RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 TSPAN2O60636 221 aa4.34□□□□□ -1.71
RTF1-204ENST00000558117 E2F6O75461 281 aa4.34□□□□□ -1.71
RTF1-204ENST00000558117 CSTAP01040 98 aa4.34□□□□□ -1.71
RTF1-204ENST00000558117 GSTT2P0CG29 244 aa4.34□□□□□ -1.71
RTF1-204ENST00000558117 GSTT2BP0CG30 244 aa4.34□□□□□ -1.71
RTF1-204ENST00000558117 TROVE2P10155 538 aaKnown RBP eCLIP4.34□□□□□ -1.71
RTF1-204ENST00000558117 NCK1P16333 377 aa4.34□□□□□ -1.71
RTF1-204ENST00000558117 IVDP26440 423 aa4.34□□□□□ -1.71
RTF1-204ENST00000558117 CD1BP29016 333 aa4.34□□□□□ -1.71
RTF1-204ENST00000558117 CALCRP30988 508 aa4.34□□□□□ -1.71
RTF1-204ENST00000558117 NUP62P37198 522 aaPredicted RBP4.34□□□□□ -1.71
RTF1-204ENST00000558117 PLA2G16P53816 162 aa4.34□□□□□ -1.71
RTF1-204ENST00000558117 BASP1P80723 227 aaKnown RBP4.34□□□□□ -1.71
RTF1-204ENST00000558117 NNATQ16517 81 aa4.34□□□□□ -1.71
RTF1-204ENST00000558117 HIGD2BQ4VC39 106 aa4.34□□□□□ -1.71
RTF1-204ENST00000558117 XKR7Q5GH72 579 aa4.34□□□□□ -1.71
RTF1-204ENST00000558117 BEND6Q5SZJ8 279 aaPredicted RBP4.34□□□□□ -1.71
RTF1-204ENST00000558117 METTL11BQ5VVY1 283 aa4.34□□□□□ -1.71
RTF1-204ENST00000558117 HBMQ6B0K9 141 aa4.34□□□□□ -1.71
RTF1-204ENST00000558117 REP15Q6BDI9 236 aa4.34□□□□□ -1.71
RTF1-204ENST00000558117 PTRHD1Q6GMV3 140 aaKnown RBP4.34□□□□□ -1.71
RTF1-204ENST00000558117 ST13P4Q8IZP2 240 aaPredicted RBP4.34□□□□□ -1.71
RTF1-204ENST00000558117 FBXO25Q8TCJ0 367 aa4.34□□□□□ -1.71
RTF1-204ENST00000558117 GPR148Q8TDV2 347 aa4.34□□□□□ -1.71
RTF1-204ENST00000558117 AENQ8WTP8 325 aaKnown RBP4.34□□□□□ -1.71
RTF1-204ENST00000558117 TFB1MQ8WVM0 346 aaKnown RBP4.34□□□□□ -1.71
RTF1-204ENST00000558117 DNAJA3Q96EY1 480 aa4.34□□□□□ -1.71
RTF1-204ENST00000558117 SNF8Q96H20 258 aa4.34□□□□□ -1.71
RTF1-204ENST00000558117 AMDHD1Q96NU7 426 aa4.34□□□□□ -1.71
RTF1-204ENST00000558117 QKIQ96PU8 341 aaKnown RBP eCLIP4.34□□□□□ -1.71
RTF1-204ENST00000558117 MAPKAP1Q9BPZ7 522 aa4.34□□□□□ -1.71
RTF1-204ENST00000558117 SRXN1Q9BYN0 137 aa4.34□□□□□ -1.71
RTF1-204ENST00000558117 DNTTIP1Q9H147 329 aa4.34□□□□□ -1.71
RTF1-204ENST00000558117 RHOJQ9H4E5 214 aa4.34□□□□□ -1.71
RTF1-204ENST00000558117 GEMIN7Q9H840 131 aaKnown RBP4.34□□□□□ -1.71
RTF1-204ENST00000558117 HEXA-AS1Q9H8Q6 139 aa4.34□□□□□ -1.71
RTF1-204ENST00000558117 SLC17A5Q9NRA2 495 aa4.34□□□□□ -1.71
RTF1-204ENST00000558117 INPP5EQ9NRR6 644 aa4.34□□□□□ -1.71
RTF1-204ENST00000558117 SLC2A8Q9NY64 477 aa4.34□□□□□ -1.71
RTF1-204ENST00000558117 MED11Q9P086 117 aa4.34□□□□□ -1.71
RTF1-204ENST00000558117 GALPQ9UBC7 116 aa4.34□□□□□ -1.71
RTF1-204ENST00000558117 RPH3ALQ9UNE2 315 aa4.34□□□□□ -1.71
RTF1-204ENST00000558117 FLG2Q5D862 2391 aaPredicted RBP4.33□□□□□ -1.72
RTF1-204ENST00000558117 TRAV25A0A0B4J276 109 aa4.33□□□□□ -1.72
RTF1-204ENST00000558117 LRIT2A6NDA9 550 aa4.33□□□□□ -1.72
RTF1-204ENST00000558117 OR6C70A6NIJ9 312 aa4.33□□□□□ -1.72
RTF1-204ENST00000558117 SMIM23A6NLE4 172 aa4.33□□□□□ -1.72
RTF1-204ENST00000558117 ZNF879B4DU55 563 aa4.33□□□□□ -1.72
RTF1-204ENST00000558117 C9JVG2 144 aa4.33□□□□□ -1.72
RTF1-204ENST00000558117 PDLIM1O00151 329 aa4.33□□□□□ -1.72
RTF1-204ENST00000558117 SH2D1BO14796 132 aa4.33□□□□□ -1.72
RTF1-204ENST00000558117 DEDDO75618 318 aa4.33□□□□□ -1.72
RTF1-204ENST00000558117 PIAS1O75925 651 aa4.33□□□□□ -1.72
RTF1-204ENST00000558117 ANXA9O76027 345 aa4.33□□□□□ -1.72
RTF1-204ENST00000558117 SCGNO76038 276 aa4.33□□□□□ -1.72
RTF1-204ENST00000558117 IGHV3-9P01782 118 aa4.33□□□□□ -1.72
RTF1-204ENST00000558117 RBMY1CP0DJD4 496 aa4.33□□□□□ -1.72
RTF1-204ENST00000558117 TGFBR2P37173 567 aa4.33□□□□□ -1.72
RTF1-204ENST00000558117 FDFT1P37268 417 aa4.33□□□□□ -1.72
RTF1-204ENST00000558117 HTR5AP47898 357 aa4.33□□□□□ -1.72
RTF1-204ENST00000558117 NDUFV3P56181 108 aaKnown RBP4.33□□□□□ -1.72
RTF1-204ENST00000558117 ABCE1P61221 599 aaKnown RBP4.33□□□□□ -1.72
RTF1-204ENST00000558117 STXBP1P61764 594 aaKnown RBP4.33□□□□□ -1.72
RTF1-204ENST00000558117 REEP5Q00765 189 aa4.33□□□□□ -1.72
RTF1-204ENST00000558117 PAX2Q02962 417 aa4.33□□□□□ -1.72
RTF1-204ENST00000558117 PLCXD2Q0VAA5 305 aa4.33□□□□□ -1.72
RTF1-204ENST00000558117 CDH17Q12864 832 aa4.33□□□□□ -1.72
RTF1-204ENST00000558117 BIKQ13323 160 aa4.33□□□□□ -1.72
RTF1-204ENST00000558117 CUL1Q13616 776 aa4.33□□□□□ -1.72
RTF1-204ENST00000558117 KLF5Q13887 457 aaPredicted RBP4.33□□□□□ -1.72
RTF1-204ENST00000558117 ALKBH6Q3KRA9 238 aa4.33□□□□□ -1.72
RTF1-204ENST00000558117 GGTA1PQ4G0N0 100 aa4.33□□□□□ -1.72
RTF1-204ENST00000558117 HIKESHIQ53FT3 197 aa4.33□□□□□ -1.72
RTF1-204ENST00000558117 C6orf226Q5I0X4 101 aa4.33□□□□□ -1.72
RTF1-204ENST00000558117 LGSNQ5TDP6 509 aa4.33□□□□□ -1.72
RTF1-204ENST00000558117 AGBL2Q5U5Z8 902 aa4.33□□□□□ -1.72
RTF1-204ENST00000558117 FBXW9Q5XUX1 488 aa4.33□□□□□ -1.72
RTF1-204ENST00000558117 ZNF562Q6V9R5 426 aa4.33□□□□□ -1.72
RTF1-204ENST00000558117 TBC1D19Q8N5T2 526 aa4.33□□□□□ -1.72
RTF1-204ENST00000558117 OR4C5Q8NGB2 326 aa4.33□□□□□ -1.72
RTF1-204ENST00000558117 OR4F15Q8NGB8 312 aa4.33□□□□□ -1.72
RTF1-204ENST00000558117 FAM81AQ8TBF8 368 aa4.33□□□□□ -1.72
RTF1-204ENST00000558117 ST8SIA1Q92185 356 aa4.33□□□□□ -1.72
RTF1-204ENST00000558117 LRRC45Q96CN5 670 aa4.33□□□□□ -1.72
RTF1-204ENST00000558117 PELI1Q96FA3 418 aa4.33□□□□□ -1.72
RTF1-204ENST00000558117 ATP6V1G3Q96LB4 118 aa4.33□□□□□ -1.72
RTF1-204ENST00000558117 SLC38A2Q96QD8 506 aa4.33□□□□□ -1.72
RTF1-204ENST00000558117 OR4K3Q96R72 315 aa4.33□□□□□ -1.72
RTF1-204ENST00000558117 CCDC28BQ9BUN5 200 aa4.33□□□□□ -1.72
RTF1-204ENST00000558117 FRMD8P1Q9BZ68 369 aaPredicted RBP4.33□□□□□ -1.72
RTF1-204ENST00000558117 ANKRA2Q9H9E1 313 aa4.33□□□□□ -1.72
RTF1-204ENST00000558117 LYRM4Q9HD34 91 aa4.33□□□□□ -1.72
RTF1-204ENST00000558117 KRTAP9-6A8MVA2 160 aa4.32□□□□□ -1.72
RTF1-204ENST00000558117 HACD1B0YJ81 288 aa4.32□□□□□ -1.72
RTF1-204ENST00000558117 ZNF487B1APH4 448 aa4.32□□□□□ -1.72
RTF1-204ENST00000558117 M0R233 179 aa4.32□□□□□ -1.72
RTF1-204ENST00000558117 IMPA2O14732 288 aa4.32□□□□□ -1.72
RTF1-204ENST00000558117 TNFSF12O43508 249 aa4.32□□□□□ -1.72
RTF1-204ENST00000558117 SRSF10O75494 262 aaKnown RBP4.32□□□□□ -1.72
RTF1-204ENST00000558117 SHBGP04278 402 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms