RNA–Protein interactions for RNA: ENST00000558335.5

GABPB1-207, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-207ENST00000558335 ZNF41P51814 821 aaPredicted RBP4.88□□□□□ -1.63
GABPB1-207ENST00000558335 EFNA3P52797 238 aa4.88□□□□□ -1.63
GABPB1-207ENST00000558335 CLDN12P56749 244 aa4.88□□□□□ -1.63
GABPB1-207ENST00000558335 PPIAP62937 165 aaKnown RBP4.88□□□□□ -1.63
GABPB1-207ENST00000558335 GRB2P62993 217 aaKnown RBP4.88□□□□□ -1.63
GABPB1-207ENST00000558335 PLAURQ03405 335 aa4.88□□□□□ -1.63
GABPB1-207ENST00000558335 ZNF117Q03924 483 aa4.88□□□□□ -1.63
GABPB1-207ENST00000558335 PMPCAQ10713 525 aa4.88□□□□□ -1.63
GABPB1-207ENST00000558335 TRA2AQ13595 282 aaKnown RBP eCLIP4.88□□□□□ -1.63
GABPB1-207ENST00000558335 FZD2Q14332 565 aa4.88□□□□□ -1.63
GABPB1-207ENST00000558335 HERPUD1Q15011 391 aa4.88□□□□□ -1.63
GABPB1-207ENST00000558335 RAB35Q15286 201 aa4.88□□□□□ -1.63
GABPB1-207ENST00000558335 TAF13Q15543 124 aa4.88□□□□□ -1.63
GABPB1-207ENST00000558335 ACKR1Q16570 336 aa4.88□□□□□ -1.63
GABPB1-207ENST00000558335 TMEM128Q5BJH2 165 aa4.88□□□□□ -1.63
GABPB1-207ENST00000558335 VAX1Q5SQQ9 334 aa4.88□□□□□ -1.63
GABPB1-207ENST00000558335 GLYATL3Q5SZD4 288 aa4.88□□□□□ -1.63
GABPB1-207ENST00000558335 GGNBP1Q5YKI7 109 aa4.88□□□□□ -1.63
GABPB1-207ENST00000558335 NCR3LG1Q68D85 454 aa4.88□□□□□ -1.63
GABPB1-207ENST00000558335 ESPNLQ6ZVH7 1005 aa4.88□□□□□ -1.63
GABPB1-207ENST00000558335 PRSS41Q7RTY9 318 aa4.88□□□□□ -1.63
GABPB1-207ENST00000558335 SFTPA1Q8IWL2 248 aa4.88□□□□□ -1.63
GABPB1-207ENST00000558335 C1orf87Q8N0U7 546 aa4.88□□□□□ -1.63
GABPB1-207ENST00000558335 FAM58AQ8N1B3 248 aa4.88□□□□□ -1.63
GABPB1-207ENST00000558335 ZNF664Q8N3J9 261 aa4.88□□□□□ -1.63
GABPB1-207ENST00000558335 GTPBP8Q8N3Z3 284 aaPredicted RBP4.88□□□□□ -1.63
GABPB1-207ENST00000558335 JAGN1Q8N5M9 183 aa4.88□□□□□ -1.63
GABPB1-207ENST00000558335 RFLNBQ8N5W9 214 aa4.88□□□□□ -1.63
GABPB1-207ENST00000558335 CCDC71LQ8N9Z2 235 aa4.88□□□□□ -1.63
GABPB1-207ENST00000558335 CADM4Q8NFZ8 388 aa4.88□□□□□ -1.63
GABPB1-207ENST00000558335 OR4N2Q8NGD1 307 aa4.88□□□□□ -1.63
GABPB1-207ENST00000558335 OR10AD1Q8NGE0 317 aa4.88□□□□□ -1.63
GABPB1-207ENST00000558335 OR5AP2Q8NGF4 316 aa4.88□□□□□ -1.63
GABPB1-207ENST00000558335 OR10W1Q8NGF6 305 aa4.88□□□□□ -1.63
GABPB1-207ENST00000558335 OR14K1Q8NGZ2 314 aa4.88□□□□□ -1.63
GABPB1-207ENST00000558335 PTPMT1Q8WUK0 201 aaPredicted RBP4.88□□□□□ -1.63
GABPB1-207ENST00000558335 PCNPQ8WW12 178 aaKnown RBP4.88□□□□□ -1.63
GABPB1-207ENST00000558335 AQP3Q92482 292 aa4.88□□□□□ -1.63
GABPB1-207ENST00000558335 FGF14Q92915 247 aa4.88□□□□□ -1.63
GABPB1-207ENST00000558335 ADIPOR1Q96A54 375 aa4.88□□□□□ -1.63
GABPB1-207ENST00000558335 C8orf44Q96CB5 159 aa4.88□□□□□ -1.63
GABPB1-207ENST00000558335 KTI12Q96EK9 354 aaPredicted RBP4.88□□□□□ -1.63
GABPB1-207ENST00000558335 ATG101Q9BSB4 218 aa4.88□□□□□ -1.63
GABPB1-207ENST00000558335 LRFN3Q9BTN0 628 aa4.88□□□□□ -1.63
GABPB1-207ENST00000558335 ABHD6Q9BV23 337 aa4.88□□□□□ -1.63
GABPB1-207ENST00000558335 NUDT9Q9BW91 350 aa4.88□□□□□ -1.63
GABPB1-207ENST00000558335 PRO1933Q9H354 126 aa4.88□□□□□ -1.63
GABPB1-207ENST00000558335 IGFLR1Q9H665 355 aa4.88□□□□□ -1.63
GABPB1-207ENST00000558335 SYNPO2LQ9H987 977 aa4.88□□□□□ -1.63
GABPB1-207ENST00000558335 BEX1Q9HBH7 125 aa4.88□□□□□ -1.63
GABPB1-207ENST00000558335 LPAR2Q9HBW0 351 aa4.88□□□□□ -1.63
GABPB1-207ENST00000558335 ALKBH4Q9NXW9 302 aa4.88□□□□□ -1.63
GABPB1-207ENST00000558335 MRPL15Q9P015 296 aaKnown RBP4.88□□□□□ -1.63
GABPB1-207ENST00000558335 C19orf25Q9UFG5 118 aaPredicted RBP4.88□□□□□ -1.63
GABPB1-207ENST00000558335 TNFSF18Q9UNG2 199 aa4.88□□□□□ -1.63
GABPB1-207ENST00000558335 FLVCR2Q9UPI3 526 aa4.88□□□□□ -1.63
GABPB1-207ENST00000558335 MRPS17Q9Y2R5 130 aaKnown RBP4.88□□□□□ -1.63
GABPB1-207ENST00000558335 TRAV8-7A0A075B6U6 113 aa4.87□□□□□ -1.63
GABPB1-207ENST00000558335 TRAV30A0A087WSZ9 112 aa4.87□□□□□ -1.63
GABPB1-207ENST00000558335 A0A087WWC5 75 aa4.87□□□□□ -1.63
GABPB1-207ENST00000558335 IGKV3D-11A0A0A0MRZ8 115 aa4.87□□□□□ -1.63
GABPB1-207ENST00000558335 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.87□□□□□ -1.63
GABPB1-207ENST00000558335 LOC102725191A0A1B0GVB3 256 aa4.87□□□□□ -1.63
GABPB1-207ENST00000558335 LOC107986453A0A1B0GWG9 222 aa4.87□□□□□ -1.63
GABPB1-207ENST00000558335 A0A1B0GX78 115 aa4.87□□□□□ -1.63
GABPB1-207ENST00000558335 RNF222A6NCQ9 220 aa4.87□□□□□ -1.63
GABPB1-207ENST00000558335 FIGNL2A6NMB9 653 aa4.87□□□□□ -1.63
GABPB1-207ENST00000558335 CEACAM18A8MTB9 384 aa4.87□□□□□ -1.63
GABPB1-207ENST00000558335 ZNF878C9JN71 531 aa4.87□□□□□ -1.63
GABPB1-207ENST00000558335 LMO7DNF2Z398 122 aa4.87□□□□□ -1.63
GABPB1-207ENST00000558335 G3V3Q6 166 aa4.87□□□□□ -1.63
GABPB1-207ENST00000558335 TRAPPC2LH3BP13 241 aa4.87□□□□□ -1.63
GABPB1-207ENST00000558335 SOX1O00570 391 aaPredicted RBP4.87□□□□□ -1.63
GABPB1-207ENST00000558335 EREGO14944 169 aa4.87□□□□□ -1.63
GABPB1-207ENST00000558335 STK17BO94768 372 aa4.87□□□□□ -1.63
GABPB1-207ENST00000558335 SIX6O95475 246 aa4.87□□□□□ -1.63
GABPB1-207ENST00000558335 SCGB1D1O95968 90 aa4.87□□□□□ -1.63
GABPB1-207ENST00000558335 KNG1P01042 644 aa4.87□□□□□ -1.63
GABPB1-207ENST00000558335 IGHG1P01857 330 aa4.87□□□□□ -1.63
GABPB1-207ENST00000558335 IL6RP08887 468 aaPredicted RBP4.87□□□□□ -1.63
GABPB1-207ENST00000558335 OR5H8P0DN80 308 aa4.87□□□□□ -1.63
GABPB1-207ENST00000558335 VSIG10L2P0DP72 767 aa4.87□□□□□ -1.63
GABPB1-207ENST00000558335 CCL2P13500 99 aa4.87□□□□□ -1.63
GABPB1-207ENST00000558335 FOLR1P15328 257 aa4.87□□□□□ -1.63
GABPB1-207ENST00000558335 FOSL2P15408 326 aa4.87□□□□□ -1.63
GABPB1-207ENST00000558335 GABRG2P18507 467 aa4.87□□□□□ -1.63
GABPB1-207ENST00000558335 MAOAP21397 527 aa4.87□□□□□ -1.63
GABPB1-207ENST00000558335 ANOS1P23352 680 aa4.87□□□□□ -1.63
GABPB1-207ENST00000558335 CPT2P23786 658 aa4.87□□□□□ -1.63
GABPB1-207ENST00000558335 ZBTB25P24278 435 aa4.87□□□□□ -1.63
GABPB1-207ENST00000558335 ACKR3P25106 362 aa4.87□□□□□ -1.63
GABPB1-207ENST00000558335 MST1P26927 711 aa4.87□□□□□ -1.63
GABPB1-207ENST00000558335 CD38P28907 300 aa4.87□□□□□ -1.63
GABPB1-207ENST00000558335 GRPRP30550 384 aa4.87□□□□□ -1.63
GABPB1-207ENST00000558335 BRS3P32247 399 aa4.87□□□□□ -1.63
GABPB1-207ENST00000558335 NPBWR1P48145 328 aa4.87□□□□□ -1.63
GABPB1-207ENST00000558335 ZNF133P52736 654 aaPredicted RBP4.87□□□□□ -1.63
GABPB1-207ENST00000558335 DVL1P1P54792 670 aaPredicted RBP4.87□□□□□ -1.63
GABPB1-207ENST00000558335 NDUFA6P56556 154 aa4.87□□□□□ -1.63
GABPB1-207ENST00000558335 H2BFSP57053 126 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms