ46 265 aa11.27□□□□□ -0.61
VPS9D1-204ENST00000565023 DHRS7CA6NNS2 312 aa11.27□□□□□ -0.61
VPS9D1-204ENST00000565023 PLATP00750 562 aa11.27□□□□□ -0.61
VPS9D1-204ENST00000565023 NRASP01111 189 aa11.27□□□□□ -0.61
VPS9D1-204ENST00000565023 PPIAL4GP0DN37 164 aa11.27□□□□□ -0.61
VPS9D1-204ENST00000565023 MYF6P23409 242 aa11.27□□□□□ -0.61
VPS9D1-204ENST00000565023 PRTN3P24158 256 aa11.27□□□□□ -0.61
VPS9D1-204ENST00000565023 HSPA13P48723 471 aa11.27□□□□□ -0.61
VPS9D1-204ENST00000565023 ETV1P50549 477 aa11.27□□□□□ -0.61
VPS9D1-204ENST00000565023 CCR9P51686 369 aa11.27□□□□□ -0.61
VPS9D1-204ENST00000565023 NANOS3P60323 173 aaKnown RBP11.27□□□□□ -0.61
VPS9D1-204ENST00000565023 MRPL28Q13084 256 aaKnown RBP11.27□□□□□ -0.61
VPS9D1-204ENST00000565023 DEFB112Q30KQ8 113 aa11.27□□□□□ -0.61
VPS9D1-204ENST00000565023 STUMQ69YW2 141 aa11.27□□□□□ -0.61
VPS9D1-204ENST00000565023 C3orf56Q8N813 242 aa11.27□□□□□ -0.61
VPS9D1-204ENST00000565023 OR10Z1Q8NGY1 313 aa11.27□□□□□ -0.61
VPS9D1-204ENST00000565023 OR14K1Q8NGZ2 314 aa11.27□□□□□ -0.61
VPS9D1-204ENST00000565023 TMEM80Q96HE8 168 aa11.27□□□□□ -0.61
VPS9D1-204ENST00000565023 ZNF488Q96MN9 340 aa11.27□□□□□ -0.61
VPS9D1-204ENST00000565023 ANKRD60Q9BZ19 345 aa11.27□□□□□ -0.61
VPS9D1-204ENST00000565023 CNOT2Q9NZN8 540 aaKnown RBP11.27□□□□□ -0.61
VPS9D1-204ENST00000565023 FRRS1LQ9P0K9 344 aa11.27□□□□□ -0.61
VPS9D1-204ENST00000565023 NLKQ9UBE8 527 aa11.27□□□□□ -0.61
VPS9D1-204ENST00000565023 KAAG1Q9UBP8 84 aa11.27□□□□□ -0.61
VPS9D1-204ENST00000565023 PSORS1C1Q9UIG5 152 aa11.27□□□□□ -0.61
VPS9D1-204ENST00000565023 RPUSD1Q9UJJ7 312 aaKnown RBP11.27□□□□□ -0.61
VPS9D1-204ENST00000565023 TMEM89A2RUT3 159 aa11.26□□□□□ -0.61
VPS9D1-204ENST00000565023 EFCAB10A6NFE3 127 aa11.26□□□□□ -0.61
VPS9D1-204ENST00000565023 XPNPEP2O43895 674 aa11.26□□□□□ -0.61
VPS9D1-204ENST00000565023 ISG15P05161 165 aa11.26□□□□□ -0.61
VPS9D1-204ENST00000565023 LIPFP07098 398 aa11.26□□□□□ -0.61
VPS9D1-204ENST00000565023 HTR1AP08908 422 aa11.26□□□□□ -0.61
VPS9D1-204ENST00000565023 UBCP0CG48 685 aaKnown RBP11.26□□□□□ -0.61
VPS9D1-204ENST00000565023 NDUFB7P17568 137 aa11.26□□□□□ -0.61
VPS9D1-204ENST00000565023 CFPP27918 469 aa11.26□□□□□ -0.61
VPS9D1-204ENST00000565023 VHLP40337 213 aa11.26□□□□□ -0.61
VPS9D1-204ENST00000565023 DLX1P56177 255 aa11.26□□□□□ -0.61
VPS9D1-204ENST00000565023 CEACAM21Q3KPI0 293 aa11.26□□□□□ -0.61
VPS9D1-204ENST00000565023 LRRC10Q5BKY1 277 aa11.26□□□□□ -0.61
VPS9D1-204ENST00000565023 TMEM42Q69YG0 159 aa11.26□□□□□ -0.61
VPS9D1-204ENST00000565023 CCDC54Q8NEL0 328 aa11.26□□□□□ -0.61
VPS9D1-204ENST00000565023 BPIFB6Q8NFQ5 453 aa11.26□□□□□ -0.61
VPS9D1-204ENST00000565023 TRMT10AQ8TBZ6 339 aaKnown RBP11.26□□□□□ -0.61
VPS9D1-204ENST00000565023 HAVCR2Q8TDQ0 301 aa11.26□□□□□ -0.61
VPS9D1-204ENST00000565023 NPRL2Q8WTW4 380 aa11.26□□□□□ -0.61
VPS9D1-204ENST00000565023 TMIGD2Q96BF3 282 aa11.26□□□□□ -0.61
VPS9D1-204ENST00000565023 GAFA1Q96PS6 74 aa11.26□□□□□ -0.61
VPS9D1-204ENST00000565023 OR51I2Q9H344 312 aa11.26□□□□□ -0.61
VPS9D1-204ENST00000565023 CNTD2Q9H8S5 307 aa11.26□□□□□ -0.61
VPS9D1-204ENST00000565023 ELL3Q9HB65 397 aaPredicted RBP11.26□□□□□ -0.61
VPS9D1-204ENST00000565023 SIRT7Q9NRC8 400 aa11.26□□□□□ -0.61
VPS9D1-204ENST00000565023 FKBP14Q9NWM8 211 aa11.26□□□□□ -0.61
VPS9D1-204ENST00000565023 CAB39Q9Y376 341 aaPredicted RBP11.26□□□□□ -0.61
VPS9D1-204ENST00000565023 EXOSC1Q9Y3B2 195 aaKnown RBP11.26□□□□□ -0.61
VPS9D1-204ENST00000565023 CENPVL3A0A0U1RRI6 287 aa11.25□□□□□ -0.61
VPS9D1-204ENST00000565023 A0A1B0GVI7 797 aa11.25□□□□□ -0.61
VPS9D1-204ENST00000565023 A0A1W2PRD5 423 aa11.25□□□□□ -0.61
VPS9D1-204ENST00000565023 A0A1W2PRF3 423 aa11.25□□□□□ -0.61
VPS9D1-204ENST00000565023 A0A1W2PRM7 423 aa11.25□□□□□ -0.61
VPS9D1-204ENST00000565023 OR5B21A6NL26 309 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms