RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 A0A0U1RQK1 487 aa16.42■□□□□ 0.22
SHCBP1-203ENST00000564272 E9PQ18 207 aa16.42■□□□□ 0.22
SHCBP1-203ENST00000564272 SYT7O43581 403 aa16.42■□□□□ 0.22
SHCBP1-203ENST00000564272 MELTFP08582 738 aa16.42■□□□□ 0.22
SHCBP1-203ENST00000564272 CAV3P56539 151 aa16.42■□□□□ 0.22
SHCBP1-203ENST00000564272 SMIM21Q3B7S5 101 aa16.42■□□□□ 0.22
SHCBP1-203ENST00000564272 FAM220AQ7Z4H9 259 aa16.42■□□□□ 0.22
SHCBP1-203ENST00000564272 ZNF573Q86YE8 665 aa16.42■□□□□ 0.22
SHCBP1-203ENST00000564272 CMTM4Q8IZR5 234 aa16.42■□□□□ 0.22
SHCBP1-203ENST00000564272 PRSS35Q8N3Z0 413 aa16.42■□□□□ 0.22
SHCBP1-203ENST00000564272 Q8N7P7 452 aa16.42■□□□□ 0.22
SHCBP1-203ENST00000564272 NPRL2Q8WTW4 380 aa16.42■□□□□ 0.22
SHCBP1-203ENST00000564272 TRUB1Q8WWH5 349 aaKnown RBP16.42■□□□□ 0.22
SHCBP1-203ENST00000564272 RNF166Q96A37 237 aaPredicted RBP16.42■□□□□ 0.22
SHCBP1-203ENST00000564272 RNFT2Q96EX2 444 aa16.42■□□□□ 0.22
SHCBP1-203ENST00000564272 PLEKHA1Q9HB21 404 aa16.42■□□□□ 0.22
SHCBP1-203ENST00000564272 AASSQ9UDR5 926 aa16.42■□□□□ 0.22
SHCBP1-203ENST00000564272 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.42■□□□□ 0.22
SHCBP1-203ENST00000564272 MAB21L2Q9Y586 359 aa16.42■□□□□ 0.22
SHCBP1-203ENST00000564272 LOC107986453A0A1B0GWG9 222 aa16.41■□□□□ 0.22
SHCBP1-203ENST00000564272 A0A1W2PQ09 198 aa16.41■□□□□ 0.22
SHCBP1-203ENST00000564272 ANKRD61A6NGH8 418 aa16.41■□□□□ 0.22
SHCBP1-203ENST00000564272 PGA5P0DJD9 388 aa16.41■□□□□ 0.22
SHCBP1-203ENST00000564272 KIR3DL2P43630 455 aa16.41■□□□□ 0.22
SHCBP1-203ENST00000564272 CEBPDP49716 269 aaPredicted RBP16.41■□□□□ 0.22
SHCBP1-203ENST00000564272 ISL1P61371 349 aa16.41■□□□□ 0.22
SHCBP1-203ENST00000564272 SNRPGP62308 76 aaKnown RBP16.41■□□□□ 0.22
SHCBP1-203ENST00000564272 KLRD1Q13241 179 aa16.41■□□□□ 0.22
SHCBP1-203ENST00000564272 C16orf87Q6PH81 154 aa16.41■□□□□ 0.22
SHCBP1-203ENST00000564272 PIP4P2Q8N4L2 257 aa16.41■□□□□ 0.22
SHCBP1-203ENST00000564272 SDSLQ96GA7 329 aa16.41■□□□□ 0.22
SHCBP1-203ENST00000564272 NRIP2Q9BQI9 281 aa16.41■□□□□ 0.22
SHCBP1-203ENST00000564272 RASL12Q9NYN1 266 aa16.41■□□□□ 0.22
SHCBP1-203ENST00000564272 FAM230AA0A1W2PPH8 454 aa16.4■□□□□ 0.22
SHCBP1-203ENST00000564272 RFPL4AA6NLU0 287 aa16.4■□□□□ 0.22
SHCBP1-203ENST00000564272 RFPL4AL1F8VTS6 287 aa16.4■□□□□ 0.22
SHCBP1-203ENST00000564272 OMGP23515 440 aa16.4■□□□□ 0.22
SHCBP1-203ENST00000564272 CAPZA1P52907 286 aa16.4■□□□□ 0.22
SHCBP1-203ENST00000564272 SLC25A30Q5SVS4 291 aa16.4■□□□□ 0.22
SHCBP1-203ENST00000564272 ANGPTL5Q86XS5 388 aa16.4■□□□□ 0.22
SHCBP1-203ENST00000564272 CALHM1Q8IU99 346 aa16.4■□□□□ 0.22
SHCBP1-203ENST00000564272 RDH10Q8IZV5 341 aa16.4■□□□□ 0.22
SHCBP1-203ENST00000564272 CD177Q8N6Q3 437 aa16.4■□□□□ 0.22
SHCBP1-203ENST00000564272 DMRTB1Q96MA1 342 aa16.4■□□□□ 0.22
SHCBP1-203ENST00000564272 CHIAQ9BZP6 476 aa16.4■□□□□ 0.22
SHCBP1-203ENST00000564272 S100A14Q9HCY8 104 aa16.4■□□□□ 0.22
SHCBP1-203ENST00000564272 POLDIP2Q9Y2S7 368 aa16.4■□□□□ 0.22
SHCBP1-203ENST00000564272 A0A1W2PRD5 423 aa16.39■□□□□ 0.21
SHCBP1-203ENST00000564272 A0A1W2PRF3 423 aa16.39■□□□□ 0.21
SHCBP1-203ENST00000564272 A0A1W2PRM7 423 aa16.39■□□□□ 0.21
SHCBP1-203ENST00000564272 FAM181BA6NEQ2 426 aa16.39■□□□□ 0.21
SHCBP1-203ENST00000564272 RNASEK-C17orf49H0YIS7 233 aa16.39■□□□□ 0.21
SHCBP1-203ENST00000564272 J3QRE1 110 aa16.39■□□□□ 0.21
SHCBP1-203ENST00000564272 EBAG9O00559 213 aa16.39■□□□□ 0.21
SHCBP1-203ENST00000564272 NXPH2O95156 264 aa16.39■□□□□ 0.21
SHCBP1-203ENST00000564272 MPZP25189 248 aa16.39■□□□□ 0.21
SHCBP1-203ENST00000564272 ACTC1P68032 377 aa16.39■□□□□ 0.21
SHCBP1-203ENST00000564272 ACTA1P68133 377 aa16.39■□□□□ 0.21
SHCBP1-203ENST00000564272 UBE2V2Q15819 145 aa16.39■□□□□ 0.21
SHCBP1-203ENST00000564272 OCLNQ16625 522 aa16.39■□□□□ 0.21
SHCBP1-203ENST00000564272 MEDAGQ5VYS4 303 aa16.39■□□□□ 0.21
SHCBP1-203ENST00000564272 FIP1L1Q6UN15 594 aaKnown RBP16.39■□□□□ 0.21
SHCBP1-203ENST00000564272 FAM185AQ8N0U4 392 aa16.39■□□□□ 0.21
SHCBP1-203ENST00000564272 SLC29A1Q99808 456 aa16.39■□□□□ 0.21
SHCBP1-203ENST00000564272 ADI1Q9BV57 179 aa16.39■□□□□ 0.21
SHCBP1-203ENST00000564272 ZNF747Q9BV97 191 aa16.39■□□□□ 0.21
SHCBP1-203ENST00000564272 UNKLQ9H9P5 680 aaKnown RBP16.39■□□□□ 0.21
SHCBP1-203ENST00000564272 C19orf12Q9NSK7 152 aa16.39■□□□□ 0.21
SHCBP1-203ENST00000564272 GMPPBQ9Y5P6 360 aa16.39■□□□□ 0.21
SHCBP1-203ENST00000564272 NBEAL1Q6ZS30 2694 aa16.39■□□□□ 0.21
SHCBP1-203ENST00000564272 IGKV1-27A0A075B6S5 117 aa16.38■□□□□ 0.21
SHCBP1-203ENST00000564272 DAPL1A0PJW8 107 aa16.38■□□□□ 0.21
SHCBP1-203ENST00000564272 NOS1APO75052 506 aaPredicted RBP16.38■□□□□ 0.21
SHCBP1-203ENST00000564272 IGHV4-59P01825 116 aa16.38■□□□□ 0.21
SHCBP1-203ENST00000564272 UBCP0CG48 685 aaKnown RBP16.38■□□□□ 0.21
SHCBP1-203ENST00000564272 GABRB1P18505 474 aa16.38■□□□□ 0.21
SHCBP1-203ENST00000564272 METAP1DQ6UB28 335 aaPredicted RBP16.38■□□□□ 0.21
SHCBP1-203ENST00000564272 PNKDQ8N490 385 aa16.38■□□□□ 0.21
SHCBP1-203ENST00000564272 OR2G2Q8NGZ5 317 aa16.38■□□□□ 0.21
SHCBP1-203ENST00000564272 SSMEM1Q8WWF3 244 aa16.38■□□□□ 0.21
SHCBP1-203ENST00000564272 TNFRSF14Q92956 283 aa16.38■□□□□ 0.21
SHCBP1-203ENST00000564272 C9orf16Q9BUW7 83 aa16.38■□□□□ 0.21
SHCBP1-203ENST00000564272 PKIBQ9C010 78 aa16.38■□□□□ 0.21
SHCBP1-203ENST00000564272 CHST5Q9GZS9 411 aa16.38■□□□□ 0.21
SHCBP1-203ENST00000564272 HES4Q9HCC6 221 aa16.38■□□□□ 0.21
SHCBP1-203ENST00000564272 OR14J1Q9UGF5 321 aa16.38■□□□□ 0.21
SHCBP1-203ENST00000564272 SLC7A11Q9UPY5 501 aa16.38■□□□□ 0.21
SHCBP1-203ENST00000564272 M0R1W7 72 aa16.37■□□□□ 0.21
SHCBP1-203ENST00000564272 SLC16A6O15403 523 aa16.37■□□□□ 0.21
SHCBP1-203ENST00000564272 GATBO75879 557 aaKnown RBP16.37■□□□□ 0.21
SHCBP1-203ENST00000564272 MDKP21741 143 aaPredicted RBP16.37■□□□□ 0.21
SHCBP1-203ENST00000564272 PRDX2P32119 198 aa16.37■□□□□ 0.21
SHCBP1-203ENST00000564272 OR12D2P58182 307 aa16.37■□□□□ 0.21
SHCBP1-203ENST00000564272 ZNF91Q05481 1191 aa16.37■□□□□ 0.21
SHCBP1-203ENST00000564272 IL24Q13007 206 aa16.37■□□□□ 0.21
SHCBP1-203ENST00000564272 C10orf67Q8IYJ2 551 aa16.37■□□□□ 0.21
SHCBP1-203ENST00000564272 ENTHD1Q8IYW4 607 aa16.37■□□□□ 0.21
SHCBP1-203ENST00000564272 TMEM86BQ8N661 226 aa16.37■□□□□ 0.21
SHCBP1-203ENST00000564272 CCDC54Q8NEL0 328 aa16.37■□□□□ 0.21
SHCBP1-203ENST00000564272 LGALS12Q96DT0 336 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms