RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 RBFOX1Q9NWB1 397 aaKnown RBP17.44■□□□□ 0.38
SNRPA1-205ENST00000558036 PURGQ9UJV8 347 aaKnown RBP17.44■□□□□ 0.38
SNRPA1-205ENST00000558036 NKX2-6A6NCS4 301 aa17.43■□□□□ 0.38
SNRPA1-205ENST00000558036 C3orf80F5H4A9 247 aa17.43■□□□□ 0.38
SNRPA1-205ENST00000558036 TPPPO94811 219 aa17.43■□□□□ 0.38
SNRPA1-205ENST00000558036 PIGYQ3MUY2 71 aa17.43■□□□□ 0.38
SNRPA1-205ENST00000558036 ASCL4Q6XD76 172 aa17.43■□□□□ 0.38
SNRPA1-205ENST00000558036 CDH24Q86UP0 819 aa17.43■□□□□ 0.38
SNRPA1-205ENST00000558036 LRP11Q86VZ4 500 aa17.43■□□□□ 0.38
SNRPA1-205ENST00000558036 ENKURQ8TC29 256 aa17.43■□□□□ 0.38
SNRPA1-205ENST00000558036 NUDCD2Q8WVJ2 157 aa17.43■□□□□ 0.38
SNRPA1-205ENST00000558036 RAB3CQ96E17 227 aa17.43■□□□□ 0.38
SNRPA1-205ENST00000558036 ARHGAP5-AS1Q96IT6 56 aa17.43■□□□□ 0.38
SNRPA1-205ENST00000558036 ADAT1Q9BUB4 502 aaKnown RBP17.43■□□□□ 0.38
SNRPA1-205ENST00000558036 NLKQ9UBE8 527 aa17.43■□□□□ 0.38
SNRPA1-205ENST00000558036 KCNK7Q9Y2U2 307 aa17.43■□□□□ 0.38
SNRPA1-205ENST00000558036 F8VVB4 439 aa17.42■□□□□ 0.38
SNRPA1-205ENST00000558036 F8VWA3 439 aa17.42■□□□□ 0.38
SNRPA1-205ENST00000558036 H7C417 338 aa17.42■□□□□ 0.38
SNRPA1-205ENST00000558036 TIMM8AO60220 97 aaPredicted RBP17.42■□□□□ 0.38
SNRPA1-205ENST00000558036 SELEP16581 610 aa17.42■□□□□ 0.38
SNRPA1-205ENST00000558036 CD40P25942 277 aa17.42■□□□□ 0.38
SNRPA1-205ENST00000558036 ZNF718Q3SXZ3 478 aa17.42■□□□□ 0.38
SNRPA1-205ENST00000558036 MZT2BQ6NZ67 158 aa17.42■□□□□ 0.38
SNRPA1-205ENST00000558036 HAGHLQ6PII5 290 aaPredicted RBP17.42■□□□□ 0.38
SNRPA1-205ENST00000558036 PIAS4Q8N2W9 510 aaPredicted RBP17.42■□□□□ 0.38
SNRPA1-205ENST00000558036 OR56B1Q8NGI3 324 aa17.42■□□□□ 0.38
SNRPA1-205ENST00000558036 GPX8Q8TED1 209 aa17.42■□□□□ 0.38
SNRPA1-205ENST00000558036 MTFP1Q9UDX5 166 aa17.42■□□□□ 0.38
SNRPA1-205ENST00000558036 FAM240BA0A1B0GVZ2 78 aa17.42■□□□□ 0.38
SNRPA1-205ENST00000558036 SYNGR1O43759 233 aa17.42■□□□□ 0.38
SNRPA1-205ENST00000558036 RBBP9O75884 186 aa17.42■□□□□ 0.38
SNRPA1-205ENST00000558036 GTF2F2P13984 249 aa17.42■□□□□ 0.38
SNRPA1-205ENST00000558036 GCH1P30793 250 aa17.42■□□□□ 0.38
SNRPA1-205ENST00000558036 BTCP35070 178 aa17.42■□□□□ 0.38
SNRPA1-205ENST00000558036 RANBP1P43487 201 aa17.42■□□□□ 0.38
SNRPA1-205ENST00000558036 TAF9Q16594 264 aa17.42■□□□□ 0.38
SNRPA1-205ENST00000558036 PCGF3Q3KNV8 242 aa17.42■□□□□ 0.38
SNRPA1-205ENST00000558036 HACD4Q5VWC8 232 aa17.42■□□□□ 0.38
SNRPA1-205ENST00000558036 WDR86Q86TI4 376 aa17.42■□□□□ 0.38
SNRPA1-205ENST00000558036 FBXL14Q8N1E6 418 aa17.42■□□□□ 0.38
SNRPA1-205ENST00000558036 FAM89BQ8N5H3 189 aa17.42■□□□□ 0.38
SNRPA1-205ENST00000558036 PXT1Q8NFP0 134 aa17.42■□□□□ 0.38
SNRPA1-205ENST00000558036 Q96M66 194 aa17.42■□□□□ 0.38
SNRPA1-205ENST00000558036 WFIKKN1Q96NZ8 548 aa17.42■□□□□ 0.38
SNRPA1-205ENST00000558036 MSL2Q9HCI7 577 aa17.42■□□□□ 0.38
SNRPA1-205ENST00000558036 FAIMQ9NVQ4 179 aa17.42■□□□□ 0.38
SNRPA1-205ENST00000558036 DUSP13Q9UII6 198 aa17.42■□□□□ 0.38
SNRPA1-205ENST00000558036 CHRM2P08172 466 aa17.41■□□□□ 0.38
SNRPA1-205ENST00000558036 GRNP28799 593 aaKnown RBP17.41■□□□□ 0.38
SNRPA1-205ENST00000558036 BLVRBP30043 206 aaPredicted RBP17.41■□□□□ 0.38
SNRPA1-205ENST00000558036 CHRNB4P30926 498 aa17.41■□□□□ 0.38
SNRPA1-205ENST00000558036 GNG3P63215 75 aa17.41■□□□□ 0.38
SNRPA1-205ENST00000558036 PDCD1Q15116 288 aa17.41■□□□□ 0.38
SNRPA1-205ENST00000558036 C3orf36Q3SXR2 165 aa17.41■□□□□ 0.38
SNRPA1-205ENST00000558036 RGS7BPQ6MZT1 257 aaPredicted RBP17.41■□□□□ 0.38
SNRPA1-205ENST00000558036 ZNF488Q96MN9 340 aa17.41■□□□□ 0.38
SNRPA1-205ENST00000558036 HS3ST6Q96QI5 342 aa17.41■□□□□ 0.38
SNRPA1-205ENST00000558036 MTCH1Q9NZJ7 389 aa17.41■□□□□ 0.38
SNRPA1-205ENST00000558036 ANKRD20A5PA0PJZ0 165 aa17.41■□□□□ 0.38
SNRPA1-205ENST00000558036 MLNRO43193 412 aa17.41■□□□□ 0.38
SNRPA1-205ENST00000558036 LPLP06858 475 aa17.41■□□□□ 0.38
SNRPA1-205ENST00000558036 BCL3P20749 454 aa17.41■□□□□ 0.38
SNRPA1-205ENST00000558036 OR8G5Q8NG78 346 aa17.41■□□□□ 0.38
SNRPA1-205ENST00000558036 TM2D1Q9BX74 207 aa17.41■□□□□ 0.38
SNRPA1-205ENST00000558036 HEATR1Q9H583 2144 aaKnown RBP17.41■□□□□ 0.38
SNRPA1-205ENST00000558036 OR5B21A6NL26 309 aa17.4■□□□□ 0.38
SNRPA1-205ENST00000558036 GEMIN2O14893 280 aaKnown RBP17.4■□□□□ 0.38
SNRPA1-205ENST00000558036 SCGNO76038 276 aa17.4■□□□□ 0.38
SNRPA1-205ENST00000558036 HIST1H1DP16402 221 aaKnown RBP17.4■□□□□ 0.38
SNRPA1-205ENST00000558036 CPT2P23786 658 aa17.4■□□□□ 0.38
SNRPA1-205ENST00000558036 ASCL1P50553 236 aa17.4■□□□□ 0.38
SNRPA1-205ENST00000558036 CCR6P51684 374 aa17.4■□□□□ 0.38
SNRPA1-205ENST00000558036 SNU13P55769 128 aaKnown RBP17.4■□□□□ 0.38
SNRPA1-205ENST00000558036 NKX6-1P78426 367 aaPredicted RBP17.4■□□□□ 0.38
SNRPA1-205ENST00000558036 MBNL2Q5VZF2 373 aaKnown RBP17.4■□□□□ 0.38
SNRPA1-205ENST00000558036 Q6ZR03 302 aa17.4■□□□□ 0.38
SNRPA1-205ENST00000558036 OSR2Q8N2R0 312 aa17.4■□□□□ 0.38
SNRPA1-205ENST00000558036 PRR7Q8TB68 274 aa17.4■□□□□ 0.38
SNRPA1-205ENST00000558036 HRASLSQ9HDD0 168 aa17.4■□□□□ 0.38
SNRPA1-205ENST00000558036 TMEM100Q9NV29 134 aa17.4■□□□□ 0.38
SNRPA1-205ENST00000558036 COQ3Q9NZJ6 369 aa17.4■□□□□ 0.38
SNRPA1-205ENST00000558036 POU2F3Q9UKI9 436 aa17.4■□□□□ 0.38
SNRPA1-205ENST00000558036 FOXI3A8MTJ6 420 aaPredicted RBP17.39■□□□□ 0.38
SNRPA1-205ENST00000558036 ZNF780AO75290 641 aaPredicted RBP17.39■□□□□ 0.38
SNRPA1-205ENST00000558036 RHBDL1O75783 438 aa17.39■□□□□ 0.38
SNRPA1-205ENST00000558036 KITLGP21583 273 aa17.39■□□□□ 0.38
SNRPA1-205ENST00000558036 SLC6A1P30531 599 aa17.39■□□□□ 0.38
SNRPA1-205ENST00000558036 UQCRFS1P47985 274 aa17.39■□□□□ 0.38
SNRPA1-205ENST00000558036 OR8G1Q15617 311 aa17.39■□□□□ 0.38
SNRPA1-205ENST00000558036 NKAPLQ5M9Q1 402 aa17.39■□□□□ 0.38
SNRPA1-205ENST00000558036 C6orf201Q7Z4U5 140 aa17.39■□□□□ 0.38
SNRPA1-205ENST00000558036 GVQW1Q8N7I0 195 aa17.39■□□□□ 0.38
SNRPA1-205ENST00000558036 GTF3AQ92664 365 aaKnown RBP17.39■□□□□ 0.38
SNRPA1-205ENST00000558036 CNTNAP3BQ96NU0 1288 aa17.39■□□□□ 0.38
SNRPA1-205ENST00000558036 SYT3Q9BQG1 590 aa17.39■□□□□ 0.38
SNRPA1-205ENST00000558036 RTL8AQ9BWD3 113 aa17.39■□□□□ 0.38
SNRPA1-205ENST00000558036 CNTNAP3Q9BZ76 1288 aa17.39■□□□□ 0.38
SNRPA1-205ENST00000558036 OR51I2Q9H344 312 aa17.39■□□□□ 0.38
SNRPA1-205ENST00000558036 IL36RNQ9UBH0 155 aa17.39■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms