RNA–Protein interactions for RNA: ENST00000558919.1

VPS13C-207, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 5

Gene VPS13C, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-207ENST00000558919 LINC00469Q8N7U9 141 aa1.4□□□□□ -2.19
VPS13C-207ENST00000558919 ASCC1Q8N9N2 400 aaKnown RBP1.4□□□□□ -2.19
VPS13C-207ENST00000558919 WDR31Q8NA23 367 aa1.4□□□□□ -2.19
VPS13C-207ENST00000558919 SPERTQ8NA61 448 aa1.4□□□□□ -2.19
VPS13C-207ENST00000558919 OR13C9Q8NGT0 318 aa1.4□□□□□ -2.19
VPS13C-207ENST00000558919 OR6K6Q8NGW6 343 aa1.4□□□□□ -2.19
VPS13C-207ENST00000558919 OR8K3Q8NH51 312 aa1.4□□□□□ -2.19
VPS13C-207ENST00000558919 OR1S1Q8NH92 325 aa1.4□□□□□ -2.19
VPS13C-207ENST00000558919 TCP10LQ8TDR4 215 aa1.4□□□□□ -2.19
VPS13C-207ENST00000558919 RXFP2Q8WXD0 754 aa1.4□□□□□ -2.19
VPS13C-207ENST00000558919 BAALCQ8WXS3 180 aa1.4□□□□□ -2.19
VPS13C-207ENST00000558919 OR8D1Q8WZ84 308 aa1.4□□□□□ -2.19
VPS13C-207ENST00000558919 TOP1MTQ969P6 601 aa1.4□□□□□ -2.19
VPS13C-207ENST00000558919 CIDECQ96AQ7 238 aaPredicted RBP1.4□□□□□ -2.19
VPS13C-207ENST00000558919 C19orf60Q96EN9 201 aa1.4□□□□□ -2.19
VPS13C-207ENST00000558919 TMEM175Q9BSA9 504 aa1.4□□□□□ -2.19
VPS13C-207ENST00000558919 FBXO44Q9H4M3 255 aa1.4□□□□□ -2.19
VPS13C-207ENST00000558919 KIR3DX1Q9H7L2 352 aa1.4□□□□□ -2.19
VPS13C-207ENST00000558919 FBXO8Q9NRD0 319 aa1.4□□□□□ -2.19
VPS13C-207ENST00000558919 HEBP1Q9NRV9 189 aa1.4□□□□□ -2.19
VPS13C-207ENST00000558919 AGPAT3Q9NRZ7 376 aa1.4□□□□□ -2.19
VPS13C-207ENST00000558919 CFAP45Q9UL16 551 aa1.4□□□□□ -2.19
VPS13C-207ENST00000558919 LRRC42Q9Y546 428 aa1.4□□□□□ -2.19
VPS13C-207ENST00000558919 ZBED9Q6R2W3 1325 aa1.4□□□□□ -2.19
VPS13C-207ENST00000558919 AQRO60306 1485 aaKnown RBP eCLIP1.39□□□□□ -2.19
VPS13C-207ENST00000558919 IGHV2OR16-5A0A0B4J2B6 119 aa1.39□□□□□ -2.19
VPS13C-207ENST00000558919 CCL15-CCL14A0A0B4J2E2 113 aa1.39□□□□□ -2.19
VPS13C-207ENST00000558919 LOC100506127A0A0U1RQW1 187 aa1.39□□□□□ -2.19
VPS13C-207ENST00000558919 LOC100653049A0A140TA62 436 aa1.39□□□□□ -2.19
VPS13C-207ENST00000558919 LINC00854A0A1B0GVQ3 168 aa1.39□□□□□ -2.19
VPS13C-207ENST00000558919 ZNF879B4DU55 563 aa1.39□□□□□ -2.19
VPS13C-207ENST00000558919 DFFAO00273 331 aa1.39□□□□□ -2.19
VPS13C-207ENST00000558919 KRT34O76011 436 aa1.39□□□□□ -2.19
VPS13C-207ENST00000558919 PLEKHA8P1O95397 391 aa1.39□□□□□ -2.19
VPS13C-207ENST00000558919 ETHE1O95571 254 aa1.39□□□□□ -2.19
VPS13C-207ENST00000558919 FSTL3O95633 263 aa1.39□□□□□ -2.19
VPS13C-207ENST00000558919 SLC35G6P0C7Q6 338 aa1.39□□□□□ -2.19
VPS13C-207ENST00000558919 CD28P10747 220 aa1.39□□□□□ -2.19
VPS13C-207ENST00000558919 PRSS3P35030 304 aa1.39□□□□□ -2.19
VPS13C-207ENST00000558919 HADHBP55084 474 aaKnown RBP1.39□□□□□ -2.19
VPS13C-207ENST00000558919 TAS2R43P59537 309 aa1.39□□□□□ -2.19
VPS13C-207ENST00000558919 PAFAH1B2P68402 229 aa1.39□□□□□ -2.19
VPS13C-207ENST00000558919 SLC35A1P78382 337 aa1.39□□□□□ -2.19
VPS13C-207ENST00000558919 SLC35B1P78383 322 aa1.39□□□□□ -2.19
VPS13C-207ENST00000558919 ST3GAL4Q11206 333 aa1.39□□□□□ -2.19
VPS13C-207ENST00000558919 CCL15Q16663 113 aa1.39□□□□□ -2.19
VPS13C-207ENST00000558919 Q3ZCU0 254 aa1.39□□□□□ -2.19
VPS13C-207ENST00000558919 CPTPQ5TA50 214 aa1.39□□□□□ -2.19
VPS13C-207ENST00000558919 KDM4DQ6B0I6 523 aa1.39□□□□□ -2.19
VPS13C-207ENST00000558919 APOBEC3HQ6NTF7 200 aaKnown RBP1.39□□□□□ -2.19
VPS13C-207ENST00000558919 ASCL4Q6XD76 172 aa1.39□□□□□ -2.19
VPS13C-207ENST00000558919 FAM58AQ8N1B3 248 aa1.39□□□□□ -2.19
VPS13C-207ENST00000558919 ARHGAP18Q8N392 663 aa1.39□□□□□ -2.19
VPS13C-207ENST00000558919 OR4M2Q8NGB6 313 aa1.39□□□□□ -2.19
VPS13C-207ENST00000558919 OR51L1Q8NGJ5 315 aa1.39□□□□□ -2.19
VPS13C-207ENST00000558919 OR4A15Q8NGL6 344 aa1.39□□□□□ -2.19
VPS13C-207ENST00000558919 CMTM2Q8TAZ6 248 aa1.39□□□□□ -2.19
VPS13C-207ENST00000558919 SFXN5Q8TD22 340 aa1.39□□□□□ -2.19
VPS13C-207ENST00000558919 TMEM234Q8WY98 164 aa1.39□□□□□ -2.19
VPS13C-207ENST00000558919 TFGQ92734 400 aaPredicted RBP1.39□□□□□ -2.19
VPS13C-207ENST00000558919 MRPL48Q96GC5 212 aaKnown RBP1.39□□□□□ -2.19
VPS13C-207ENST00000558919 MSANTD3Q96H12 275 aa1.39□□□□□ -2.19
VPS13C-207ENST00000558919 SNF8Q96H20 258 aa1.39□□□□□ -2.19
VPS13C-207ENST00000558919 STACQ99469 402 aa1.39□□□□□ -2.19
VPS13C-207ENST00000558919 TM6SF2Q9BZW4 377 aa1.39□□□□□ -2.19
VPS13C-207ENST00000558919 ARV1Q9H2C2 271 aa1.39□□□□□ -2.19
VPS13C-207ENST00000558919 GAL3ST2Q9H3Q3 398 aa1.39□□□□□ -2.19
VPS13C-207ENST00000558919 ZMAT5Q9UDW3 170 aaKnown RBP1.39□□□□□ -2.19
VPS13C-207ENST00000558919 VAX2Q9UIW0 290 aa1.39□□□□□ -2.19
VPS13C-207ENST00000558919 NDRG2Q9UN36 371 aaKnown RBP1.39□□□□□ -2.19
VPS13C-207ENST00000558919 FLVCR2Q9UPI3 526 aa1.39□□□□□ -2.19
VPS13C-207ENST00000558919 SAMHD1Q9Y3Z3 626 aaKnown RBP1.39□□□□□ -2.19
VPS13C-207ENST00000558919 KLF12Q9Y4X4 402 aa1.39□□□□□ -2.19
VPS13C-207ENST00000558919 KPTNQ9Y664 436 aa1.39□□□□□ -2.19
VPS13C-207ENST00000558919 ZNF608Q9ULD9 1512 aaPredicted RBP1.39□□□□□ -2.19
VPS13C-207ENST00000558919 MIA3Q5JRA6 1907 aa1.38□□□□□ -2.19
VPS13C-207ENST00000558919 AK9Q5TCS8 1911 aa1.38□□□□□ -2.19
VPS13C-207ENST00000558919 IGHV6-1A0A0B4J1U7 121 aa1.38□□□□□ -2.19
VPS13C-207ENST00000558919 TRAV8-4A0A0B4J246 113 aa1.38□□□□□ -2.19
VPS13C-207ENST00000558919 A8MWL6 223 aa1.38□□□□□ -2.19
VPS13C-207ENST00000558919 PSMD11O00231 422 aa1.38□□□□□ -2.19
VPS13C-207ENST00000558919 YKT6O15498 198 aa1.38□□□□□ -2.19
VPS13C-207ENST00000558919 KDELR3O43731 214 aa1.38□□□□□ -2.19
VPS13C-207ENST00000558919 CCDC22O60826 627 aa1.38□□□□□ -2.19
VPS13C-207ENST00000558919 P01737 135 aa1.38□□□□□ -2.19
VPS13C-207ENST00000558919 APOA1P02647 267 aa1.38□□□□□ -2.19
VPS13C-207ENST00000558919 PRKACBP22694 351 aa1.38□□□□□ -2.19
VPS13C-207ENST00000558919 HLA-DMAP28067 261 aa1.38□□□□□ -2.19
VPS13C-207ENST00000558919 HCCSP53701 268 aa1.38□□□□□ -2.19
VPS13C-207ENST00000558919 MTPNP58546 118 aa1.38□□□□□ -2.19
VPS13C-207ENST00000558919 TAS2R60P59551 318 aa1.38□□□□□ -2.19
VPS13C-207ENST00000558919 DMTNQ08495 405 aa1.38□□□□□ -2.19
VPS13C-207ENST00000558919 ATP6V1FQ16864 119 aa1.38□□□□□ -2.19
VPS13C-207ENST00000558919 LIN9Q5TKA1 542 aa1.38□□□□□ -2.19
VPS13C-207ENST00000558919 DAZ4Q86SG3 579 aaKnown RBP1.38□□□□□ -2.19
VPS13C-207ENST00000558919 SLC7A5P1Q8MH63 180 aa1.38□□□□□ -2.19
VPS13C-207ENST00000558919 TCAIMQ8N3R3 496 aa1.38□□□□□ -2.19
VPS13C-207ENST00000558919 RNF10Q8N5U6 811 aaKnown RBP1.38□□□□□ -2.19
VPS13C-207ENST00000558919 SLC25A29Q8N8R3 303 aa1.38□□□□□ -2.19
VPS13C-207ENST00000558919 OR52N1Q8NH53 320 aa1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms