RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 SLC34A1Q06495 639 aa14.3□□□□□ -0.12
TSPAN3-208ENST00000560514 TRIM25Q14258 630 aaKnown RBP14.3□□□□□ -0.12
TSPAN3-208ENST00000560514 MICAQ29983 383 aa14.3□□□□□ -0.12
TSPAN3-208ENST00000560514 C11orf42Q8N5U0 333 aa14.3□□□□□ -0.12
TSPAN3-208ENST00000560514 OR51D1Q8NGF3 324 aa14.3□□□□□ -0.12
TSPAN3-208ENST00000560514 OR6K6Q8NGW6 343 aa14.3□□□□□ -0.12
TSPAN3-208ENST00000560514 ZNRF4Q8WWF5 429 aa14.3□□□□□ -0.12
TSPAN3-208ENST00000560514 AKR1E2Q96JD6 320 aa14.3□□□□□ -0.12
TSPAN3-208ENST00000560514 DGCR6LQ9BY27 220 aa14.3□□□□□ -0.12
TSPAN3-208ENST00000560514 RFPL4AA6NLU0 287 aa14.29□□□□□ -0.12
TSPAN3-208ENST00000560514 RFPL4AL1F8VTS6 287 aa14.29□□□□□ -0.12
TSPAN3-208ENST00000560514 DCTDP32321 178 aa14.29□□□□□ -0.12
TSPAN3-208ENST00000560514 DYNLT3P51808 116 aa14.29□□□□□ -0.12
TSPAN3-208ENST00000560514 GNG3P63215 75 aa14.29□□□□□ -0.12
TSPAN3-208ENST00000560514 SMIM21Q3B7S5 101 aa14.29□□□□□ -0.12
TSPAN3-208ENST00000560514 FAM98BQ52LJ0 330 aaKnown RBP14.29□□□□□ -0.12
TSPAN3-208ENST00000560514 TCTEX1D4Q5JR98 221 aa14.29□□□□□ -0.12
TSPAN3-208ENST00000560514 LCN8Q6JVE9 175 aa14.29□□□□□ -0.12
TSPAN3-208ENST00000560514 CD300LDQ6UXZ3 194 aa14.29□□□□□ -0.12
TSPAN3-208ENST00000560514 DHFR2Q86XF0 187 aa14.29□□□□□ -0.12
TSPAN3-208ENST00000560514 CALHM1Q8IU99 346 aa14.29□□□□□ -0.12
TSPAN3-208ENST00000560514 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.29□□□□□ -0.12
TSPAN3-208ENST00000560514 LINC00482Q8N8I6 264 aa14.29□□□□□ -0.12
TSPAN3-208ENST00000560514 SLC37A3Q8NCC5 494 aa14.29□□□□□ -0.12
TSPAN3-208ENST00000560514 OR9Q2Q8NGE9 314 aa14.29□□□□□ -0.12
TSPAN3-208ENST00000560514 FAM81AQ8TBF8 368 aa14.29□□□□□ -0.12
TSPAN3-208ENST00000560514 TSSK6Q9BXA6 273 aa14.29□□□□□ -0.12
TSPAN3-208ENST00000560514 NMNAT2Q9BZQ4 307 aa14.29□□□□□ -0.12
TSPAN3-208ENST00000560514 RASL12Q9NYN1 266 aa14.29□□□□□ -0.12
TSPAN3-208ENST00000560514 HILPDAQ9Y5L2 63 aa14.29□□□□□ -0.12
TSPAN3-208ENST00000560514 TCRBV5S2A0A599 114 aa14.28□□□□□ -0.12
TSPAN3-208ENST00000560514 ZNF732B4DXR9 585 aa14.28□□□□□ -0.12
TSPAN3-208ENST00000560514 GYPBP06028 91 aa14.28□□□□□ -0.12
TSPAN3-208ENST00000560514 H2BFMP0C1H6 154 aa14.28□□□□□ -0.12
TSPAN3-208ENST00000560514 CCDC159P0C7I6 412 aa14.28□□□□□ -0.12
TSPAN3-208ENST00000560514 HOXB6P17509 224 aaKnown RBP14.28□□□□□ -0.12
TSPAN3-208ENST00000560514 ZNF273Q14593 569 aa14.28□□□□□ -0.12
TSPAN3-208ENST00000560514 CYP2R1Q6VVX0 501 aa14.28□□□□□ -0.12
TSPAN3-208ENST00000560514 PRSS45Q7RTY3 260 aa14.28□□□□□ -0.12
TSPAN3-208ENST00000560514 OR2T33Q8NG76 320 aa14.28□□□□□ -0.12
TSPAN3-208ENST00000560514 OR6N2Q8NGY6 317 aa14.28□□□□□ -0.12
TSPAN3-208ENST00000560514 HPSE2Q8WWQ2 592 aa14.28□□□□□ -0.12
TSPAN3-208ENST00000560514 ZNF649Q9BS31 505 aa14.28□□□□□ -0.12
TSPAN3-208ENST00000560514 ZNF319Q9P2F9 582 aa14.28□□□□□ -0.12
TSPAN3-208ENST00000560514 ODF3BA8MYP8 253 aa14.27□□□□□ -0.13
TSPAN3-208ENST00000560514 MTRF1O75570 445 aaKnown RBP14.27□□□□□ -0.13
TSPAN3-208ENST00000560514 IFNGP01579 166 aa14.27□□□□□ -0.13
TSPAN3-208ENST00000560514 PIPP12273 146 aaPredicted RBP14.27□□□□□ -0.13
TSPAN3-208ENST00000560514 ACKR3P25106 362 aa14.27□□□□□ -0.13
TSPAN3-208ENST00000560514 PRDX2P32119 198 aa14.27□□□□□ -0.13
TSPAN3-208ENST00000560514 DGCR2P98153 550 aa14.27□□□□□ -0.13
TSPAN3-208ENST00000560514 ZNF626Q68DY1 528 aa14.27□□□□□ -0.13
TSPAN3-208ENST00000560514 OR2T5Q6IEZ7 315 aa14.27□□□□□ -0.13
TSPAN3-208ENST00000560514 ACP7Q6ZNF0 438 aa14.27□□□□□ -0.13
TSPAN3-208ENST00000560514 C16orf82Q7Z2V1 217 aa14.27□□□□□ -0.13
TSPAN3-208ENST00000560514 CD177Q8N6Q3 437 aa14.27□□□□□ -0.13
TSPAN3-208ENST00000560514 AQP11Q8NBQ7 271 aa14.27□□□□□ -0.13
TSPAN3-208ENST00000560514 OR8D4Q8NGM9 314 aa14.27□□□□□ -0.13
TSPAN3-208ENST00000560514 OR2T29Q8NH02 315 aa14.27□□□□□ -0.13
TSPAN3-208ENST00000560514 NDNFQ8TB73 568 aa14.27□□□□□ -0.13
TSPAN3-208ENST00000560514 RNF133Q8WVZ7 376 aa14.27□□□□□ -0.13
TSPAN3-208ENST00000560514 FGF23Q9GZV9 251 aaPredicted RBP14.27□□□□□ -0.13
TSPAN3-208ENST00000560514 OR51I2Q9H344 312 aa14.27□□□□□ -0.13
TSPAN3-208ENST00000560514 REEP1Q9H902 201 aa14.27□□□□□ -0.13
TSPAN3-208ENST00000560514 C17orf98A8MV24 154 aa14.26□□□□□ -0.13
TSPAN3-208ENST00000560514 ZFPL1O95159 310 aa14.26□□□□□ -0.13
TSPAN3-208ENST00000560514 ATP6V1B2P21281 511 aa14.26□□□□□ -0.13
TSPAN3-208ENST00000560514 CALB2P22676 271 aa14.26□□□□□ -0.13
TSPAN3-208ENST00000560514 GYS2P54840 703 aa14.26□□□□□ -0.13
TSPAN3-208ENST00000560514 CEP78Q5JTW2 689 aa14.26□□□□□ -0.13
TSPAN3-208ENST00000560514 HAGHLQ6PII5 290 aaPredicted RBP14.26□□□□□ -0.13
TSPAN3-208ENST00000560514 ERI1Q8IV48 349 aaKnown RBP14.26□□□□□ -0.13
TSPAN3-208ENST00000560514 MRPL41Q8IXM3 137 aaKnown RBP14.26□□□□□ -0.13
TSPAN3-208ENST00000560514 OR11H6Q8NGC7 330 aa14.26□□□□□ -0.13
TSPAN3-208ENST00000560514 ABHD6Q9BV23 337 aa14.26□□□□□ -0.13
TSPAN3-208ENST00000560514 TBC1D23Q9NUY8 699 aa14.26□□□□□ -0.13
TSPAN3-208ENST00000560514 SAMHD1Q9Y3Z3 626 aaKnown RBP14.26□□□□□ -0.13
TSPAN3-208ENST00000560514 LPLP06858 475 aa14.25□□□□□ -0.13
TSPAN3-208ENST00000560514 SPI1P17947 270 aa14.25□□□□□ -0.13
TSPAN3-208ENST00000560514 MS4A2Q01362 244 aa14.25□□□□□ -0.13
TSPAN3-208ENST00000560514 IL18R1Q13478 541 aa14.25□□□□□ -0.13
TSPAN3-208ENST00000560514 CRMP1Q14194 572 aa14.25□□□□□ -0.13
TSPAN3-208ENST00000560514 CEACAM21Q3KPI0 293 aa14.25□□□□□ -0.13
TSPAN3-208ENST00000560514 DMRTC1Q5HYR2 192 aa14.25□□□□□ -0.13
TSPAN3-208ENST00000560514 MINOS1Q5TGZ0 78 aa14.25□□□□□ -0.13
TSPAN3-208ENST00000560514 SHFQ7M4L6 423 aa14.25□□□□□ -0.13
TSPAN3-208ENST00000560514 AQP3Q92482 292 aa14.25□□□□□ -0.13
TSPAN3-208ENST00000560514 STMN2Q93045 179 aa14.25□□□□□ -0.13
TSPAN3-208ENST00000560514 INTS14Q96SY0 518 aa14.25□□□□□ -0.13
TSPAN3-208ENST00000560514 CMC2Q9NRP2 79 aa14.25□□□□□ -0.13
TSPAN3-208ENST00000560514 MINOS1-NBL1R4GNA1 71 aa14.25□□□□□ -0.13
TSPAN3-208ENST00000560514 ARRDC5A6NEK1 342 aa14.24□□□□□ -0.13
TSPAN3-208ENST00000560514 OR5B21A6NL26 309 aa14.24□□□□□ -0.13
TSPAN3-208ENST00000560514 RIIAD1A6NNX1 92 aa14.24□□□□□ -0.13
TSPAN3-208ENST00000560514 RAMP3O60896 148 aa14.24□□□□□ -0.13
TSPAN3-208ENST00000560514 RBP4P02753 201 aa14.24□□□□□ -0.13
TSPAN3-208ENST00000560514 TK1P04183 234 aa14.24□□□□□ -0.13
TSPAN3-208ENST00000560514 ZNF728P0DKX0 622 aa14.24□□□□□ -0.13
TSPAN3-208ENST00000560514 RAP2AP10114 183 aa14.24□□□□□ -0.13
TSPAN3-208ENST00000560514 ZNF3P17036 446 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms