RNA–Protein interactions for RNA: ENST00000564247.1

CMTM3-208, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,127 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-208ENST00000564247 IDNKQ5T6J7 187 aa14.37□□□□□ -0.11
CMTM3-208ENST00000564247 HES5Q5TA89 166 aa14.37□□□□□ -0.11
CMTM3-208ENST00000564247 DTX2Q86UW9 622 aa14.37□□□□□ -0.11
CMTM3-208ENST00000564247 ANGPTL5Q86XS5 388 aa14.37□□□□□ -0.11
CMTM3-208ENST00000564247 MKXQ8IYA7 352 aa14.37□□□□□ -0.11
CMTM3-208ENST00000564247 RFT1Q96AA3 541 aa14.37□□□□□ -0.11
CMTM3-208ENST00000564247 GFI1Q99684 422 aa14.37□□□□□ -0.11
CMTM3-208ENST00000564247 VRK1Q99986 396 aaPredicted RBP14.37□□□□□ -0.11
CMTM3-208ENST00000564247 TRAF4Q9BUZ4 470 aaPredicted RBP14.37□□□□□ -0.11
CMTM3-208ENST00000564247 RAB1BQ9H0U4 201 aa14.37□□□□□ -0.11
CMTM3-208ENST00000564247 CCDC59Q9P031 241 aaKnown RBP14.37□□□□□ -0.11
CMTM3-208ENST00000564247 STEAP1Q9UHE8 339 aa14.37□□□□□ -0.11
CMTM3-208ENST00000564247 DAPK2Q9UIK4 370 aa14.37□□□□□ -0.11
CMTM3-208ENST00000564247 ING4Q9UNL4 249 aa14.37□□□□□ -0.11
CMTM3-208ENST00000564247 ARFGEF3Q5TH69 2177 aa14.36□□□□□ -0.11
CMTM3-208ENST00000564247 AIPO00170 330 aa14.36□□□□□ -0.11
CMTM3-208ENST00000564247 SLC17A2O00624 439 aa14.36□□□□□ -0.11
CMTM3-208ENST00000564247 CD55P08174 381 aa14.36□□□□□ -0.11
CMTM3-208ENST00000564247 TNFRSF1AP19438 455 aa14.36□□□□□ -0.11
CMTM3-208ENST00000564247 PTGFRP43088 359 aa14.36□□□□□ -0.11
CMTM3-208ENST00000564247 POU3F4P49335 361 aa14.36□□□□□ -0.11
CMTM3-208ENST00000564247 CAPZA1P52907 286 aa14.36□□□□□ -0.11
CMTM3-208ENST00000564247 CNPY1Q3B7I2 92 aa14.36□□□□□ -0.11
CMTM3-208ENST00000564247 FAM76BQ5HYJ3 339 aa14.36□□□□□ -0.11
CMTM3-208ENST00000564247 ZNF671Q8TAW3 534 aa14.36□□□□□ -0.11
CMTM3-208ENST00000564247 TNFAIP8L1Q8WVP5 186 aa14.36□□□□□ -0.11
CMTM3-208ENST00000564247 ACOT12Q8WYK0 555 aa14.36□□□□□ -0.11
CMTM3-208ENST00000564247 MEGF10Q96KG7 1140 aa14.36□□□□□ -0.11
CMTM3-208ENST00000564247 OR2V2Q96R30 315 aa14.36□□□□□ -0.11
CMTM3-208ENST00000564247 MRI1Q9BV20 369 aa14.36□□□□□ -0.11
CMTM3-208ENST00000564247 OR51I2Q9H344 312 aa14.36□□□□□ -0.11
CMTM3-208ENST00000564247 CNTD2Q9H8S5 307 aa14.36□□□□□ -0.11
CMTM3-208ENST00000564247 PCDHB16Q9NRJ7 776 aa14.36□□□□□ -0.11
CMTM3-208ENST00000564247 MRPS28Q9Y2Q9 187 aaKnown RBP14.36□□□□□ -0.11
CMTM3-208ENST00000564247 IGKV1-27A0A075B6S5 117 aa14.35□□□□□ -0.11
CMTM3-208ENST00000564247 A0A0G2JK05 382 aa14.35□□□□□ -0.11
CMTM3-208ENST00000564247 LOC100289279A0A1B0GTE1 492 aa14.35□□□□□ -0.11
CMTM3-208ENST00000564247 A6NLC8 198 aa14.35□□□□□ -0.11
CMTM3-208ENST00000564247 CD8AP01732 235 aa14.35□□□□□ -0.11
CMTM3-208ENST00000564247 UBBP0CG47 229 aa14.35□□□□□ -0.11
CMTM3-208ENST00000564247 PDZK1IP1Q13113 114 aa14.35□□□□□ -0.11
CMTM3-208ENST00000564247 MAB21L1Q13394 359 aa14.35□□□□□ -0.11
CMTM3-208ENST00000564247 AWAT2Q6E213 333 aa14.35□□□□□ -0.11
CMTM3-208ENST00000564247 MZT2AQ6P582 158 aa14.35□□□□□ -0.11
CMTM3-208ENST00000564247 HAGHLQ6PII5 290 aaPredicted RBP14.35□□□□□ -0.11
CMTM3-208ENST00000564247 NR2C2APQ86WQ0 139 aa14.35□□□□□ -0.11
CMTM3-208ENST00000564247 LYPD6Q86Y78 171 aa14.35□□□□□ -0.11
CMTM3-208ENST00000564247 ZSCAN4Q8NAM6 433 aaPredicted RBP14.35□□□□□ -0.11
CMTM3-208ENST00000564247 SCCPDHQ8NBX0 429 aa14.35□□□□□ -0.11
CMTM3-208ENST00000564247 OR51F2Q8NH61 342 aa14.35□□□□□ -0.11
CMTM3-208ENST00000564247 ERGIC1Q969X5 290 aa14.35□□□□□ -0.11
CMTM3-208ENST00000564247 KCTD12Q96CX2 325 aaKnown RBP14.35□□□□□ -0.11
CMTM3-208ENST00000564247 PKIBQ9C010 78 aa14.35□□□□□ -0.11
CMTM3-208ENST00000564247 FGF23Q9GZV9 251 aaPredicted RBP14.35□□□□□ -0.11
CMTM3-208ENST00000564247 FN3KRPQ9HA64 309 aa14.35□□□□□ -0.11
CMTM3-208ENST00000564247 ELL3Q9HB65 397 aaPredicted RBP14.35□□□□□ -0.11
CMTM3-208ENST00000564247 ABRACLQ9P1F3 81 aa14.35□□□□□ -0.11
CMTM3-208ENST00000564247 GHRLQ9UBU3 117 aa14.35□□□□□ -0.11
CMTM3-208ENST00000564247 POLDIP2Q9Y2S7 368 aa14.35□□□□□ -0.11
CMTM3-208ENST00000564247 SETD2Q9BYW2 2564 aaPredicted RBP14.35□□□□□ -0.11
CMTM3-208ENST00000564247 PLATP00750 562 aa14.34□□□□□ -0.11
CMTM3-208ENST00000564247 SLC2A2P11168 524 aaPredicted RBP14.34□□□□□ -0.11
CMTM3-208ENST00000564247 ARSBP15848 533 aa14.34□□□□□ -0.11
CMTM3-208ENST00000564247 OR3A4PP47883 348 aa14.34□□□□□ -0.11
CMTM3-208ENST00000564247 ATP5J2P56134 94 aa14.34□□□□□ -0.11
CMTM3-208ENST00000564247 CCL8P80075 99 aa14.34□□□□□ -0.11
CMTM3-208ENST00000564247 GPR176Q14439 515 aa14.34□□□□□ -0.11
CMTM3-208ENST00000564247 C11orf71Q6IPW1 123 aa14.34□□□□□ -0.11
CMTM3-208ENST00000564247 GLIPR1L1Q6UWM5 242 aa14.34□□□□□ -0.11
CMTM3-208ENST00000564247 SLC25A26Q70HW3 274 aa14.34□□□□□ -0.11
CMTM3-208ENST00000564247 SAXO1Q8IYX7 474 aa14.34□□□□□ -0.11
CMTM3-208ENST00000564247 ZCCHC24Q8N2G6 241 aaKnown RBP14.34□□□□□ -0.11
CMTM3-208ENST00000564247 OR4D6Q8NGJ1 314 aa14.34□□□□□ -0.11
CMTM3-208ENST00000564247 OR5D18Q8NGL1 313 aa14.34□□□□□ -0.11
CMTM3-208ENST00000564247 ITLN1Q8WWA0 313 aa14.34□□□□□ -0.11
CMTM3-208ENST00000564247 C18orf12Q96KH6 178 aa14.34□□□□□ -0.11
CMTM3-208ENST00000564247 Q96MF0 132 aa14.34□□□□□ -0.11
CMTM3-208ENST00000564247 CACNG6Q9BXT2 260 aa14.34□□□□□ -0.11
CMTM3-208ENST00000564247 BARHL1Q9BZE3 327 aa14.34□□□□□ -0.11
CMTM3-208ENST00000564247 METTL9Q9H1A3 318 aa14.34□□□□□ -0.11
CMTM3-208ENST00000564247 ZFHX3Q15911 3703 aa14.33□□□□□ -0.11
CMTM3-208ENST00000564247 IGHV3-64DA0A0J9YX35 117 aa14.33□□□□□ -0.12
CMTM3-208ENST00000564247 TRAPPC2LH3BP13 241 aa14.33□□□□□ -0.12
CMTM3-208ENST00000564247 J3QT63 122 aa14.33□□□□□ -0.12
CMTM3-208ENST00000564247 CDIPTO14735 213 aa14.33□□□□□ -0.12
CMTM3-208ENST00000564247 SPRY1O43609 319 aaPredicted RBP14.33□□□□□ -0.12
CMTM3-208ENST00000564247 ZNF780AO75290 641 aaPredicted RBP14.33□□□□□ -0.12
CMTM3-208ENST00000564247 PTBP3O95758 552 aaKnown RBP14.33□□□□□ -0.12
CMTM3-208ENST00000564247 CALCBP10092 127 aa14.33□□□□□ -0.12
CMTM3-208ENST00000564247 CFPP27918 469 aa14.33□□□□□ -0.12
CMTM3-208ENST00000564247 GATA4P43694 442 aa14.33□□□□□ -0.12
CMTM3-208ENST00000564247 ZP1P60852 638 aa14.33□□□□□ -0.12
CMTM3-208ENST00000564247 IL24Q13007 206 aa14.33□□□□□ -0.12
CMTM3-208ENST00000564247 ZNF154Q13106 437 aa14.33□□□□□ -0.12
CMTM3-208ENST00000564247 DYNC1I2Q13409 638 aaKnown RBP14.33□□□□□ -0.12
CMTM3-208ENST00000564247 P2RY14Q15391 338 aa14.33□□□□□ -0.12
CMTM3-208ENST00000564247 RSU1Q15404 277 aa14.33□□□□□ -0.12
CMTM3-208ENST00000564247 PRAMEF6Q5VXH4 476 aa14.33□□□□□ -0.12
CMTM3-208ENST00000564247 FAM166AQ6J272 317 aa14.33□□□□□ -0.12
CMTM3-208ENST00000564247 RNF144BQ7Z419 303 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms