RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 MEX3BQ6ZN04 569 aaKnown RBP10.35□□□□□ -0.75
HERC1-205ENST00000559886 BIVMQ86UB2 503 aa10.35□□□□□ -0.75
HERC1-205ENST00000559886 TMEM200AQ86VY9 491 aa10.35□□□□□ -0.75
HERC1-205ENST00000559886 CLEC18CQ8NCF0 446 aa10.35□□□□□ -0.75
HERC1-205ENST00000559886 TMEM104Q8NE00 496 aa10.35□□□□□ -0.75
HERC1-205ENST00000559886 OR4M1Q8NGD0 313 aa10.35□□□□□ -0.75
HERC1-205ENST00000559886 OR51F2Q8NH61 342 aa10.35□□□□□ -0.75
HERC1-205ENST00000559886 S100A16Q96FQ6 103 aaKnown RBP10.35□□□□□ -0.75
HERC1-205ENST00000559886 DHRS9Q9BPW9 319 aa10.35□□□□□ -0.75
HERC1-205ENST00000559886 PKIBQ9C010 78 aa10.35□□□□□ -0.75
HERC1-205ENST00000559886 CST11Q9H112 138 aa10.35□□□□□ -0.75
HERC1-205ENST00000559886 METTL9Q9H1A3 318 aa10.35□□□□□ -0.75
HERC1-205ENST00000559886 IL36GQ9NZH8 169 aa10.35□□□□□ -0.75
HERC1-205ENST00000559886 PLA2G2AP14555 144 aa10.35□□□□□ -0.75
HERC1-205ENST00000559886 ZNF81P51508 661 aa10.35□□□□□ -0.75
HERC1-205ENST00000559886 IL24Q13007 206 aa10.35□□□□□ -0.75
HERC1-205ENST00000559886 GPR176Q14439 515 aa10.35□□□□□ -0.75
HERC1-205ENST00000559886 RSU1Q15404 277 aa10.35□□□□□ -0.75
HERC1-205ENST00000559886 CDH24Q86UP0 819 aa10.35□□□□□ -0.75
HERC1-205ENST00000559886 MKXQ8IYA7 352 aa10.35□□□□□ -0.75
HERC1-205ENST00000559886 FAM46BQ96A09 425 aa10.35□□□□□ -0.75
HERC1-205ENST00000559886 ELL3Q9HB65 397 aaPredicted RBP10.35□□□□□ -0.75
HERC1-205ENST00000559886 ZDHHC8Q9ULC8 765 aa10.35□□□□□ -0.75
HERC1-205ENST00000559886 CACNA1DQ01668 2161 aa10.35□□□□□ -0.75
HERC1-205ENST00000559886 A0A1W2PP11 408 aa10.34□□□□□ -0.75
HERC1-205ENST00000559886 J3QT63 122 aa10.34□□□□□ -0.75
HERC1-205ENST00000559886 CDC14BO60729 498 aa10.34□□□□□ -0.75
HERC1-205ENST00000559886 ZNF780AO75290 641 aaPredicted RBP10.34□□□□□ -0.75
HERC1-205ENST00000559886 CTAG2O75638 210 aa10.34□□□□□ -0.75
HERC1-205ENST00000559886 PTBP3O95758 552 aaKnown RBP10.34□□□□□ -0.75
HERC1-205ENST00000559886 CD200P41217 278 aa10.34□□□□□ -0.75
HERC1-205ENST00000559886 FAM131AQ6UXB0 335 aa10.34□□□□□ -0.75
HERC1-205ENST00000559886 SCCPDHQ8NBX0 429 aa10.34□□□□□ -0.75
HERC1-205ENST00000559886 OR10K1Q8NGX5 313 aa10.34□□□□□ -0.75
HERC1-205ENST00000559886 AQP3Q92482 292 aa10.34□□□□□ -0.75
HERC1-205ENST00000559886 ELMOD3Q96FG2 381 aa10.34□□□□□ -0.75
HERC1-205ENST00000559886 TLNRD1Q9H1K6 362 aa10.34□□□□□ -0.75
HERC1-205ENST00000559886 HRNRQ86YZ3 2850 aaPredicted RBP10.34□□□□□ -0.75
HERC1-205ENST00000559886 B9A039 149 aa10.34□□□□□ -0.75
HERC1-205ENST00000559886 SYNGR1O43759 233 aa10.34□□□□□ -0.75
HERC1-205ENST00000559886 CRTAPO75718 401 aaPredicted RBP10.34□□□□□ -0.75
HERC1-205ENST00000559886 CYB5AP00167 134 aa10.34□□□□□ -0.75
HERC1-205ENST00000559886 GRPP07492 148 aa10.34□□□□□ -0.75
HERC1-205ENST00000559886 ADH4P08319 380 aa10.34□□□□□ -0.75
HERC1-205ENST00000559886 SERPINA2P20848 420 aa10.34□□□□□ -0.75
HERC1-205ENST00000559886 PTBP1P26599 531 aaKnown RBP eCLIP10.34□□□□□ -0.754e-8■■■■■ 27.3
HERC1-205ENST00000559886 ZNF79Q15937 498 aa10.34□□□□□ -0.75
HERC1-205ENST00000559886 MST1LQ2TV78 715 aa10.34□□□□□ -0.75
HERC1-205ENST00000559886 CELF2-AS1Q8N7Q2 184 aa10.34□□□□□ -0.75
HERC1-205ENST00000559886 Q8NFD4 153 aa10.34□□□□□ -0.75
HERC1-205ENST00000559886 TMEM59Q9BXS4 323 aa10.34□□□□□ -0.75
HERC1-205ENST00000559886 ATG5Q9H1Y0 275 aa10.34□□□□□ -0.75
HERC1-205ENST00000559886 BANF2Q9H503 90 aa10.34□□□□□ -0.75
HERC1-205ENST00000559886 MTCH1Q9NZJ7 389 aa10.34□□□□□ -0.75
HERC1-205ENST00000559886 LRRK2Q5S007 2527 aa10.34□□□□□ -0.75
HERC1-205ENST00000559886 METTL21EPA6NDL7 271 aa10.33□□□□□ -0.76
HERC1-205ENST00000559886 PRSS44E7EML9 344 aa10.33□□□□□ -0.76
HERC1-205ENST00000559886 M0R233 179 aa10.33□□□□□ -0.76
HERC1-205ENST00000559886 SPRY3O43610 288 aa10.33□□□□□ -0.76
HERC1-205ENST00000559886 KDM4BO94953 1096 aa10.33□□□□□ -0.76
HERC1-205ENST00000559886 MPIG6BO95866 241 aa10.33□□□□□ -0.76
HERC1-205ENST00000559886 IGHV1-46P01743 117 aa10.33□□□□□ -0.76
HERC1-205ENST00000559886 CSTBP04080 98 aaKnown RBP10.33□□□□□ -0.76
HERC1-205ENST00000559886 SFTPBP07988 381 aa10.33□□□□□ -0.76
HERC1-205ENST00000559886 MGMTP16455 207 aa10.33□□□□□ -0.76
HERC1-205ENST00000559886 CDK2P24941 298 aa10.33□□□□□ -0.76
HERC1-205ENST00000559886 CD40LGP29965 261 aa10.33□□□□□ -0.76
HERC1-205ENST00000559886 PPP5CP53041 499 aa10.33□□□□□ -0.76
HERC1-205ENST00000559886 C11orf53Q8IXP5 236 aa10.33□□□□□ -0.76
HERC1-205ENST00000559886 DTX3Q8N9I9 347 aa10.33□□□□□ -0.76
HERC1-205ENST00000559886 SLAMF9Q96A28 289 aa10.33□□□□□ -0.76
HERC1-205ENST00000559886 SPOCK3Q9BQ16 436 aa10.33□□□□□ -0.76
HERC1-205ENST00000559886 LPAR5Q9H1C0 372 aa10.33□□□□□ -0.76
HERC1-205ENST00000559886 PCDHB16Q9NRJ7 776 aa10.33□□□□□ -0.76
HERC1-205ENST00000559886 A0A0A6YYH2 397 aa10.33□□□□□ -0.76
HERC1-205ENST00000559886 IGHV3-64DA0A0J9YX35 117 aa10.33□□□□□ -0.76
HERC1-205ENST00000559886 A6NJ64 397 aa10.33□□□□□ -0.76
HERC1-205ENST00000559886 A6NNC1 897 aa10.33□□□□□ -0.76
HERC1-205ENST00000559886 C17orf100A8MU93 164 aa10.33□□□□□ -0.76
HERC1-205ENST00000559886 J3QKU1 62 aa10.33□□□□□ -0.76
HERC1-205ENST00000559886 J3QRK9 145 aa10.33□□□□□ -0.76
HERC1-205ENST00000559886 CDIPTO14735 213 aa10.33□□□□□ -0.76
HERC1-205ENST00000559886 XRCC3O43542 346 aa10.33□□□□□ -0.76
HERC1-205ENST00000559886 RHBDL1O75783 438 aa10.33□□□□□ -0.76
HERC1-205ENST00000559886 GOSR1O95249 250 aa10.33□□□□□ -0.76
HERC1-205ENST00000559886 HTR3BO95264 441 aa10.33□□□□□ -0.76
HERC1-205ENST00000559886 GTF2F2P13984 249 aa10.33□□□□□ -0.76
HERC1-205ENST00000559886 NR4A2P43354 598 aa10.33□□□□□ -0.76
HERC1-205ENST00000559886 NPBWR2P48146 333 aa10.33□□□□□ -0.76
HERC1-205ENST00000559886 PITPNBP48739 271 aa10.33□□□□□ -0.76
HERC1-205ENST00000559886 RPS27AP62979 156 aaKnown RBP10.33□□□□□ -0.76
HERC1-205ENST00000559886 MADCAM1Q13477 382 aa10.33□□□□□ -0.76
HERC1-205ENST00000559886 IL18Q14116 193 aa10.33□□□□□ -0.76
HERC1-205ENST00000559886 FAM189A2Q15884 450 aa10.33□□□□□ -0.76
HERC1-205ENST00000559886 SWI5Q1ZZU3 235 aa10.33□□□□□ -0.76
HERC1-205ENST00000559886 ELP2Q6IA86 826 aa10.33□□□□□ -0.76
HERC1-205ENST00000559886 BAIAP2L2Q6UXY1 529 aa10.33□□□□□ -0.76
HERC1-205ENST00000559886 MUC15Q8N387 334 aa10.33□□□□□ -0.76
HERC1-205ENST00000559886 MRPS24Q96EL2 167 aaKnown RBP10.33□□□□□ -0.76
HERC1-205ENST00000559886 OR2V2Q96R30 315 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms