RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 DMRTC1Q5HYR2 192 aa10.6□□□□□ -0.71
TPM1-220ENST00000559556 PLCXD3Q63HM9 321 aa10.6□□□□□ -0.71
TPM1-220ENST00000559556 TMEM200BQ69YZ2 307 aa10.6□□□□□ -0.71
TPM1-220ENST00000559556 KCTD18Q6PI47 426 aaPredicted RBP10.6□□□□□ -0.71
TPM1-220ENST00000559556 PIGWQ7Z7B1 504 aa10.6□□□□□ -0.71
TPM1-220ENST00000559556 Q8N2B8 174 aa10.6□□□□□ -0.71
TPM1-220ENST00000559556 CD177Q8N6Q3 437 aa10.6□□□□□ -0.71
TPM1-220ENST00000559556 BBS1Q8NFJ9 593 aa10.6□□□□□ -0.71
TPM1-220ENST00000559556 WIPF2Q8TF74 440 aaPredicted RBP10.6□□□□□ -0.71
TPM1-220ENST00000559556 CDCA4Q9BXL8 241 aa10.6□□□□□ -0.71
TPM1-220ENST00000559556 YIPF3Q9GZM5 350 aa10.6□□□□□ -0.71
TPM1-220ENST00000559556 GPR84Q9NQS5 396 aa10.6□□□□□ -0.71
TPM1-220ENST00000559556 STAB2Q8WWQ8 2551 aa10.59□□□□□ -0.71
TPM1-220ENST00000559556 TMEM269A0A1B0GVZ9 245 aa10.59□□□□□ -0.71
TPM1-220ENST00000559556 J3QT63 122 aa10.59□□□□□ -0.71
TPM1-220ENST00000559556 XPNPEP2O43895 674 aa10.59□□□□□ -0.71
TPM1-220ENST00000559556 NOS1APO75052 506 aaPredicted RBP10.59□□□□□ -0.71
TPM1-220ENST00000559556 FBXO24O75426 580 aa10.59□□□□□ -0.71
TPM1-220ENST00000559556 CST1P01037 141 aa10.59□□□□□ -0.71
TPM1-220ENST00000559556 HMGN1P05114 100 aa10.59□□□□□ -0.71
TPM1-220ENST00000559556 CCL3L1P16619 93 aa10.59□□□□□ -0.71
TPM1-220ENST00000559556 LGALS4P56470 323 aa10.59□□□□□ -0.71
TPM1-220ENST00000559556 ERVFRD-1P60508 538 aa10.59□□□□□ -0.71
TPM1-220ENST00000559556 RIPPLY1Q0D2K3 151 aa10.59□□□□□ -0.71
TPM1-220ENST00000559556 ZNF273Q14593 569 aa10.59□□□□□ -0.71
TPM1-220ENST00000559556 LCN1P1Q5VSP4 162 aa10.59□□□□□ -0.71
TPM1-220ENST00000559556 TMEM179BQ7Z7N9 219 aa10.59□□□□□ -0.71
TPM1-220ENST00000559556 COMMD2Q86X83 199 aa10.59□□□□□ -0.71
TPM1-220ENST00000559556 CALHM1Q8IU99 346 aa10.59□□□□□ -0.71
TPM1-220ENST00000559556 CCDC197Q8NCU1 140 aa10.59□□□□□ -0.71
TPM1-220ENST00000559556 OR4S1Q8NGB4 309 aa10.59□□□□□ -0.71
TPM1-220ENST00000559556 OR51E1Q8TCB6 317 aa10.59□□□□□ -0.71
TPM1-220ENST00000559556 FOXRED1Q96CU9 486 aaPredicted RBP10.59□□□□□ -0.71
TPM1-220ENST00000559556 ZNF488Q96MN9 340 aa10.59□□□□□ -0.71
TPM1-220ENST00000559556 PBOV1Q9GZY1 135 aa10.59□□□□□ -0.71
TPM1-220ENST00000559556 HES4Q9HCC6 221 aa10.59□□□□□ -0.71
TPM1-220ENST00000559556 NUFIP1Q9UHK0 495 aaKnown RBP10.59□□□□□ -0.71
TPM1-220ENST00000559556 ENPP5Q9UJA9 477 aa10.59□□□□□ -0.71
TPM1-220ENST00000559556 TCF19Q9Y242 345 aa10.59□□□□□ -0.71
TPM1-220ENST00000559556 PIGLQ9Y2B2 252 aa10.59□□□□□ -0.71
TPM1-220ENST00000559556 ADARB2-AS1A8MUL3 147 aa10.58□□□□□ -0.72
TPM1-220ENST00000559556 ODF3BA8MYP8 253 aa10.58□□□□□ -0.72
TPM1-220ENST00000559556 PRR32B1ATL7 298 aa10.58□□□□□ -0.72
TPM1-220ENST00000559556 B2RBV5 119 aa10.58□□□□□ -0.72
TPM1-220ENST00000559556 PSMD9O00233 223 aa10.58□□□□□ -0.72
TPM1-220ENST00000559556 SYNGR1O43759 233 aa10.58□□□□□ -0.72
TPM1-220ENST00000559556 ZNF254O75437 659 aa10.58□□□□□ -0.72
TPM1-220ENST00000559556 DHRS3O75911 302 aa10.58□□□□□ -0.72
TPM1-220ENST00000559556 NXPH2O95156 264 aa10.58□□□□□ -0.72
TPM1-220ENST00000559556 NRASP01111 189 aa10.58□□□□□ -0.72
TPM1-220ENST00000559556 RBP4P02753 201 aa10.58□□□□□ -0.72
TPM1-220ENST00000559556 OSMP13725 252 aa10.58□□□□□ -0.72
TPM1-220ENST00000559556 COX7A1P24310 79 aa10.58□□□□□ -0.72
TPM1-220ENST00000559556 MPZP25189 248 aa10.58□□□□□ -0.72
TPM1-220ENST00000559556 PRDX2P32119 198 aa10.58□□□□□ -0.72
TPM1-220ENST00000559556 CEBPDP49716 269 aaPredicted RBP10.58□□□□□ -0.72
TPM1-220ENST00000559556 HCCSP53701 268 aa10.58□□□□□ -0.72
TPM1-220ENST00000559556 DLX6P56179 175 aa10.58□□□□□ -0.72
TPM1-220ENST00000559556 RPS7P62081 194 aaKnown RBP10.58□□□□□ -0.72
TPM1-220ENST00000559556 ROM1Q03395 351 aa10.58□□□□□ -0.72
TPM1-220ENST00000559556 APOFQ13790 326 aa10.58□□□□□ -0.72
TPM1-220ENST00000559556 HABP2Q14520 560 aaPredicted RBP10.58□□□□□ -0.72
TPM1-220ENST00000559556 ZNF829Q3KNS6 432 aaPredicted RBP10.58□□□□□ -0.72
TPM1-220ENST00000559556 ZNF684Q5T5D7 378 aa10.58□□□□□ -0.72
TPM1-220ENST00000559556 TMEM42Q69YG0 159 aa10.58□□□□□ -0.72
TPM1-220ENST00000559556 MOB3CQ70IA8 216 aa10.58□□□□□ -0.72
TPM1-220ENST00000559556 LHFPL4Q7Z7J7 247 aa10.58□□□□□ -0.72
TPM1-220ENST00000559556 ZNF573Q86YE8 665 aa10.58□□□□□ -0.72
TPM1-220ENST00000559556 ZNF679Q8IYX0 411 aa10.58□□□□□ -0.72
TPM1-220ENST00000559556 LYG1Q8N1E2 194 aa10.58□□□□□ -0.72
TPM1-220ENST00000559556 DYNAPQ8N1N2 210 aa10.58□□□□□ -0.72
TPM1-220ENST00000559556 OR2T27Q8NH04 317 aa10.58□□□□□ -0.72
TPM1-220ENST00000559556 ASB9Q96DX5 294 aa10.58□□□□□ -0.72
TPM1-220ENST00000559556 OR8B4Q96RC9 309 aa10.58□□□□□ -0.72
TPM1-220ENST00000559556 TEAD3Q99594 435 aa10.58□□□□□ -0.72
TPM1-220ENST00000559556 NKX3-1Q99801 234 aaPredicted RBP10.58□□□□□ -0.72
TPM1-220ENST00000559556 NRIP2Q9BQI9 281 aa10.58□□□□□ -0.72
TPM1-220ENST00000559556 MROQ9BYG7 248 aa10.58□□□□□ -0.72
TPM1-220ENST00000559556 SLC25A19Q9HC21 320 aa10.58□□□□□ -0.72
TPM1-220ENST00000559556 TBL2Q9Y4P3 447 aaKnown RBP10.58□□□□□ -0.72
TPM1-220ENST00000559556 A6NDX4 124 aa10.57□□□□□ -0.72
TPM1-220ENST00000559556 CCDC182A6NF36 153 aa10.57□□□□□ -0.72
TPM1-220ENST00000559556 C17orf98A8MV24 154 aa10.57□□□□□ -0.72
TPM1-220ENST00000559556 GSC2O15499 205 aa10.57□□□□□ -0.72
TPM1-220ENST00000559556 SRSF10O75494 262 aaKnown RBP10.57□□□□□ -0.72
TPM1-220ENST00000559556 ALX3O95076 343 aa10.57□□□□□ -0.72
TPM1-220ENST00000559556 TTRP02766 147 aa10.57□□□□□ -0.72
TPM1-220ENST00000559556 TK1P04183 234 aa10.57□□□□□ -0.72
TPM1-220ENST00000559556 CD28P10747 220 aa10.57□□□□□ -0.72
TPM1-220ENST00000559556 HAAOP46952 286 aa10.57□□□□□ -0.72
TPM1-220ENST00000559556 EMX1Q04741 257 aaPredicted RBP10.57□□□□□ -0.72
TPM1-220ENST00000559556 MFGE8Q08431 387 aaPredicted RBP10.57□□□□□ -0.72
TPM1-220ENST00000559556 CNN3Q15417 329 aaKnown RBP10.57□□□□□ -0.72
TPM1-220ENST00000559556 NSUN5P1Q3KNT7 163 aa10.57□□□□□ -0.72
TPM1-220ENST00000559556 OXLD1Q5BKU9 147 aa10.57□□□□□ -0.72
TPM1-220ENST00000559556 CCBE1Q6UXH8 406 aaPredicted RBP10.57□□□□□ -0.72
TPM1-220ENST00000559556 ZNF782Q6ZMW2 699 aaPredicted RBP10.57□□□□□ -0.72
TPM1-220ENST00000559556 NDUFA11Q86Y39 141 aa10.57□□□□□ -0.72
TPM1-220ENST00000559556 ADGRG5Q8IZF4 528 aa10.57□□□□□ -0.72
TPM1-220ENST00000559556 OR4M1Q8NGD0 313 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms