RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 NUDT2P50583 147 aa14.84□□□□□ -0.03
TPM1-226ENST00000560959 PSME3P61289 254 aa14.84□□□□□ -0.03
TPM1-226ENST00000560959 ERI1Q8IV48 349 aaKnown RBP14.84□□□□□ -0.03
TPM1-226ENST00000560959 LINC00482Q8N8I6 264 aa14.84□□□□□ -0.03
TPM1-226ENST00000560959 OR2T33Q8NG76 320 aa14.84□□□□□ -0.03
TPM1-226ENST00000560959 OR4X2Q8NGF9 303 aa14.84□□□□□ -0.03
TPM1-226ENST00000560959 AKR1E2Q96JD6 320 aa14.84□□□□□ -0.03
TPM1-226ENST00000560959 AMELYQ99218 206 aa14.84□□□□□ -0.03
TPM1-226ENST00000560959 MCRIP2Q9BUT9 160 aaKnown RBP14.84□□□□□ -0.03
TPM1-226ENST00000560959 TSSK6Q9BXA6 273 aa14.84□□□□□ -0.03
TPM1-226ENST00000560959 NIPAL2Q9H841 368 aa14.84□□□□□ -0.03
TPM1-226ENST00000560959 ZNF728P0DKX0 622 aa14.83□□□□□ -0.04
TPM1-226ENST00000560959 SAMD4BQ5PRF9 694 aaKnown RBP14.83□□□□□ -0.04
TPM1-226ENST00000560959 LCN1P1Q5VSP4 162 aa14.83□□□□□ -0.04
TPM1-226ENST00000560959 HAGHLQ6PII5 290 aaPredicted RBP14.83□□□□□ -0.04
TPM1-226ENST00000560959 ZNF454Q8N9F8 522 aa14.83□□□□□ -0.04
TPM1-226ENST00000560959 FAM81AQ8TBF8 368 aa14.83□□□□□ -0.04
TPM1-226ENST00000560959 BTBD10Q9BSF8 475 aa14.83□□□□□ -0.04
TPM1-226ENST00000560959 SPAG4Q9NPE6 437 aa14.83□□□□□ -0.04
TPM1-226ENST00000560959 TBC1D23Q9NUY8 699 aa14.83□□□□□ -0.04
TPM1-226ENST00000560959 U3KQK5 164 aa14.83□□□□□ -0.04
TPM1-226ENST00000560959 A0A0U1RQV5 110 aa14.82□□□□□ -0.04
TPM1-226ENST00000560959 ACOD1A6NK06 481 aa14.82□□□□□ -0.04
TPM1-226ENST00000560959 GASTP01350 101 aa14.82□□□□□ -0.04
TPM1-226ENST00000560959 LYNP07948 512 aa14.82□□□□□ -0.04
TPM1-226ENST00000560959 PGA5P0DJD9 388 aa14.82□□□□□ -0.04
TPM1-226ENST00000560959 IGHV1-8P0DP01 117 aa14.82□□□□□ -0.04
TPM1-226ENST00000560959 SF3A3Q12874 501 aaKnown RBP eCLIP14.82□□□□□ -0.049e-9■■■■□ 23.4
TPM1-226ENST00000560959 CEP78Q5JTW2 689 aa14.82□□□□□ -0.04
TPM1-226ENST00000560959 OR8B12Q8NGG6 310 aa14.82□□□□□ -0.04
TPM1-226ENST00000560959 OTOSQ8NHW6 89 aa14.82□□□□□ -0.04
TPM1-226ENST00000560959 OR8B4Q96RC9 309 aa14.82□□□□□ -0.04
TPM1-226ENST00000560959 LIN7BQ9HAP6 207 aa14.82□□□□□ -0.04
TPM1-226ENST00000560959 CMC2Q9NRP2 79 aa14.82□□□□□ -0.04
TPM1-226ENST00000560959 RIIAD1A6NNX1 92 aa14.81□□□□□ -0.04
TPM1-226ENST00000560959 K7N7A8 449 aa14.81□□□□□ -0.04
TPM1-226ENST00000560959 CCDC22O60826 627 aa14.81□□□□□ -0.04
TPM1-226ENST00000560959 ZFPL1O95159 310 aa14.81□□□□□ -0.04
TPM1-226ENST00000560959 ZNF3P17036 446 aa14.81□□□□□ -0.04
TPM1-226ENST00000560959 PSMA6P60900 246 aaKnown RBP14.81□□□□□ -0.04
TPM1-226ENST00000560959 SLC34A1Q06495 639 aa14.81□□□□□ -0.04
TPM1-226ENST00000560959 RNF144BQ7Z419 303 aa14.81□□□□□ -0.04
TPM1-226ENST00000560959 OR9Q2Q8NGE9 314 aa14.81□□□□□ -0.04
TPM1-226ENST00000560959 OR4Q3Q8NH05 313 aa14.81□□□□□ -0.04
TPM1-226ENST00000560959 HES4Q9HCC6 221 aa14.81□□□□□ -0.04
TPM1-226ENST00000560959 MAGEL2Q9UJ55 1249 aa14.81□□□□□ -0.04
TPM1-226ENST00000560959 HILPDAQ9Y5L2 63 aa14.81□□□□□ -0.04
TPM1-226ENST00000560959 LYVE1Q9Y5Y7 322 aa14.81□□□□□ -0.04
TPM1-226ENST00000560959 V9GYQ6 96 aa14.81□□□□□ -0.04
TPM1-226ENST00000560959 RIPPLY1Q0D2K3 151 aa14.8□□□□□ -0.04
TPM1-226ENST00000560959 DYNC1I2Q13409 638 aaKnown RBP14.8□□□□□ -0.04
TPM1-226ENST00000560959 IL18R1Q13478 541 aa14.8□□□□□ -0.04
TPM1-226ENST00000560959 KLHL22Q53GT1 634 aa14.8□□□□□ -0.04
TPM1-226ENST00000560959 UNQ9370/PRO34162Q6UXP9 181 aa14.8□□□□□ -0.04
TPM1-226ENST00000560959 MOB3CQ70IA8 216 aa14.8□□□□□ -0.04
TPM1-226ENST00000560959 ZNF573Q86YE8 665 aa14.8□□□□□ -0.04
TPM1-226ENST00000560959 MRPL41Q8IXM3 137 aaKnown RBP14.8□□□□□ -0.04
TPM1-226ENST00000560959 OR51D1Q8NGF3 324 aa14.8□□□□□ -0.04
TPM1-226ENST00000560959 THEM6Q8WUY1 208 aa14.8□□□□□ -0.04
TPM1-226ENST00000560959 NRIP2Q9BQI9 281 aa14.8□□□□□ -0.04
TPM1-226ENST00000560959 CHID1Q9BWS9 393 aa14.8□□□□□ -0.04
TPM1-226ENST00000560959 POLDIP2Q9Y2S7 368 aa14.8□□□□□ -0.04
TPM1-226ENST00000560959 J3QT63 122 aa14.79□□□□□ -0.04
TPM1-226ENST00000560959 TNFRSF11BO00300 401 aa14.79□□□□□ -0.04
TPM1-226ENST00000560959 LMO1P25800 156 aa14.79□□□□□ -0.04
TPM1-226ENST00000560959 MEF2CQ06413 473 aaPredicted RBP14.79□□□□□ -0.04
TPM1-226ENST00000560959 ZBTB49Q6ZSB9 765 aa14.79□□□□□ -0.04
TPM1-226ENST00000560959 NXPH2O95156 264 aa14.78□□□□□ -0.04
TPM1-226ENST00000560959 PIPP12273 146 aaPredicted RBP14.78□□□□□ -0.04
TPM1-226ENST00000560959 SLC6A1P30531 599 aa14.78□□□□□ -0.04
TPM1-226ENST00000560959 HAAOP46952 286 aa14.78□□□□□ -0.04
TPM1-226ENST00000560959 CEBPDP49716 269 aaPredicted RBP14.78□□□□□ -0.04
TPM1-226ENST00000560959 ACTA2P62736 377 aa14.78□□□□□ -0.04
TPM1-226ENST00000560959 ACTG2P63267 376 aa14.78□□□□□ -0.04
TPM1-226ENST00000560959 ACTC1P68032 377 aa14.78□□□□□ -0.04
TPM1-226ENST00000560959 ACTA1P68133 377 aa14.78□□□□□ -0.04
TPM1-226ENST00000560959 TRPM8Q7Z2W7 1104 aa14.78□□□□□ -0.04
TPM1-226ENST00000560959 CAPSLQ8WWF8 208 aa14.78□□□□□ -0.04
TPM1-226ENST00000560959 CMTM5Q96DZ9 223 aa14.78□□□□□ -0.04
TPM1-226ENST00000560959 NSMCE2Q96MF7 247 aa14.78□□□□□ -0.04
TPM1-226ENST00000560959 ZNF488Q96MN9 340 aa14.78□□□□□ -0.04
TPM1-226ENST00000560959 ZNF714Q96N38 554 aa14.78□□□□□ -0.04
TPM1-226ENST00000560959 DGCR6LQ9BY27 220 aa14.78□□□□□ -0.04
TPM1-226ENST00000560959 IGHV2-26A0A0B4J1V2 119 aa14.77□□□□□ -0.05
TPM1-226ENST00000560959 GSC2O15499 205 aa14.77□□□□□ -0.05
TPM1-226ENST00000560959 RAMP3O60896 148 aa14.77□□□□□ -0.05
TPM1-226ENST00000560959 CCNB2O95067 398 aa14.77□□□□□ -0.05
TPM1-226ENST00000560959 NRASP01111 189 aa14.77□□□□□ -0.05
TPM1-226ENST00000560959 IGLV3-1P01715 115 aa14.77□□□□□ -0.05
TPM1-226ENST00000560959 LPLP06858 475 aa14.77□□□□□ -0.05
TPM1-226ENST00000560959 CHRM2P08172 466 aa14.77□□□□□ -0.05
TPM1-226ENST00000560959 HSD17B1P14061 328 aa14.77□□□□□ -0.05
TPM1-226ENST00000560959 JUNBP17275 347 aaPredicted RBP14.77□□□□□ -0.05
TPM1-226ENST00000560959 MPZP25189 248 aa14.77□□□□□ -0.05
TPM1-226ENST00000560959 BRS3P32247 399 aa14.77□□□□□ -0.05
TPM1-226ENST00000560959 THBS3P49746 956 aa14.77□□□□□ -0.05
TPM1-226ENST00000560959 ERVK11-1P61568 191 aa14.77□□□□□ -0.05
TPM1-226ENST00000560959 DGCR2P98153 550 aa14.77□□□□□ -0.05
TPM1-226ENST00000560959 PLCXD3Q63HM9 321 aa14.77□□□□□ -0.05
TPM1-226ENST00000560959 DEGS2Q6QHC5 323 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms