RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 ZBTB49Q6ZSB9 765 aa4.13□□□□□ -1.75
SPG11-208ENST00000558155 FAM57BQ71RH2 274 aa4.13□□□□□ -1.75
SPG11-208ENST00000558155 CBLL1Q75N03 491 aa4.13□□□□□ -1.75
SPG11-208ENST00000558155 ZDHHC23Q8IYP9 409 aa4.13□□□□□ -1.75
SPG11-208ENST00000558155 OSR2Q8N2R0 312 aa4.13□□□□□ -1.75
SPG11-208ENST00000558155 ARL6IP6Q8N6S5 226 aa4.13□□□□□ -1.75
SPG11-208ENST00000558155 PROKR2Q8NFJ6 384 aa4.13□□□□□ -1.75
SPG11-208ENST00000558155 NDNFQ8TB73 568 aa4.13□□□□□ -1.75
SPG11-208ENST00000558155 STON2Q8WXE9 905 aa4.13□□□□□ -1.75
SPG11-208ENST00000558155 PGAM5Q96HS1 289 aa4.13□□□□□ -1.75
SPG11-208ENST00000558155 OR52D1Q9H346 318 aa4.13□□□□□ -1.75
SPG11-208ENST00000558155 PPP1R3EQ9H7J1 279 aa4.13□□□□□ -1.75
SPG11-208ENST00000558155 ZMAT4Q9H898 229 aa4.13□□□□□ -1.75
SPG11-208ENST00000558155 LIN7BQ9HAP6 207 aa4.13□□□□□ -1.75
SPG11-208ENST00000558155 MRGBPQ9NV56 204 aa4.13□□□□□ -1.75
SPG11-208ENST00000558155 CD300AQ9UGN4 299 aa4.13□□□□□ -1.75
SPG11-208ENST00000558155 ZNF222Q9UK12 451 aa4.13□□□□□ -1.75
SPG11-208ENST00000558155 HILPDAQ9Y5L2 63 aa4.13□□□□□ -1.75
SPG11-208ENST00000558155 ENPP4Q9Y6X5 453 aa4.13□□□□□ -1.75
SPG11-208ENST00000558155 TENM2Q9NT68 2774 aa4.13□□□□□ -1.75
SPG11-208ENST00000558155 BBIP1A8MTZ0 92 aa4.12□□□□□ -1.75
SPG11-208ENST00000558155 FAM25EA8MYX2 175 aa4.12□□□□□ -1.75
SPG11-208ENST00000558155 ZNF732B4DXR9 585 aa4.12□□□□□ -1.75
SPG11-208ENST00000558155 M0QZK8 103 aa4.12□□□□□ -1.75
SPG11-208ENST00000558155 CXCR6O00574 342 aa4.12□□□□□ -1.75
SPG11-208ENST00000558155 MRASO14807 208 aa4.12□□□□□ -1.75
SPG11-208ENST00000558155 TK1P04183 234 aa4.12□□□□□ -1.75
SPG11-208ENST00000558155 PGA5P0DJD9 388 aa4.12□□□□□ -1.75
SPG11-208ENST00000558155 ZNF728P0DKX0 622 aa4.12□□□□□ -1.75
SPG11-208ENST00000558155 ANOS1P23352 680 aa4.12□□□□□ -1.75
SPG11-208ENST00000558155 HTR1DP28221 377 aa4.12□□□□□ -1.75
SPG11-208ENST00000558155 IFNGR2P38484 337 aa4.12□□□□□ -1.75
SPG11-208ENST00000558155 GPM6AP51674 278 aa4.12□□□□□ -1.75
SPG11-208ENST00000558155 BLVRAP53004 296 aa4.12□□□□□ -1.75
SPG11-208ENST00000558155 ZNF121P58317 390 aaPredicted RBP4.12□□□□□ -1.75
SPG11-208ENST00000558155 RPL23AP62750 156 aaKnown RBP4.12□□□□□ -1.75
SPG11-208ENST00000558155 GNG3P63215 75 aa4.12□□□□□ -1.75
SPG11-208ENST00000558155 EIF2B1Q14232 305 aaKnown RBP4.12□□□□□ -1.75
SPG11-208ENST00000558155 ZNF273Q14593 569 aa4.12□□□□□ -1.75
SPG11-208ENST00000558155 MAPRE2Q15555 327 aa4.12□□□□□ -1.75
SPG11-208ENST00000558155 GFOD2Q3B7J2 385 aa4.12□□□□□ -1.75
SPG11-208ENST00000558155 SMIM21Q3B7S5 101 aa4.12□□□□□ -1.75
SPG11-208ENST00000558155 KLHL12Q53G59 568 aa4.12□□□□□ -1.75
SPG11-208ENST00000558155 PLBD1Q6P4A8 553 aa4.12□□□□□ -1.75
SPG11-208ENST00000558155 C10orf99Q6UWK7 81 aa4.12□□□□□ -1.75
SPG11-208ENST00000558155 ETV3LQ6ZN32 361 aa4.12□□□□□ -1.75
SPG11-208ENST00000558155 ACP7Q6ZNF0 438 aa4.12□□□□□ -1.75
SPG11-208ENST00000558155 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.12□□□□□ -1.75
SPG11-208ENST00000558155 CD177Q8N6Q3 437 aa4.12□□□□□ -1.75
SPG11-208ENST00000558155 OR5A2Q8NGI9 324 aa4.12□□□□□ -1.75
SPG11-208ENST00000558155 OR51L1Q8NGJ5 315 aa4.12□□□□□ -1.75
SPG11-208ENST00000558155 OR52J3Q8NH60 311 aa4.12□□□□□ -1.75
SPG11-208ENST00000558155 FANK1Q8TC84 345 aa4.12□□□□□ -1.75
SPG11-208ENST00000558155 CHPT1Q8WUD6 406 aa4.12□□□□□ -1.75
SPG11-208ENST00000558155 DYDC1Q8WWB3 177 aa4.12□□□□□ -1.75
SPG11-208ENST00000558155 TLCD1Q96CP7 247 aa4.12□□□□□ -1.75
SPG11-208ENST00000558155 HSH2DQ96JZ2 352 aa4.12□□□□□ -1.75
SPG11-208ENST00000558155 RBM14Q96PK6 669 aaKnown RBP4.12□□□□□ -1.75
SPG11-208ENST00000558155 RCHY1Q96PM5 261 aa4.12□□□□□ -1.75
SPG11-208ENST00000558155 PRR25Q96S07 402 aa4.12□□□□□ -1.75
SPG11-208ENST00000558155 CDRT15Q96T59 188 aa4.12□□□□□ -1.75
SPG11-208ENST00000558155 P2RX4Q99571 388 aa4.12□□□□□ -1.75
SPG11-208ENST00000558155 SLC25A33Q9BSK2 321 aa4.12□□□□□ -1.75
SPG11-208ENST00000558155 PARD6BQ9BYG5 372 aa4.12□□□□□ -1.75
SPG11-208ENST00000558155 MYLK2Q9H1R3 596 aa4.12□□□□□ -1.75
SPG11-208ENST00000558155 OR51I2Q9H344 312 aa4.12□□□□□ -1.75
SPG11-208ENST00000558155 FN3KQ9H479 309 aa4.12□□□□□ -1.75
SPG11-208ENST00000558155 VIPAS39Q9H9C1 493 aa4.12□□□□□ -1.75
SPG11-208ENST00000558155 BRD7Q9NPI1 651 aa4.12□□□□□ -1.75
SPG11-208ENST00000558155 PAPOLBQ9NRJ5 636 aaKnown RBP4.12□□□□□ -1.75
SPG11-208ENST00000558155 GAR1Q9NY12 217 aaKnown RBP4.12□□□□□ -1.75
SPG11-208ENST00000558155 DPM3Q9P2X0 92 aa4.12□□□□□ -1.75
SPG11-208ENST00000558155 RABL2AQ9UBK7 228 aaPredicted RBP4.12□□□□□ -1.75
SPG11-208ENST00000558155 SMAD5-AS1Q9Y6J3 95 aa4.12□□□□□ -1.75
SPG11-208ENST00000558155 SORL1Q92673 2214 aa4.11□□□□□ -1.75
SPG11-208ENST00000558155 TRBV4-1A0A0J9YWV2 114 aa4.11□□□□□ -1.75
SPG11-208ENST00000558155 DHRS12A0PJE2 317 aa4.11□□□□□ -1.75
SPG11-208ENST00000558155 FXYD1O00168 92 aa4.11□□□□□ -1.75
SPG11-208ENST00000558155 CCL24O00175 119 aa4.11□□□□□ -1.75
SPG11-208ENST00000558155 DNAJC8O75937 253 aaPredicted RBP4.11□□□□□ -1.75
SPG11-208ENST00000558155 OR2F2O95006 317 aa4.11□□□□□ -1.75
SPG11-208ENST00000558155 SERPINA1P01009 418 aa4.11□□□□□ -1.75
SPG11-208ENST00000558155 H2BFMP0C1H6 154 aa4.11□□□□□ -1.75
SPG11-208ENST00000558155 IGHV1-8P0DP01 117 aa4.11□□□□□ -1.75
SPG11-208ENST00000558155 PIPP12273 146 aaPredicted RBP4.11□□□□□ -1.75
SPG11-208ENST00000558155 JUNBP17275 347 aaPredicted RBP4.11□□□□□ -1.75
SPG11-208ENST00000558155 VAMP1P23763 118 aa4.11□□□□□ -1.75
SPG11-208ENST00000558155 OR3A4PP47883 348 aa4.11□□□□□ -1.75
SPG11-208ENST00000558155 DLX6P56179 175 aa4.11□□□□□ -1.75
SPG11-208ENST00000558155 RAB25P57735 213 aa4.11□□□□□ -1.75
SPG11-208ENST00000558155 ACTA2P62736 377 aa4.11□□□□□ -1.75
SPG11-208ENST00000558155 ACTG2P63267 376 aa4.11□□□□□ -1.75
SPG11-208ENST00000558155 ACTC1P68032 377 aa4.11□□□□□ -1.75
SPG11-208ENST00000558155 ACTA1P68133 377 aa4.11□□□□□ -1.75
SPG11-208ENST00000558155 SLC35B1P78383 322 aa4.11□□□□□ -1.75
SPG11-208ENST00000558155 MEF2CQ06413 473 aaPredicted RBP4.11□□□□□ -1.75
SPG11-208ENST00000558155 CEACAM21Q3KPI0 293 aa4.11□□□□□ -1.75
SPG11-208ENST00000558155 LDLRAD2Q5SZI1 272 aa4.11□□□□□ -1.75
SPG11-208ENST00000558155 ZFAND6Q6FIF0 208 aa4.11□□□□□ -1.75
SPG11-208ENST00000558155 HAGHLQ6PII5 290 aaPredicted RBP4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms