RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 OR13G1Q8NGZ3 307 aa8.49□□□□□ -1.05
SMG1-205ENST00000561947 MAFIPQ8WZ33 124 aa8.49□□□□□ -1.05
SMG1-205ENST00000561947 EMG1Q92979 244 aaKnown RBP8.49□□□□□ -1.05
SMG1-205ENST00000561947 IL36GQ9NZH8 169 aa8.49□□□□□ -1.05
SMG1-205ENST00000561947 UBQLN2Q9UHD9 624 aa8.49□□□□□ -1.05
SMG1-205ENST00000561947 HSF4Q9ULV5 492 aa8.49□□□□□ -1.05
SMG1-205ENST00000561947 GPR132Q9UNW8 380 aa8.49□□□□□ -1.05
SMG1-205ENST00000561947 CACNA1HO95180 2353 aa8.49□□□□□ -1.05
SMG1-205ENST00000561947 OTOGLQ3ZCN5 2332 aa8.49□□□□□ -1.05
SMG1-205ENST00000561947 TRAV14DV4A0A0A6YYC5 116 aa8.49□□□□□ -1.05
SMG1-205ENST00000561947 IGKV1-12A0A0C4DH73 117 aa8.49□□□□□ -1.05
SMG1-205ENST00000561947 C5orf49A4QMS7 147 aa8.49□□□□□ -1.05
SMG1-205ENST00000561947 CFDP00746 253 aaPredicted RBP8.49□□□□□ -1.05
SMG1-205ENST00000561947 IGKV1D-12P01611 117 aa8.49□□□□□ -1.05
SMG1-205ENST00000561947 CD79AP11912 226 aa8.49□□□□□ -1.05
SMG1-205ENST00000561947 CCNOP22674 350 aa8.49□□□□□ -1.05
SMG1-205ENST00000561947 VAMP1P23763 118 aa8.49□□□□□ -1.05
SMG1-205ENST00000561947 FPR2P25090 351 aa8.49□□□□□ -1.05
SMG1-205ENST00000561947 ARR3P36575 388 aa8.49□□□□□ -1.05
SMG1-205ENST00000561947 NPY4RP50391 375 aa8.49□□□□□ -1.05
SMG1-205ENST00000561947 SRSF6Q13247 344 aaKnown RBP8.49□□□□□ -1.05
SMG1-205ENST00000561947 TMUB2Q71RG4 321 aa8.49□□□□□ -1.05
SMG1-205ENST00000561947 OR5AP2Q8NGF4 316 aa8.49□□□□□ -1.05
SMG1-205ENST00000561947 SCGB3A2Q96PL1 93 aa8.49□□□□□ -1.05
SMG1-205ENST00000561947 EHFQ9NZC4 300 aa8.49□□□□□ -1.05
SMG1-205ENST00000561947 PRSS50Q9UI38 385 aa8.49□□□□□ -1.05
SMG1-205ENST00000561947 OSGIN2Q9Y236 505 aa8.49□□□□□ -1.05
SMG1-205ENST00000561947 PTPRBP23467 1997 aa8.49□□□□□ -1.05
SMG1-205ENST00000561947 SLC22A20A6NK97 555 aa8.48□□□□□ -1.05
SMG1-205ENST00000561947 CCSO14618 274 aa8.48□□□□□ -1.05
SMG1-205ENST00000561947 NOS1APO75052 506 aaPredicted RBP8.48□□□□□ -1.05
SMG1-205ENST00000561947 DUS4LO95620 317 aaKnown RBP8.48□□□□□ -1.05
SMG1-205ENST00000561947 AGTR1P30556 359 aa8.48□□□□□ -1.05
SMG1-205ENST00000561947 S100A11P31949 105 aa8.48□□□□□ -1.05
SMG1-205ENST00000561947 RAB1AP62820 205 aa8.48□□□□□ -1.05
SMG1-205ENST00000561947 PDZK1IP1Q13113 114 aa8.48□□□□□ -1.05
SMG1-205ENST00000561947 TAF9Q16594 264 aa8.48□□□□□ -1.05
SMG1-205ENST00000561947 CHRFAM7AQ494W8 412 aa8.48□□□□□ -1.05
SMG1-205ENST00000561947 PEG10Q86TG7 708 aaKnown RBP8.48□□□□□ -1.05
SMG1-205ENST00000561947 TMEM185AQ8NFB2 350 aa8.48□□□□□ -1.05
SMG1-205ENST00000561947 CASTOR1Q8WTX7 329 aa8.48□□□□□ -1.05
SMG1-205ENST00000561947 APOBEC3DQ96AK3 386 aaPredicted RBP8.48□□□□□ -1.05
SMG1-205ENST00000561947 REPIN1Q9BWE0 567 aaKnown RBP8.48□□□□□ -1.05
SMG1-205ENST00000561947 PPA2Q9H2U2 334 aa8.48□□□□□ -1.05
SMG1-205ENST00000561947 C5orf66Q9H5L9 145 aa8.48□□□□□ -1.05
SMG1-205ENST00000561947 ZNF701Q9NV72 531 aaPredicted RBP8.48□□□□□ -1.05
SMG1-205ENST00000561947 MAB21L2Q9Y586 359 aa8.48□□□□□ -1.05
SMG1-205ENST00000561947 CSAG2Q9Y5P2 127 aa8.48□□□□□ -1.05
SMG1-205ENST00000561947 TNRC6AQ8NDV7 1962 aaKnown RBP8.48□□□□□ -1.05
SMG1-205ENST00000561947 LINC00862A6NCI5 91 aa8.48□□□□□ -1.05
SMG1-205ENST00000561947 ZNF850A8MQ14 1090 aa8.48□□□□□ -1.05
SMG1-205ENST00000561947 CCL2P13500 99 aa8.48□□□□□ -1.05
SMG1-205ENST00000561947 RPA2P15927 270 aa8.48□□□□□ -1.05
SMG1-205ENST00000561947 PMP22Q01453 160 aa8.48□□□□□ -1.05
SMG1-205ENST00000561947 FGL1Q08830 312 aa8.48□□□□□ -1.05
SMG1-205ENST00000561947 HLXQ14774 488 aaPredicted RBP8.48□□□□□ -1.05
SMG1-205ENST00000561947 AADACL3Q5VUY0 350 aa8.48□□□□□ -1.05
SMG1-205ENST00000561947 RPUSD3Q6P087 351 aaKnown RBP8.48□□□□□ -1.05
SMG1-205ENST00000561947 OVCH2Q7RTZ1 564 aa8.48□□□□□ -1.05
SMG1-205ENST00000561947 OSR2Q8N2R0 312 aa8.48□□□□□ -1.05
SMG1-205ENST00000561947 OR56B2PQ8NGI1 322 aa8.48□□□□□ -1.05
SMG1-205ENST00000561947 TMEM230Q96A57 120 aa8.48□□□□□ -1.05
SMG1-205ENST00000561947 MRPS24Q96EL2 167 aaKnown RBP8.48□□□□□ -1.05
SMG1-205ENST00000561947 HDHD3Q9BSH5 251 aaPredicted RBP8.48□□□□□ -1.05
SMG1-205ENST00000561947 PDCD10Q9BUL8 212 aa8.48□□□□□ -1.05
SMG1-205ENST00000561947 IRF2BPLQ9H1B7 796 aa8.48□□□□□ -1.05
SMG1-205ENST00000561947 C12orf49Q9H741 205 aa8.48□□□□□ -1.05
SMG1-205ENST00000561947 GP6Q9HCN6 339 aa8.48□□□□□ -1.05
SMG1-205ENST00000561947 GPR160Q9UJ42 338 aa8.48□□□□□ -1.05
SMG1-205ENST00000561947 ZNF175Q9Y473 711 aa8.48□□□□□ -1.05
SMG1-205ENST00000561947 TTC28Q96AY4 2481 aa8.48□□□□□ -1.05
SMG1-205ENST00000561947 IGKV1D-8A0A087WSZ0 117 aa8.47□□□□□ -1.05
SMG1-205ENST00000561947 RPS10-NUDT3A0A1W2PQS6 291 aa8.47□□□□□ -1.05
SMG1-205ENST00000561947 OR5H14A6NHG9 310 aa8.47□□□□□ -1.05
SMG1-205ENST00000561947 DBX1A6NMT0 343 aa8.47□□□□□ -1.05
SMG1-205ENST00000561947 SDCBPO00560 298 aaPredicted RBP8.47□□□□□ -1.05
SMG1-205ENST00000561947 SS18L1O75177 396 aaPredicted RBP8.47□□□□□ -1.05
SMG1-205ENST00000561947 CHATP28329 748 aa8.47□□□□□ -1.05
SMG1-205ENST00000561947 CCL11P51671 97 aa8.47□□□□□ -1.05
SMG1-205ENST00000561947 PLP2Q04941 152 aa8.47□□□□□ -1.05
SMG1-205ENST00000561947 MALLQ13021 153 aa8.47□□□□□ -1.05
SMG1-205ENST00000561947 TMEM128Q5BJH2 165 aa8.47□□□□□ -1.05
SMG1-205ENST00000561947 CLLU1Q5K131 121 aa8.47□□□□□ -1.05
SMG1-205ENST00000561947 C3P1Q6ZMU1 363 aa8.47□□□□□ -1.05
SMG1-205ENST00000561947 NAXEQ8NCW5 288 aa8.47□□□□□ -1.05
SMG1-205ENST00000561947 POM121L2Q96KW2 1035 aa8.47□□□□□ -1.05
SMG1-205ENST00000561947 FAAP24Q9BTP7 215 aa8.47□□□□□ -1.05
SMG1-205ENST00000561947 AK3Q9UIJ7 227 aa8.47□□□□□ -1.05
SMG1-205ENST00000561947 MSTNO14793 375 aa8.47□□□□□ -1.05
SMG1-205ENST00000561947 GEMIN2O14893 280 aaKnown RBP8.47□□□□□ -1.05
SMG1-205ENST00000561947 RRP8O43159 456 aaKnown RBP8.47□□□□□ -1.05
SMG1-205ENST00000561947 ZNHIT1O43257 154 aa8.47□□□□□ -1.05
SMG1-205ENST00000561947 RP2O75695 350 aa8.47□□□□□ -1.05
SMG1-205ENST00000561947 IL18BPO95998 194 aa8.47□□□□□ -1.05
SMG1-205ENST00000561947 MPGP29372 298 aa8.47□□□□□ -1.05
SMG1-205ENST00000561947 PIGYQ3MUY2 71 aa8.47□□□□□ -1.05
SMG1-205ENST00000561947 KCTD9Q7L273 389 aa8.47□□□□□ -1.05
SMG1-205ENST00000561947 MRPL21Q7Z2W9 205 aaKnown RBP8.47□□□□□ -1.05
SMG1-205ENST00000561947 DPPA2Q7Z7J5 298 aa8.47□□□□□ -1.05
SMG1-205ENST00000561947 ZSCAN4Q8NAM6 433 aaPredicted RBP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms