RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 SNX5Q9Y5X3 404 aa8.44□□□□□ -1.06
CLK3-205ENST00000561673 V9GYS6 101 aa8.44□□□□□ -1.06
CLK3-205ENST00000561673 A0A1B0GUS0 222 aa8.43□□□□□ -1.06
CLK3-205ENST00000561673 A0A1W2PQ09 198 aa8.43□□□□□ -1.06
CLK3-205ENST00000561673 A0A1W2PQL4 384 aaPredicted RBP8.43□□□□□ -1.06
CLK3-205ENST00000561673 A0A1W2PRD5 423 aa8.43□□□□□ -1.06
CLK3-205ENST00000561673 A0A1W2PRF3 423 aa8.43□□□□□ -1.06
CLK3-205ENST00000561673 A0A1W2PRM7 423 aa8.43□□□□□ -1.06
CLK3-205ENST00000561673 PQLC2LA1A4F0 135 aa8.43□□□□□ -1.06
CLK3-205ENST00000561673 RFPL4AA6NLU0 287 aa8.43□□□□□ -1.06
CLK3-205ENST00000561673 RFPL4AL1F8VTS6 287 aa8.43□□□□□ -1.06
CLK3-205ENST00000561673 M0R1W7 72 aa8.43□□□□□ -1.06
CLK3-205ENST00000561673 DLGAP1O14490 977 aa8.43□□□□□ -1.06
CLK3-205ENST00000561673 NPFFO15130 113 aa8.43□□□□□ -1.06
CLK3-205ENST00000561673 SYNGR1O43759 233 aa8.43□□□□□ -1.06
CLK3-205ENST00000561673 RPP14O95059 124 aaKnown RBP8.43□□□□□ -1.06
CLK3-205ENST00000561673 NDUFA7O95182 113 aa8.43□□□□□ -1.06
CLK3-205ENST00000561673 APOL3O95236 402 aa8.43□□□□□ -1.06
CLK3-205ENST00000561673 KNG1P01042 644 aa8.43□□□□□ -1.06
CLK3-205ENST00000561673 HTR1FP30939 366 aa8.43□□□□□ -1.06
CLK3-205ENST00000561673 HAAOP46952 286 aa8.43□□□□□ -1.06
CLK3-205ENST00000561673 SRSF4Q08170 494 aaKnown RBP8.43□□□□□ -1.06
CLK3-205ENST00000561673 KLRD1Q13241 179 aa8.43□□□□□ -1.06
CLK3-205ENST00000561673 ACP7Q6ZNF0 438 aa8.43□□□□□ -1.06
CLK3-205ENST00000561673 ASRGL1Q7L266 308 aa8.43□□□□□ -1.06
CLK3-205ENST00000561673 ZNF573Q86YE8 665 aa8.43□□□□□ -1.06
CLK3-205ENST00000561673 PNKDQ8N490 385 aa8.43□□□□□ -1.06
CLK3-205ENST00000561673 CD177Q8N6Q3 437 aa8.43□□□□□ -1.06
CLK3-205ENST00000561673 YIPF7Q8N8F6 280 aa8.43□□□□□ -1.06
CLK3-205ENST00000561673 POC1AQ8NBT0 407 aa8.43□□□□□ -1.06
CLK3-205ENST00000561673 OR4F5Q8NH21 305 aa8.43□□□□□ -1.06
CLK3-205ENST00000561673 DYRK2Q92630 601 aa8.43□□□□□ -1.06
CLK3-205ENST00000561673 GABARAPL3Q9BY60 117 aa8.43□□□□□ -1.06
CLK3-205ENST00000561673 RIBC2Q9H4K1 309 aa8.43□□□□□ -1.06
CLK3-205ENST00000561673 METTL8Q9H825 291 aaKnown RBP8.43□□□□□ -1.06
CLK3-205ENST00000561673 BEX1Q9HBH7 125 aa8.43□□□□□ -1.06
CLK3-205ENST00000561673 VWFP04275 2813 aa8.42□□□□□ -1.06
CLK3-205ENST00000561673 METTL15A6NJ78 407 aa8.42□□□□□ -1.06
CLK3-205ENST00000561673 SAC3D1A6NKF1 404 aa8.42□□□□□ -1.06
CLK3-205ENST00000561673 DHRS7CA6NNS2 312 aa8.42□□□□□ -1.06
CLK3-205ENST00000561673 J3QT63 122 aa8.42□□□□□ -1.06
CLK3-205ENST00000561673 GPR137BO60478 399 aa8.42□□□□□ -1.06
CLK3-205ENST00000561673 NOS1APO75052 506 aaPredicted RBP8.42□□□□□ -1.06
CLK3-205ENST00000561673 CIB2O75838 187 aa8.42□□□□□ -1.06
CLK3-205ENST00000561673 KRT8P05787 483 aa8.42□□□□□ -1.06
CLK3-205ENST00000561673 OR2T7P0C7T2 308 aa8.42□□□□□ -1.06
CLK3-205ENST00000561673 PGA5P0DJD9 388 aa8.42□□□□□ -1.06
CLK3-205ENST00000561673 CCL1P22362 96 aa8.42□□□□□ -1.06
CLK3-205ENST00000561673 EEF1B2P24534 225 aaKnown RBP8.42□□□□□ -1.06
CLK3-205ENST00000561673 PRDX2P32119 198 aa8.42□□□□□ -1.06
CLK3-205ENST00000561673 UBE2E1P51965 193 aa8.42□□□□□ -1.06
CLK3-205ENST00000561673 RPL15P61313 204 aaKnown RBP8.42□□□□□ -1.06
CLK3-205ENST00000561673 TAGLNQ01995 201 aaKnown RBP8.42□□□□□ -1.06
CLK3-205ENST00000561673 ODF4Q2M2E3 257 aa8.42□□□□□ -1.06
CLK3-205ENST00000561673 SMIM21Q3B7S5 101 aa8.42□□□□□ -1.06
CLK3-205ENST00000561673 OLFML2AQ68BL7 652 aa8.42□□□□□ -1.06
CLK3-205ENST00000561673 CATSPERDQ86XM0 798 aa8.42□□□□□ -1.06
CLK3-205ENST00000561673 ANGPTL5Q86XS5 388 aa8.42□□□□□ -1.06
CLK3-205ENST00000561673 BATF2Q8N1L9 274 aa8.42□□□□□ -1.06
CLK3-205ENST00000561673 TMEM185AQ8NFB2 350 aa8.42□□□□□ -1.06
CLK3-205ENST00000561673 OR10H4Q8NGA5 316 aa8.42□□□□□ -1.06
CLK3-205ENST00000561673 OR8J1Q8NGP2 316 aa8.42□□□□□ -1.06
CLK3-205ENST00000561673 OR2T27Q8NH04 317 aa8.42□□□□□ -1.06
CLK3-205ENST00000561673 WFDC12Q8WWY7 111 aa8.42□□□□□ -1.06
CLK3-205ENST00000561673 PYDC1Q8WXC3 89 aa8.42□□□□□ -1.06
CLK3-205ENST00000561673 RORBQ92753 470 aa8.42□□□□□ -1.06
CLK3-205ENST00000561673 UBE2FQ969M7 185 aa8.42□□□□□ -1.06
CLK3-205ENST00000561673 EME1Q96AY2 570 aa8.42□□□□□ -1.06
CLK3-205ENST00000561673 RBM4BQ9BQ04 359 aaKnown RBP8.42□□□□□ -1.06
CLK3-205ENST00000561673 NRIP2Q9BQI9 281 aa8.42□□□□□ -1.06
CLK3-205ENST00000561673 OSBPL10Q9BXB5 764 aa8.42□□□□□ -1.06
CLK3-205ENST00000561673 DPAGT1Q9H3H5 408 aa8.42□□□□□ -1.06
CLK3-205ENST00000561673 CAB39Q9Y376 341 aaPredicted RBP8.42□□□□□ -1.06
CLK3-205ENST00000561673 TRBV23-1A0A0A0MS06 115 aa8.41□□□□□ -1.06
CLK3-205ENST00000561673 MEIOCA2RUB1 952 aa8.41□□□□□ -1.06
CLK3-205ENST00000561673 CLPSL1A2RUU4 121 aa8.41□□□□□ -1.06
CLK3-205ENST00000561673 H0YAE9 185 aa8.41□□□□□ -1.06
CLK3-205ENST00000561673 H3BSH0 61 aa8.41□□□□□ -1.06
CLK3-205ENST00000561673 SULT1C4O75897 302 aa8.41□□□□□ -1.06
CLK3-205ENST00000561673 NXPH2O95156 264 aa8.41□□□□□ -1.06
CLK3-205ENST00000561673 FBP1P09467 338 aa8.41□□□□□ -1.06
CLK3-205ENST00000561673 MPZP25189 248 aa8.41□□□□□ -1.06
CLK3-205ENST00000561673 SAA4P35542 130 aa8.41□□□□□ -1.06
CLK3-205ENST00000561673 ATP6V1E1P36543 226 aa8.41□□□□□ -1.06
CLK3-205ENST00000561673 CEBPDP49716 269 aaPredicted RBP8.41□□□□□ -1.06
CLK3-205ENST00000561673 CAPZA1P52907 286 aa8.41□□□□□ -1.06
CLK3-205ENST00000561673 BLMHQ13867 455 aa8.41□□□□□ -1.06
CLK3-205ENST00000561673 UBE2V2Q15819 145 aa8.41□□□□□ -1.06
CLK3-205ENST00000561673 TAF9Q16594 264 aa8.41□□□□□ -1.06
CLK3-205ENST00000561673 NCR3LG1Q68D85 454 aa8.41□□□□□ -1.06
CLK3-205ENST00000561673 HCP5Q6MZN7 132 aa8.41□□□□□ -1.06
CLK3-205ENST00000561673 LIAT1Q6ZQX7 453 aa8.41□□□□□ -1.06
CLK3-205ENST00000561673 CALHM1Q8IU99 346 aa8.41□□□□□ -1.06
CLK3-205ENST00000561673 FAM185AQ8N0U4 392 aa8.41□□□□□ -1.06
CLK3-205ENST00000561673 ZNF561Q8N587 486 aa8.41□□□□□ -1.06
CLK3-205ENST00000561673 C17orf50Q8WW18 174 aa8.41□□□□□ -1.06
CLK3-205ENST00000561673 HES4Q9HCC6 221 aa8.41□□□□□ -1.06
CLK3-205ENST00000561673 C19orf12Q9NSK7 152 aa8.41□□□□□ -1.06
CLK3-205ENST00000561673 ZNRD1Q9P1U0 126 aa8.41□□□□□ -1.06
CLK3-205ENST00000561673 POLDIP2Q9Y2S7 368 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms