RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 METTL9Q9H1A3 318 aa8.84□□□□□ -0.99
TPM1-221ENST00000559831 FN3KRPQ9HA64 309 aa8.84□□□□□ -0.99
TPM1-221ENST00000559831 SAP30LQ9HAJ7 183 aa8.84□□□□□ -0.99
TPM1-221ENST00000559831 C1orf123Q9NWV4 160 aa8.84□□□□□ -0.99
TPM1-221ENST00000559831 TREM2Q9NZC2 230 aa8.84□□□□□ -0.99
TPM1-221ENST00000559831 ABRACLQ9P1F3 81 aa8.84□□□□□ -0.99
TPM1-221ENST00000559831 IL19Q9UHD0 177 aa8.84□□□□□ -0.99
TPM1-221ENST00000559831 TMEM272A0A1B0GTI8 110 aa8.83□□□□□ -1
TPM1-221ENST00000559831 TRAPPC2LH3BP13 241 aa8.83□□□□□ -1
TPM1-221ENST00000559831 RGS5O15539 181 aa8.83□□□□□ -1
TPM1-221ENST00000559831 HPGDSO60760 199 aa8.83□□□□□ -1
TPM1-221ENST00000559831 CRTAPO75718 401 aaPredicted RBP8.83□□□□□ -1
TPM1-221ENST00000559831 RHBDL1O75783 438 aa8.83□□□□□ -1
TPM1-221ENST00000559831 CD55P08174 381 aa8.83□□□□□ -1
TPM1-221ENST00000559831 ADH4P08319 380 aa8.83□□□□□ -1
TPM1-221ENST00000559831 UBBP0CG47 229 aa8.83□□□□□ -1
TPM1-221ENST00000559831 CALCBP10092 127 aa8.83□□□□□ -1
TPM1-221ENST00000559831 BMP4P12644 408 aa8.83□□□□□ -1
TPM1-221ENST00000559831 TNFRSF1AP19438 455 aa8.83□□□□□ -1
TPM1-221ENST00000559831 BCL3P20749 454 aa8.83□□□□□ -1
TPM1-221ENST00000559831 CDKN1AP38936 164 aa8.83□□□□□ -1
TPM1-221ENST00000559831 RANBP1P43487 201 aa8.83□□□□□ -1
TPM1-221ENST00000559831 TESK1Q15569 626 aa8.83□□□□□ -1
TPM1-221ENST00000559831 PCGF3Q3KNV8 242 aa8.83□□□□□ -1
TPM1-221ENST00000559831 C2orf76Q3KRA6 126 aa8.83□□□□□ -1
TPM1-221ENST00000559831 SLC22A6Q4U2R8 563 aa8.83□□□□□ -1
TPM1-221ENST00000559831 FAM76BQ5HYJ3 339 aa8.83□□□□□ -1
TPM1-221ENST00000559831 FAM209AQ5JX71 171 aa8.83□□□□□ -1
TPM1-221ENST00000559831 OR10K2Q6IF99 312 aa8.83□□□□□ -1
TPM1-221ENST00000559831 C20orf204Q6ZNR8 217 aa8.83□□□□□ -1
TPM1-221ENST00000559831 C11orf53Q8IXP5 236 aa8.83□□□□□ -1
TPM1-221ENST00000559831 CELF2-AS1Q8N7Q2 184 aa8.83□□□□□ -1
TPM1-221ENST00000559831 SAMD12Q8N8I0 201 aa8.83□□□□□ -1
TPM1-221ENST00000559831 BOLLQ8N9W6 283 aaKnown RBP8.83□□□□□ -1
TPM1-221ENST00000559831 ZSCAN4Q8NAM6 433 aaPredicted RBP8.83□□□□□ -1
TPM1-221ENST00000559831 AQP3Q92482 292 aa8.83□□□□□ -1
TPM1-221ENST00000559831 FAM46BQ96A09 425 aa8.83□□□□□ -1
TPM1-221ENST00000559831 MARVELD3Q96A59 401 aa8.83□□□□□ -1
TPM1-221ENST00000559831 KCTD12Q96CX2 325 aaKnown RBP8.83□□□□□ -1
TPM1-221ENST00000559831 ZNF488Q96MN9 340 aa8.83□□□□□ -1
TPM1-221ENST00000559831 GAL3ST1Q99999 423 aa8.83□□□□□ -1
TPM1-221ENST00000559831 NXF2Q9GZY0 626 aaKnown RBP8.83□□□□□ -1
TPM1-221ENST00000559831 RAB1BQ9H0U4 201 aa8.83□□□□□ -1
TPM1-221ENST00000559831 BANF2Q9H503 90 aa8.83□□□□□ -1
TPM1-221ENST00000559831 PLEKHF2Q9H8W4 249 aa8.83□□□□□ -1
TPM1-221ENST00000559831 OR5V1Q9UGF6 321 aa8.83□□□□□ -1
TPM1-221ENST00000559831 FBXO9Q9UK97 447 aaPredicted RBP8.83□□□□□ -1
TPM1-221ENST00000559831 POLDIP2Q9Y2S7 368 aa8.83□□□□□ -1
TPM1-221ENST00000559831 A0A075B6Q4 140 aa8.82□□□□□ -1
TPM1-221ENST00000559831 IGKV1-12A0A0C4DH73 117 aa8.82□□□□□ -1
TPM1-221ENST00000559831 A0A1W2PP11 408 aa8.82□□□□□ -1
TPM1-221ENST00000559831 FAM25AB3EWG3 89 aa8.82□□□□□ -1
TPM1-221ENST00000559831 FAM25CB3EWG5 89 aa8.82□□□□□ -1
TPM1-221ENST00000559831 FAM25GB3EWG6 89 aa8.82□□□□□ -1
TPM1-221ENST00000559831 C3orf80F5H4A9 247 aa8.82□□□□□ -1
TPM1-221ENST00000559831 CTDSP2O14595 271 aa8.82□□□□□ -1
TPM1-221ENST00000559831 CDC14BO60729 498 aa8.82□□□□□ -1
TPM1-221ENST00000559831 TMEM127O75204 238 aa8.82□□□□□ -1
TPM1-221ENST00000559831 CLPXO76031 633 aa8.82□□□□□ -1
TPM1-221ENST00000559831 MPIG6BO95866 241 aa8.82□□□□□ -1
TPM1-221ENST00000559831 IGKV1D-12P01611 117 aa8.82□□□□□ -1
TPM1-221ENST00000559831 CSTBP04080 98 aaKnown RBP8.82□□□□□ -1
TPM1-221ENST00000559831 VSIG8P0DPA2 414 aa8.82□□□□□ -1
TPM1-221ENST00000559831 CFPP27918 469 aa8.82□□□□□ -1
TPM1-221ENST00000559831 SSTR2P30874 369 aa8.82□□□□□ -1
TPM1-221ENST00000559831 RBMXP38159 391 aaKnown RBP8.82□□□□□ -1
TPM1-221ENST00000559831 NPBWR2P48146 333 aa8.82□□□□□ -1
TPM1-221ENST00000559831 BMXP51813 675 aa8.82□□□□□ -1
TPM1-221ENST00000559831 SNU13P55769 128 aaKnown RBP8.82□□□□□ -1
TPM1-221ENST00000559831 IL24Q13007 206 aa8.82□□□□□ -1
TPM1-221ENST00000559831 PLA2G7Q13093 441 aa8.82□□□□□ -1
TPM1-221ENST00000559831 ZNF787Q6DD87 383 aa8.82□□□□□ -1
TPM1-221ENST00000559831 WDR82Q6UXN9 313 aa8.82□□□□□ -1
TPM1-221ENST00000559831 SAXO1Q8IYX7 474 aa8.82□□□□□ -1
TPM1-221ENST00000559831 PXT1Q8NFP0 134 aa8.82□□□□□ -1
TPM1-221ENST00000559831 OR11L1Q8NGX0 322 aa8.82□□□□□ -1
TPM1-221ENST00000559831 TBC1D15Q8TC07 691 aa8.82□□□□□ -1
TPM1-221ENST00000559831 LRRC29Q8WV35 223 aa8.82□□□□□ -1
TPM1-221ENST00000559831 EMG1Q92979 244 aaKnown RBP8.82□□□□□ -1
TPM1-221ENST00000559831 C14orf79Q96F83 325 aa8.82□□□□□ -1
TPM1-221ENST00000559831 CEP19Q96LK0 163 aa8.82□□□□□ -1
TPM1-221ENST00000559831 CCL19Q99731 98 aa8.82□□□□□ -1
TPM1-221ENST00000559831 MRI1Q9BV20 369 aa8.82□□□□□ -1
TPM1-221ENST00000559831 CST11Q9H112 138 aa8.82□□□□□ -1
TPM1-221ENST00000559831 TLNRD1Q9H1K6 362 aa8.82□□□□□ -1
TPM1-221ENST00000559831 MMP27Q9H306 513 aa8.82□□□□□ -1
TPM1-221ENST00000559831 MTCH1Q9NZJ7 389 aa8.82□□□□□ -1
TPM1-221ENST00000559831 GHRLQ9UBU3 117 aa8.82□□□□□ -1
TPM1-221ENST00000559831 SPATA2Q9UM82 520 aa8.82□□□□□ -1
TPM1-221ENST00000559831 PPP1R3CQ9UQK1 317 aa8.82□□□□□ -1
TPM1-221ENST00000559831 ETV7Q9Y603 341 aa8.82□□□□□ -1
TPM1-221ENST00000559831 HELZ2Q9BYK8 2649 aaKnown RBP8.82□□□□□ -1
TPM1-221ENST00000559831 USP9YO00507 2555 aaPredicted RBP8.81□□□□□ -1
TPM1-221ENST00000559831 AKAP6Q13023 2319 aa8.81□□□□□ -1
TPM1-221ENST00000559831 F8VVB4 439 aa8.81□□□□□ -1
TPM1-221ENST00000559831 F8VWA3 439 aa8.81□□□□□ -1
TPM1-221ENST00000559831 AKR7A2O43488 359 aa8.81□□□□□ -1
TPM1-221ENST00000559831 KDM4BO94953 1096 aa8.81□□□□□ -1
TPM1-221ENST00000559831 PTBP3O95758 552 aaKnown RBP8.81□□□□□ -1
TPM1-221ENST00000559831 CYB5R3P00387 301 aaPredicted RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms