RNA–Protein interactions for RNA: ENST00000563255.1

CDH11-207, Transcript of cadherin 11, humanhuman

TSL 5

Gene CDH11, Length 545 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-207ENST00000563255 AP3S1Q92572 193 aa12.51□□□□□ -0.41
CDH11-207ENST00000563255 GTF3AQ92664 365 aaKnown RBP12.51□□□□□ -0.41
CDH11-207ENST00000563255 NINJ1Q92982 152 aa12.51□□□□□ -0.41
CDH11-207ENST00000563255 SLC25A28Q96A46 364 aa12.51□□□□□ -0.41
CDH11-207ENST00000563255 ELMOD3Q96FG2 381 aa12.51□□□□□ -0.41
CDH11-207ENST00000563255 TRAF4Q9BUZ4 470 aaPredicted RBP12.51□□□□□ -0.41
CDH11-207ENST00000563255 PKIBQ9C010 78 aa12.51□□□□□ -0.41
CDH11-207ENST00000563255 NXF2Q9GZY0 626 aaKnown RBP12.51□□□□□ -0.41
CDH11-207ENST00000563255 TLNRD1Q9H1K6 362 aa12.51□□□□□ -0.41
CDH11-207ENST00000563255 CLEC4MQ9H2X3 399 aaPredicted RBP12.51□□□□□ -0.41
CDH11-207ENST00000563255 PLEKHF2Q9H8W4 249 aa12.51□□□□□ -0.41
CDH11-207ENST00000563255 DYNLRB1Q9NP97 96 aa12.51□□□□□ -0.41
CDH11-207ENST00000563255 ABRACLQ9P1F3 81 aa12.51□□□□□ -0.41
CDH11-207ENST00000563255 GHRLQ9UBU3 117 aa12.51□□□□□ -0.41
CDH11-207ENST00000563255 DAPK2Q9UIK4 370 aa12.51□□□□□ -0.41
CDH11-207ENST00000563255 A3GALT2U3KPV4 340 aa12.51□□□□□ -0.41
CDH11-207ENST00000563255 A0A075B6Q4 140 aa12.5□□□□□ -0.41
CDH11-207ENST00000563255 CD8AP01732 235 aa12.5□□□□□ -0.41
CDH11-207ENST00000563255 CALCBP10092 127 aa12.5□□□□□ -0.41
CDH11-207ENST00000563255 SLC2A2P11168 524 aaPredicted RBP12.5□□□□□ -0.41
CDH11-207ENST00000563255 BMP4P12644 408 aa12.5□□□□□ -0.41
CDH11-207ENST00000563255 MPZP25189 248 aa12.5□□□□□ -0.41
CDH11-207ENST00000563255 PTGFRP43088 359 aa12.5□□□□□ -0.41
CDH11-207ENST00000563255 GATA4P43694 442 aa12.5□□□□□ -0.41
CDH11-207ENST00000563255 HAAOP46952 286 aa12.5□□□□□ -0.41
CDH11-207ENST00000563255 ZNF154Q13106 437 aa12.5□□□□□ -0.41
CDH11-207ENST00000563255 PDZK1IP1Q13113 114 aa12.5□□□□□ -0.41
CDH11-207ENST00000563255 RAB11BQ15907 218 aa12.5□□□□□ -0.41
CDH11-207ENST00000563255 PCGF3Q3KNV8 242 aa12.5□□□□□ -0.41
CDH11-207ENST00000563255 ZNF404Q494X3 552 aa12.5□□□□□ -0.41
CDH11-207ENST00000563255 ASCL4Q6XD76 172 aa12.5□□□□□ -0.41
CDH11-207ENST00000563255 WDR86Q86TI4 376 aa12.5□□□□□ -0.41
CDH11-207ENST00000563255 CALHM1Q8IU99 346 aa12.5□□□□□ -0.41
CDH11-207ENST00000563255 SAXO1Q8IYX7 474 aa12.5□□□□□ -0.41
CDH11-207ENST00000563255 ZSCAN4Q8NAM6 433 aaPredicted RBP12.5□□□□□ -0.41
CDH11-207ENST00000563255 PXT1Q8NFP0 134 aa12.5□□□□□ -0.41
CDH11-207ENST00000563255 MEGF10Q96KG7 1140 aa12.5□□□□□ -0.41
CDH11-207ENST00000563255 UBTD1Q9HAC8 227 aa12.5□□□□□ -0.41
CDH11-207ENST00000563255 PTTG2Q9NZH5 202 aa12.5□□□□□ -0.41
CDH11-207ENST00000563255 PMF1-BGLAPU3KQ54 211 aa12.5□□□□□ -0.41
CDH11-207ENST00000563255 SOD3P08294 240 aa12.49□□□□□ -0.41
CDH11-207ENST00000563255 ACAA1P09110 424 aaPredicted RBP12.49□□□□□ -0.41
CDH11-207ENST00000563255 UBBP0CG47 229 aa12.49□□□□□ -0.41
CDH11-207ENST00000563255 TNFRSF1AP19438 455 aa12.49□□□□□ -0.41
CDH11-207ENST00000563255 DNASE1P24855 282 aa12.49□□□□□ -0.41
CDH11-207ENST00000563255 OR3A4PP47883 348 aa12.49□□□□□ -0.41
CDH11-207ENST00000563255 TNFAIP6P98066 277 aaPredicted RBP12.49□□□□□ -0.41
CDH11-207ENST00000563255 IL24Q13007 206 aa12.49□□□□□ -0.41
CDH11-207ENST00000563255 AWAT2Q6E213 333 aa12.49□□□□□ -0.41
CDH11-207ENST00000563255 MZT2AQ6P582 158 aa12.49□□□□□ -0.41
CDH11-207ENST00000563255 C20orf204Q6ZNR8 217 aa12.49□□□□□ -0.41
CDH11-207ENST00000563255 C11orf53Q8IXP5 236 aa12.49□□□□□ -0.41
CDH11-207ENST00000563255 MKXQ8IYA7 352 aa12.49□□□□□ -0.41
CDH11-207ENST00000563255 SCCPDHQ8NBX0 429 aa12.49□□□□□ -0.41
CDH11-207ENST00000563255 TNFAIP8L1Q8WVP5 186 aa12.49□□□□□ -0.41
CDH11-207ENST00000563255 ERGIC1Q969X5 290 aa12.49□□□□□ -0.41
CDH11-207ENST00000563255 RFT1Q96AA3 541 aa12.49□□□□□ -0.41
CDH11-207ENST00000563255 OR2V2Q96R30 315 aa12.49□□□□□ -0.41
CDH11-207ENST00000563255 S100A13Q99584 98 aa12.49□□□□□ -0.41
CDH11-207ENST00000563255 MMP27Q9H306 513 aa12.49□□□□□ -0.41
CDH11-207ENST00000563255 LIN7BQ9HAP6 207 aa12.49□□□□□ -0.41
CDH11-207ENST00000563255 SPATA2Q9UM82 520 aa12.49□□□□□ -0.41
CDH11-207ENST00000563255 EDARQ9UNE0 448 aa12.49□□□□□ -0.41
CDH11-207ENST00000563255 PLEKHA6Q9Y2H5 1048 aa12.49□□□□□ -0.41
CDH11-207ENST00000563255 MRPS28Q9Y2Q9 187 aaKnown RBP12.49□□□□□ -0.41
CDH11-207ENST00000563255 J3QT63 122 aa12.48□□□□□ -0.41
CDH11-207ENST00000563255 BPNT1O95861 308 aa12.48□□□□□ -0.41
CDH11-207ENST00000563255 GRPP07492 148 aa12.48□□□□□ -0.41
CDH11-207ENST00000563255 TMEM225BP0DP42 221 aa12.48□□□□□ -0.41
CDH11-207ENST00000563255 ARSBP15848 533 aa12.48□□□□□ -0.41
CDH11-207ENST00000563255 POU3F4P49335 361 aa12.48□□□□□ -0.41
CDH11-207ENST00000563255 GPR176Q14439 515 aa12.48□□□□□ -0.41
CDH11-207ENST00000563255 C2orf76Q3KRA6 126 aa12.48□□□□□ -0.41
CDH11-207ENST00000563255 HAGHLQ6PII5 290 aaPredicted RBP12.48□□□□□ -0.41
CDH11-207ENST00000563255 GLIPR1L1Q6UWM5 242 aa12.48□□□□□ -0.41
CDH11-207ENST00000563255 OR51D1Q8NGF3 324 aa12.48□□□□□ -0.41
CDH11-207ENST00000563255 OR5D18Q8NGL1 313 aa12.48□□□□□ -0.41
CDH11-207ENST00000563255 MCFD2Q8NI22 146 aa12.48□□□□□ -0.41
CDH11-207ENST00000563255 TBC1D15Q8TC07 691 aa12.48□□□□□ -0.41
CDH11-207ENST00000563255 ITLN1Q8WWA0 313 aa12.48□□□□□ -0.41
CDH11-207ENST00000563255 AQP3Q92482 292 aa12.48□□□□□ -0.41
CDH11-207ENST00000563255 FAM3DQ96BQ1 224 aa12.48□□□□□ -0.41
CDH11-207ENST00000563255 CMTM3Q96MX0 182 aa12.48□□□□□ -0.41
CDH11-207ENST00000563255 NKX3-1Q99801 234 aaPredicted RBP12.48□□□□□ -0.41
CDH11-207ENST00000563255 EGLN1Q9GZT9 426 aa12.48□□□□□ -0.41
CDH11-207ENST00000563255 GSX1Q9H4S2 264 aaPredicted RBP12.48□□□□□ -0.41
CDH11-207ENST00000563255 RHOFQ9HBH0 211 aa12.48□□□□□ -0.41
CDH11-207ENST00000563255 IL36GQ9NZH8 169 aa12.48□□□□□ -0.41
CDH11-207ENST00000563255 FBLN5Q9UBX5 448 aa12.48□□□□□ -0.41
CDH11-207ENST00000563255 HRNRQ86YZ3 2850 aaPredicted RBP12.48□□□□□ -0.41
CDH11-207ENST00000563255 SPRY1O43609 319 aaPredicted RBP12.47□□□□□ -0.41
CDH11-207ENST00000563255 ZNF780AO75290 641 aaPredicted RBP12.47□□□□□ -0.41
CDH11-207ENST00000563255 CYB5AP00167 134 aa12.47□□□□□ -0.41
CDH11-207ENST00000563255 CFHR2P36980 270 aa12.47□□□□□ -0.41
CDH11-207ENST00000563255 CLDN12P56749 244 aa12.47□□□□□ -0.41
CDH11-207ENST00000563255 P2RY14Q15391 338 aa12.47□□□□□ -0.41
CDH11-207ENST00000563255 PRAMEF6Q5VXH4 476 aa12.47□□□□□ -0.41
CDH11-207ENST00000563255 SLC25A26Q70HW3 274 aa12.47□□□□□ -0.41
CDH11-207ENST00000563255 OR2W3Q7Z3T1 314 aa12.47□□□□□ -0.41
CDH11-207ENST00000563255 C1QL2Q7Z5L3 287 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms