RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 UQCC2Q9BRT2 126 aa12.01□□□□□ -0.49
TRAF3-208ENST00000560371 SLC38A6Q8IZM9 456 aa12□□□□□ -0.49
TRAF3-208ENST00000560371 OR4Q3Q8NH05 313 aa12□□□□□ -0.49
TRAF3-208ENST00000560371 C12orf10Q9HB07 376 aa12□□□□□ -0.49
TRAF3-208ENST00000560371 OR6C68A6NDL8 312 aa12□□□□□ -0.49
TRAF3-208ENST00000560371 TAAR5O14804 337 aa12□□□□□ -0.49
TRAF3-208ENST00000560371 ZNF141Q15928 474 aa12□□□□□ -0.49
TRAF3-208ENST00000560371 DEGS2Q6QHC5 323 aa12□□□□□ -0.49
TRAF3-208ENST00000560371 BHLHA15Q7RTS1 189 aaPredicted RBP12□□□□□ -0.49
TRAF3-208ENST00000560371 AKR1E2Q96JD6 320 aa12□□□□□ -0.49
TRAF3-208ENST00000560371 TMEM56Q96MV1 263 aa12□□□□□ -0.49
TRAF3-208ENST00000560371 UCK1Q9HA47 277 aa12□□□□□ -0.49
TRAF3-208ENST00000560371 ZNF331Q9NQX6 463 aaPredicted RBP12□□□□□ -0.49
TRAF3-208ENST00000560371 H3BMH7 237 aa12□□□□□ -0.49
TRAF3-208ENST00000560371 TMPRSS2O15393 492 aa12□□□□□ -0.49
TRAF3-208ENST00000560371 TXNDC12O95881 172 aa12□□□□□ -0.49
TRAF3-208ENST00000560371 ORAI1Q96D31 301 aa12□□□□□ -0.49
TRAF3-208ENST00000560371 ACY3Q96HD9 319 aa12□□□□□ -0.49
TRAF3-208ENST00000560371 PNLIPP16233 465 aa12□□□□□ -0.49
TRAF3-208ENST00000560371 PTGFRP43088 359 aa12□□□□□ -0.49
TRAF3-208ENST00000560371 FAAP20Q6NZ36 180 aa12□□□□□ -0.49
TRAF3-208ENST00000560371 COX7A2P2O60397 106 aa12□□□□□ -0.49
TRAF3-208ENST00000560371 TMEM127O75204 238 aa12□□□□□ -0.49
TRAF3-208ENST00000560371 WNT3P56703 355 aa12□□□□□ -0.49
TRAF3-208ENST00000560371 EXOSC2Q13868 293 aaKnown RBP12□□□□□ -0.49
TRAF3-208ENST00000560371 OR10V1Q8NGI7 309 aa12□□□□□ -0.49
TRAF3-208ENST00000560371 GAL3ST2Q9H3Q3 398 aa12□□□□□ -0.49
TRAF3-208ENST00000560371 hADV38S2A0JD32 116 aa12□□□□□ -0.49
TRAF3-208ENST00000560371 CCL21O00585 134 aa12□□□□□ -0.49
TRAF3-208ENST00000560371 SPINT1O43278 529 aa12□□□□□ -0.49
TRAF3-208ENST00000560371 CEACAM3P40198 252 aa12□□□□□ -0.49
TRAF3-208ENST00000560371 CEACAM6P40199 344 aa12□□□□□ -0.49
TRAF3-208ENST00000560371 XKRY2A2RUG3 117 aa11.99□□□□□ -0.49
TRAF3-208ENST00000560371 SPRED2Q7Z698 418 aa11.99□□□□□ -0.49
TRAF3-208ENST00000560371 RFESDQ8TAC1 157 aa11.99□□□□□ -0.49
TRAF3-208ENST00000560371 RAB19A4D1S5 217 aa11.99□□□□□ -0.49
TRAF3-208ENST00000560371 ACOT7LQ6ZUV0 252 aa11.99□□□□□ -0.49
TRAF3-208ENST00000560371 OR6X1Q8NH79 312 aa11.99□□□□□ -0.49
TRAF3-208ENST00000560371 WNK3Q9BYP7 1800 aa11.99□□□□□ -0.49
TRAF3-208ENST00000560371 BTN1A1Q13410 526 aa11.99□□□□□ -0.49
TRAF3-208ENST00000560371 AMMECR1Q9Y4X0 333 aaPredicted RBP11.99□□□□□ -0.49
TRAF3-208ENST00000560371 A0A1W2PQF6 199 aa11.99□□□□□ -0.49
TRAF3-208ENST00000560371 ZNF785A8K8V0 405 aa11.99□□□□□ -0.49
TRAF3-208ENST00000560371 GIPP09681 153 aaPredicted RBP11.99□□□□□ -0.49
TRAF3-208ENST00000560371 APH1BQ8WW43 257 aa11.99□□□□□ -0.49
TRAF3-208ENST00000560371 MAGT1Q9H0U3 335 aa11.99□□□□□ -0.49
TRAF3-208ENST00000560371 TRAPPC4Q9Y296 219 aa11.99□□□□□ -0.49
TRAF3-208ENST00000560371 TRAV38-1A0A0B4J264 116 aa11.99□□□□□ -0.49
TRAF3-208ENST00000560371 NUDT19A8MXV4 375 aa11.99□□□□□ -0.49
TRAF3-208ENST00000560371 SSBP1Q04837 148 aaKnown RBP11.99□□□□□ -0.49
TRAF3-208ENST00000560371 PMS2CLQ68D20 193 aa11.99□□□□□ -0.49
TRAF3-208ENST00000560371 MFSD4AQ8N468 514 aa11.99□□□□□ -0.49
TRAF3-208ENST00000560371 UBALD1Q8TB05 177 aa11.99□□□□□ -0.49
TRAF3-208ENST00000560371 OIT3Q8WWZ8 545 aa11.99□□□□□ -0.49
TRAF3-208ENST00000560371 ADAM20O43506 726 aa11.99□□□□□ -0.49
TRAF3-208ENST00000560371 OR4E1P0C645 316 aa11.99□□□□□ -0.49
TRAF3-208ENST00000560371 METTL15P1P0C7V9 234 aa11.99□□□□□ -0.49
TRAF3-208ENST00000560371 TIGITQ495A1 244 aa11.99□□□□□ -0.49
TRAF3-208ENST00000560371 TMUB2Q71RG4 321 aa11.99□□□□□ -0.49
TRAF3-208ENST00000560371 SAP30LQ9HAJ7 183 aa11.99□□□□□ -0.49
TRAF3-208ENST00000560371 IL36GQ9NZH8 169 aa11.99□□□□□ -0.49
TRAF3-208ENST00000560371 PLEKHB1Q9UF11 243 aaPredicted RBP11.99□□□□□ -0.49
TRAF3-208ENST00000560371 AMDHD2Q9Y303 409 aa11.99□□□□□ -0.49
TRAF3-208ENST00000560371 OR2F2O95006 317 aa11.98□□□□□ -0.49
TRAF3-208ENST00000560371 EML2O95834 649 aa11.98□□□□□ -0.49
TRAF3-208ENST00000560371 OR13C7P0DN81 318 aa11.98□□□□□ -0.49
TRAF3-208ENST00000560371 SLC25A6P12236 298 aa11.98□□□□□ -0.49
TRAF3-208ENST00000560371 OR2F1Q13607 317 aa11.98□□□□□ -0.49
TRAF3-208ENST00000560371 PDCD1Q15116 288 aa11.98□□□□□ -0.49
TRAF3-208ENST00000560371 IGFBP7Q16270 282 aa11.98□□□□□ -0.49
TRAF3-208ENST00000560371 LCN15Q6UWW0 184 aa11.98□□□□□ -0.49
TRAF3-208ENST00000560371 PCNPQ8WW12 178 aaKnown RBP11.98□□□□□ -0.49
TRAF3-208ENST00000560371 LHX4Q969G2 390 aa11.98□□□□□ -0.49
TRAF3-208ENST00000560371 MARC2Q969Z3 335 aa11.98□□□□□ -0.49
TRAF3-208ENST00000560371 CHST6Q9GZX3 395 aa11.98□□□□□ -0.49
TRAF3-208ENST00000560371 CLCF1Q9UBD9 225 aa11.98□□□□□ -0.49
TRAF3-208ENST00000560371 SMIM17P0DL12 118 aa11.98□□□□□ -0.49
TRAF3-208ENST00000560371 RAB5CP51148 216 aa11.98□□□□□ -0.49
TRAF3-208ENST00000560371 WDR38Q5JTN6 314 aa11.98□□□□□ -0.49
TRAF3-208ENST00000560371 OR4F5Q8NH21 305 aa11.98□□□□□ -0.49
TRAF3-208ENST00000560371 CMBLQ96DG6 245 aa11.98□□□□□ -0.49
TRAF3-208ENST00000560371 MOGAT1Q96PD6 335 aa11.98□□□□□ -0.49
TRAF3-208ENST00000560371 OR4F4Q96R69 305 aa11.98□□□□□ -0.49
TRAF3-208ENST00000560371 OR6C3Q9NZP0 311 aa11.98□□□□□ -0.49
TRAF3-208ENST00000560371 SCN8AQ9UQD0 1980 aa11.98□□□□□ -0.49
TRAF3-208ENST00000560371 MEX3AA1L020 520 aaKnown RBP11.98□□□□□ -0.49
TRAF3-208ENST00000560371 OR5B21A6NL26 309 aa11.98□□□□□ -0.49
TRAF3-208ENST00000560371 GPR31O00270 319 aa11.98□□□□□ -0.49
TRAF3-208ENST00000560371 ZNF354AO60765 605 aaPredicted RBP11.98□□□□□ -0.49
TRAF3-208ENST00000560371 RPL12P30050 165 aaKnown RBP11.98□□□□□ -0.49
TRAF3-208ENST00000560371 PHYHD1Q5SRE7 291 aa11.98□□□□□ -0.49
TRAF3-208ENST00000560371 OR5B3Q8NH48 314 aa11.98□□□□□ -0.49
TRAF3-208ENST00000560371 PATE4P0C8F1 98 aa11.98□□□□□ -0.49
TRAF3-208ENST00000560371 OR5I1Q13606 314 aa11.98□□□□□ -0.49
TRAF3-208ENST00000560371 GAB4Q2WGN9 574 aa11.98□□□□□ -0.49
TRAF3-208ENST00000560371 MRGPREQ86SM8 312 aa11.98□□□□□ -0.49
TRAF3-208ENST00000560371 URGCP-MRPS24S4R325 110 aa11.98□□□□□ -0.49
TRAF3-208ENST00000560371 COX5AP20674 150 aa11.98□□□□□ -0.49
TRAF3-208ENST00000560371 COX7A1P24310 79 aa11.98□□□□□ -0.49
TRAF3-208ENST00000560371 P2RX3P56373 397 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms