RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 CFHR2P36980 270 aa15.83■□□□□ 0.12
RAB40C-207ENST00000563109 NR4A2P43354 598 aa15.83■□□□□ 0.12
RAB40C-207ENST00000563109 HNRNPA0Q13151 305 aaKnown RBP15.83■□□□□ 0.12
RAB40C-207ENST00000563109 AVPI1Q5T686 147 aa15.83■□□□□ 0.12
RAB40C-207ENST00000563109 SLC25A26Q70HW3 274 aa15.83■□□□□ 0.12
RAB40C-207ENST00000563109 CALHM1Q8IU99 346 aa15.83■□□□□ 0.12
RAB40C-207ENST00000563109 JAGN1Q8N5M9 183 aa15.83■□□□□ 0.12
RAB40C-207ENST00000563109 WFDC11Q8NEX6 87 aa15.83■□□□□ 0.12
RAB40C-207ENST00000563109 FAM192AQ9GZU8 254 aa15.83■□□□□ 0.12
RAB40C-207ENST00000563109 METTL17Q9H7H0 456 aaPredicted RBP15.83■□□□□ 0.12
RAB40C-207ENST00000563109 WIPI2Q9Y4P8 454 aa15.83■□□□□ 0.12
RAB40C-207ENST00000563109 PPIAL4AQ9Y536 164 aa15.83■□□□□ 0.12
RAB40C-207ENST00000563109 SETXQ7Z333 2677 aaKnown RBP15.83■□□□□ 0.12
RAB40C-207ENST00000563109 PRRC2AP48634 2157 aaKnown RBP15.83■□□□□ 0.12
RAB40C-207ENST00000563109 SRRM5B3KS81 715 aa15.82■□□□□ 0.12
RAB40C-207ENST00000563109 SRMP19623 302 aa15.82■□□□□ 0.12
RAB40C-207ENST00000563109 CD80P33681 288 aa15.82■□□□□ 0.12
RAB40C-207ENST00000563109 KCNJ8Q15842 424 aa15.82■□□□□ 0.12
RAB40C-207ENST00000563109 C22orf42Q6IC83 251 aa15.82■□□□□ 0.12
RAB40C-207ENST00000563109 MUC20Q8N307 709 aaPredicted RBP15.82■□□□□ 0.12
RAB40C-207ENST00000563109 GCSAMQ8N6F7 178 aa15.82■□□□□ 0.12
RAB40C-207ENST00000563109 POC1AQ8NBT0 407 aa15.82■□□□□ 0.12
RAB40C-207ENST00000563109 OR5D18Q8NGL1 313 aa15.82■□□□□ 0.12
RAB40C-207ENST00000563109 SLAMF9Q96A28 289 aa15.82■□□□□ 0.12
RAB40C-207ENST00000563109 YIPF6Q96EC8 236 aa15.82■□□□□ 0.12
RAB40C-207ENST00000563109 CHCHD6Q9BRQ6 235 aa15.82■□□□□ 0.12
RAB40C-207ENST00000563109 OR51E2Q9H255 320 aa15.82■□□□□ 0.12
RAB40C-207ENST00000563109 PPIL3Q9H2H8 161 aaKnown RBP15.82■□□□□ 0.12
RAB40C-207ENST00000563109 SNTG1Q9NSN8 517 aa15.82■□□□□ 0.12
RAB40C-207ENST00000563109 DNAJB11Q9UBS4 358 aa15.82■□□□□ 0.12
RAB40C-207ENST00000563109 LOC100506127A0A0U1RQW1 187 aa15.81■□□□□ 0.12
RAB40C-207ENST00000563109 VWC2LB2RUY7 222 aa15.81■□□□□ 0.12
RAB40C-207ENST00000563109 LGALS8O00214 317 aa15.81■□□□□ 0.12
RAB40C-207ENST00000563109 AKR7A2O43488 359 aa15.81■□□□□ 0.12
RAB40C-207ENST00000563109 IGHV2-70P01814 119 aa15.81■□□□□ 0.12
RAB40C-207ENST00000563109 PGA5P0DJD9 388 aa15.81■□□□□ 0.12
RAB40C-207ENST00000563109 TMEM225BP0DP42 221 aa15.81■□□□□ 0.12
RAB40C-207ENST00000563109 EGR1P18146 543 aa15.81■□□□□ 0.12
RAB40C-207ENST00000563109 GLRA1P23415 457 aa15.81■□□□□ 0.12
RAB40C-207ENST00000563109 FGF9P31371 208 aaPredicted RBP15.81■□□□□ 0.12
RAB40C-207ENST00000563109 MDH2P40926 338 aaKnown RBP15.81■□□□□ 0.12
RAB40C-207ENST00000563109 GMFBP60983 142 aa15.81■□□□□ 0.12
RAB40C-207ENST00000563109 PDZK1IP1Q13113 114 aa15.81■□□□□ 0.12
RAB40C-207ENST00000563109 GLT8D1Q68CQ7 371 aa15.81■□□□□ 0.12
RAB40C-207ENST00000563109 GPR141Q7Z602 305 aa15.81■□□□□ 0.12
RAB40C-207ENST00000563109 CDH26Q8IXH8 852 aa15.81■□□□□ 0.12
RAB40C-207ENST00000563109 Q8IYB0 196 aa15.81■□□□□ 0.12
RAB40C-207ENST00000563109 SPICQ8N5J4 248 aa15.81■□□□□ 0.12
RAB40C-207ENST00000563109 ZSCAN4Q8NAM6 433 aaPredicted RBP15.81■□□□□ 0.12
RAB40C-207ENST00000563109 OR13F1Q8NGS4 319 aa15.81■□□□□ 0.12
RAB40C-207ENST00000563109 TNFAIP8L1Q8WVP5 186 aa15.81■□□□□ 0.12
RAB40C-207ENST00000563109 CEP19Q96LK0 163 aa15.81■□□□□ 0.12
RAB40C-207ENST00000563109 GAL3ST1Q99999 423 aa15.81■□□□□ 0.12
RAB40C-207ENST00000563109 SMURF1Q9HCE7 757 aa15.81■□□□□ 0.12
RAB40C-207ENST00000563109 TXNL4BQ9NX01 149 aaKnown RBP15.81■□□□□ 0.12
RAB40C-207ENST00000563109 RASL12Q9NYN1 266 aa15.81■□□□□ 0.12
RAB40C-207ENST00000563109 TRAV38-1A0A0B4J264 116 aa15.8■□□□□ 0.12
RAB40C-207ENST00000563109 OOEPA6NGQ2 149 aa15.8■□□□□ 0.12
RAB40C-207ENST00000563109 C3orf80F5H4A9 247 aa15.8■□□□□ 0.12
RAB40C-207ENST00000563109 TRAPPC2LH3BP13 241 aa15.8■□□□□ 0.12
RAB40C-207ENST00000563109 PDCD5O14737 125 aa15.8■□□□□ 0.12
RAB40C-207ENST00000563109 SPRY1O43609 319 aaPredicted RBP15.8■□□□□ 0.12
RAB40C-207ENST00000563109 NXPH2O95156 264 aa15.8■□□□□ 0.12
RAB40C-207ENST00000563109 ZNF205O95201 554 aa15.8■□□□□ 0.12
RAB40C-207ENST00000563109 FSTL3O95633 263 aa15.8■□□□□ 0.12
RAB40C-207ENST00000563109 LHBP01229 141 aa15.8■□□□□ 0.12
RAB40C-207ENST00000563109 RBMXP38159 391 aaKnown RBP15.8■□□□□ 0.12
RAB40C-207ENST00000563109 ALDH3B2P48448 385 aa15.8■□□□□ 0.12
RAB40C-207ENST00000563109 ZMYND11Q15326 602 aa15.8■□□□□ 0.12
RAB40C-207ENST00000563109 SMIM21Q3B7S5 101 aa15.8■□□□□ 0.12
RAB40C-207ENST00000563109 TMEM155Q4W5P6 130 aa15.8■□□□□ 0.12
RAB40C-207ENST00000563109 FAM201AQ5SY85 155 aa15.8■□□□□ 0.12
RAB40C-207ENST00000563109 GDPGP1Q6ZNW5 385 aa15.8■□□□□ 0.12
RAB40C-207ENST00000563109 LRRTM1Q86UE6 522 aa15.8■□□□□ 0.12
RAB40C-207ENST00000563109 SAXO1Q8IYX7 474 aa15.8■□□□□ 0.12
RAB40C-207ENST00000563109 OR51F2Q8NH61 342 aa15.8■□□□□ 0.12
RAB40C-207ENST00000563109 TMIGD2Q96BF3 282 aa15.8■□□□□ 0.12
RAB40C-207ENST00000563109 FOXRED1Q96CU9 486 aaPredicted RBP15.8■□□□□ 0.12
RAB40C-207ENST00000563109 S100A13Q99584 98 aa15.8■□□□□ 0.12
RAB40C-207ENST00000563109 NARFLQ9H6Q4 476 aa15.8■□□□□ 0.12
RAB40C-207ENST00000563109 TRAV1-2A0A0B4J238 106 aa15.79■□□□□ 0.12
RAB40C-207ENST00000563109 RNF223E7ERA6 249 aa15.79■□□□□ 0.12
RAB40C-207ENST00000563109 AIREO43918 545 aa15.79■□□□□ 0.12
RAB40C-207ENST00000563109 NOS1APO75052 506 aaPredicted RBP15.79■□□□□ 0.12
RAB40C-207ENST00000563109 TFAP2AP05549 437 aa15.79■□□□□ 0.12
RAB40C-207ENST00000563109 HEXAP06865 529 aa15.79■□□□□ 0.12
RAB40C-207ENST00000563109 ACAA1P09110 424 aaPredicted RBP15.79■□□□□ 0.12
RAB40C-207ENST00000563109 MUC1P15941 1255 aaPredicted RBP15.79■□□□□ 0.12
RAB40C-207ENST00000563109 USF1P22415 310 aaPredicted RBP15.79■□□□□ 0.12
RAB40C-207ENST00000563109 ZP1P60852 638 aa15.79■□□□□ 0.12
RAB40C-207ENST00000563109 MICBQ29980 383 aa15.79■□□□□ 0.12
RAB40C-207ENST00000563109 SFRP4Q6FHJ7 346 aaPredicted RBP15.79■□□□□ 0.12
RAB40C-207ENST00000563109 FIP1L1Q6UN15 594 aaKnown RBP15.79■□□□□ 0.12
RAB40C-207ENST00000563109 C19orf18Q8NEA5 215 aa15.79■□□□□ 0.12
RAB40C-207ENST00000563109 DEFB108BQ8NET1 73 aa15.79■□□□□ 0.12
RAB40C-207ENST00000563109 ZNF488Q96MN9 340 aa15.79■□□□□ 0.12
RAB40C-207ENST00000563109 KCTD7Q96MP8 289 aa15.79■□□□□ 0.12
RAB40C-207ENST00000563109 NRIP2Q9BQI9 281 aa15.79■□□□□ 0.12
RAB40C-207ENST00000563109 UQCC2Q9BRT2 126 aa15.79■□□□□ 0.12
RAB40C-207ENST00000563109 ELL3Q9HB65 397 aaPredicted RBP15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms