RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 RPS27P42677 84 aaKnown RBP3.3□□□□□ -1.88
ATXN3-248ENST00000558190 ARG2P78540 354 aa3.3□□□□□ -1.88
ATXN3-248ENST00000558190 ARRDC1Q8N5I2 433 aa3.3□□□□□ -1.88
ATXN3-248ENST00000558190 NHLRC2Q8NBF2 726 aa3.3□□□□□ -1.88
ATXN3-248ENST00000558190 MANSC4A6NHS7 340 aaPredicted RBP3.3□□□□□ -1.88
ATXN3-248ENST00000558190 ECI1P42126 302 aa3.3□□□□□ -1.88
ATXN3-248ENST00000558190 FCRL6Q6DN72 434 aa3.3□□□□□ -1.88
ATXN3-248ENST00000558190 S1PR5Q9H228 398 aa3.3□□□□□ -1.88
ATXN3-248ENST00000558190 ZNF608Q9ULD9 1512 aaPredicted RBP3.3□□□□□ -1.88
ATXN3-248ENST00000558190 CD74P04233 296 aa3.3□□□□□ -1.88
ATXN3-248ENST00000558190 FAM87AP0C7U9 286 aa3.3□□□□□ -1.88
ATXN3-248ENST00000558190 TBPL1P62380 186 aa3.3□□□□□ -1.88
ATXN3-248ENST00000558190 FNDC7Q5VTL7 733 aa3.3□□□□□ -1.88
ATXN3-248ENST00000558190 MYOZ3Q8TDC0 251 aa3.3□□□□□ -1.88
ATXN3-248ENST00000558190 SMIM19Q96E16 107 aa3.3□□□□□ -1.88
ATXN3-248ENST00000558190 ZNF355PQ9NSJ1 428 aa3.3□□□□□ -1.88
ATXN3-248ENST00000558190 KCNE5Q9UJ90 142 aa3.3□□□□□ -1.88
ATXN3-248ENST00000558190 SLC45A1Q9Y2W3 748 aa3.3□□□□□ -1.88
ATXN3-248ENST00000558190 CCL27Q9Y4X3 112 aa3.3□□□□□ -1.88
ATXN3-248ENST00000558190 A0A1B0GWJ7 208 aa3.3□□□□□ -1.88
ATXN3-248ENST00000558190 TRDCB7Z8K6 153 aa3.3□□□□□ -1.88
ATXN3-248ENST00000558190 EXT1Q16394 746 aa3.3□□□□□ -1.88
ATXN3-248ENST00000558190 ZNF260Q3ZCT1 412 aa3.3□□□□□ -1.88
ATXN3-248ENST00000558190 MFSD12Q6NUT3 480 aa3.3□□□□□ -1.88
ATXN3-248ENST00000558190 FAM219AQ8IW50 185 aa3.3□□□□□ -1.88
ATXN3-248ENST00000558190 TMEM191AQ9H0A3 160 aa3.3□□□□□ -1.88
ATXN3-248ENST00000558190 ST3GAL6Q9Y274 331 aa3.3□□□□□ -1.88
ATXN3-248ENST00000558190 MRPL33O75394 65 aaKnown RBP3.29□□□□□ -1.88
ATXN3-248ENST00000558190 EPPINO95925 133 aa3.29□□□□□ -1.88
ATXN3-248ENST00000558190 SOX8P57073 446 aa3.29□□□□□ -1.88
ATXN3-248ENST00000558190 METRNLQ641Q3 311 aa3.29□□□□□ -1.88
ATXN3-248ENST00000558190 PGLYRP4Q96LB8 373 aa3.29□□□□□ -1.88
ATXN3-248ENST00000558190 M0QZQ0 153 aa3.29□□□□□ -1.88
ATXN3-248ENST00000558190 OTX1P32242 354 aaPredicted RBP3.29□□□□□ -1.88
ATXN3-248ENST00000558190 NOVP48745 357 aa3.29□□□□□ -1.88
ATXN3-248ENST00000558190 EFNB2P52799 333 aa3.29□□□□□ -1.88
ATXN3-248ENST00000558190 FUT7Q11130 342 aa3.29□□□□□ -1.88
ATXN3-248ENST00000558190 SIRT6Q8N6T7 355 aa3.29□□□□□ -1.88
ATXN3-248ENST00000558190 QTRT1Q9BXR0 403 aaKnown RBP3.29□□□□□ -1.88
ATXN3-248ENST00000558190 SHANK1Q9Y566 2161 aa3.29□□□□□ -1.88
ATXN3-248ENST00000558190 TYMSP04818 313 aa3.29□□□□□ -1.88
ATXN3-248ENST00000558190 LSM6P62312 80 aaKnown RBP3.29□□□□□ -1.88
ATXN3-248ENST00000558190 GGTA1PQ4G0N0 100 aa3.29□□□□□ -1.88
ATXN3-248ENST00000558190 LAIR1Q6GTX8 287 aa3.29□□□□□ -1.88
ATXN3-248ENST00000558190 KTI12Q96EK9 354 aaPredicted RBP3.29□□□□□ -1.88
ATXN3-248ENST00000558190 LRRC3BQ96PB8 259 aa3.29□□□□□ -1.88
ATXN3-248ENST00000558190 NRIP2Q9BQI9 281 aa3.29□□□□□ -1.88
ATXN3-248ENST00000558190 PMS2P1A4D2B8 440 aa3.29□□□□□ -1.88
ATXN3-248ENST00000558190 ESDP10768 282 aa3.29□□□□□ -1.88
ATXN3-248ENST00000558190 EPHA8P29322 1005 aaPredicted RBP3.29□□□□□ -1.88
ATXN3-248ENST00000558190 SMAGPQ0VAQ4 97 aa3.29□□□□□ -1.88
ATXN3-248ENST00000558190 ZNF664Q8N3J9 261 aa3.29□□□□□ -1.88
ATXN3-248ENST00000558190 C1QCP02747 245 aa3.29□□□□□ -1.88
ATXN3-248ENST00000558190 ELNP15502 786 aa3.29□□□□□ -1.88
ATXN3-248ENST00000558190 PRTGQ2VWP7 1150 aa3.29□□□□□ -1.88
ATXN3-248ENST00000558190 PPP1R35Q8TAP8 253 aa3.29□□□□□ -1.88
ATXN3-248ENST00000558190 C3orf85A0A1B0GTC6 90 aa3.29□□□□□ -1.88
ATXN3-248ENST00000558190 FAM166BA8MTA8 275 aa3.29□□□□□ -1.88
ATXN3-248ENST00000558190 H3BML4 177 aa3.29□□□□□ -1.88
ATXN3-248ENST00000558190 ABHD16AO95870 558 aa3.29□□□□□ -1.88
ATXN3-248ENST00000558190 CYBAP13498 195 aa3.29□□□□□ -1.88
ATXN3-248ENST00000558190 MGAT2Q10469 447 aa3.29□□□□□ -1.88
ATXN3-248ENST00000558190 TSPO2Q5TGU0 170 aa3.29□□□□□ -1.88
ATXN3-248ENST00000558190 EDAQ92838 391 aa3.29□□□□□ -1.88
ATXN3-248ENST00000558190 PELI1Q96FA3 418 aa3.29□□□□□ -1.88
ATXN3-248ENST00000558190 PGLYRP3Q96LB9 341 aa3.29□□□□□ -1.88
ATXN3-248ENST00000558190 PARLQ9H300 379 aa3.29□□□□□ -1.88
ATXN3-248ENST00000558190 TXNIPQ9H3M7 391 aa3.29□□□□□ -1.88
ATXN3-248ENST00000558190 OR51B4Q9Y5P0 310 aa3.29□□□□□ -1.88
ATXN3-248ENST00000558190 PGLYRP1O75594 196 aaPredicted RBP3.29□□□□□ -1.88
ATXN3-248ENST00000558190 DEFA4P12838 97 aa3.29□□□□□ -1.88
ATXN3-248ENST00000558190 CD33P20138 364 aa3.29□□□□□ -1.88
ATXN3-248ENST00000558190 SPRYD7Q5W111 196 aa3.29□□□□□ -1.88
ATXN3-248ENST00000558190 MOB3AQ96BX8 217 aa3.29□□□□□ -1.88
ATXN3-248ENST00000558190 ANKRD10Q9NXR5 420 aa3.29□□□□□ -1.88
ATXN3-248ENST00000558190 K7EQM0 130 aa3.29□□□□□ -1.88
ATXN3-248ENST00000558190 SLC17A2O00624 439 aa3.29□□□□□ -1.88
ATXN3-248ENST00000558190 C5orf17Q8NAS9 161 aa3.29□□□□□ -1.88
ATXN3-248ENST00000558190 FTSJ1Q9UET6 329 aa3.29□□□□□ -1.88
ATXN3-248ENST00000558190 MEX3AA1L020 520 aaKnown RBP3.29□□□□□ -1.88
ATXN3-248ENST00000558190 HOXA3O43365 443 aaPredicted RBP3.29□□□□□ -1.88
ATXN3-248ENST00000558190 FAM157CP0CG43 387 aa3.29□□□□□ -1.88
ATXN3-248ENST00000558190 MFAP2P55001 183 aa3.29□□□□□ -1.88
ATXN3-248ENST00000558190 TMEM50BP56557 158 aa3.29□□□□□ -1.88
ATXN3-248ENST00000558190 NPEPL1Q8NDH3 523 aa3.29□□□□□ -1.88
ATXN3-248ENST00000558190 MS4A6EQ96DS6 147 aa3.29□□□□□ -1.88
ATXN3-248ENST00000558190 LOXL4Q96JB6 756 aa3.29□□□□□ -1.88
ATXN3-248ENST00000558190 DIRC2Q96SL1 478 aa3.29□□□□□ -1.88
ATXN3-248ENST00000558190 MRPL37Q9BZE1 423 aaKnown RBP3.29□□□□□ -1.88
ATXN3-248ENST00000558190 HEXA-AS1Q9H8Q6 139 aa3.29□□□□□ -1.88
ATXN3-248ENST00000558190 TSPOAP1O95153 1857 aa3.29□□□□□ -1.88
ATXN3-248ENST00000558190 ST6GAL1P15907 406 aa3.29□□□□□ -1.88
ATXN3-248ENST00000558190 FAHP16930 419 aa3.29□□□□□ -1.88
ATXN3-248ENST00000558190 IGFBP2P18065 325 aa3.29□□□□□ -1.88
ATXN3-248ENST00000558190 C22orf39Q6P5X5 142 aa3.29□□□□□ -1.88
ATXN3-248ENST00000558190 PPIAL4AQ9Y536 164 aa3.29□□□□□ -1.88
ATXN3-248ENST00000558190 C1QAP02745 245 aa3.29□□□□□ -1.88
ATXN3-248ENST00000558190 TNFSF10P50591 281 aa3.29□□□□□ -1.88
ATXN3-248ENST00000558190 AESQ08117 197 aa3.29□□□□□ -1.88
ATXN3-248ENST00000558190 C8orf82Q6P1X6 216 aaPredicted RBP3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms