RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 SF3B6Q9Y3B4 125 aaKnown RBP11.97□□□□□ -0.49
SHMT2-235ENST00000557740 MAB21L2Q9Y586 359 aa11.97□□□□□ -0.49
SHMT2-235ENST00000557740 NOTCH1P46531 2555 aa11.96□□□□□ -0.49
SHMT2-235ENST00000557740 A0A1W2PPH5 198 aa11.96□□□□□ -0.49
SHMT2-235ENST00000557740 RFPL4AA6NLU0 287 aa11.96□□□□□ -0.49
SHMT2-235ENST00000557740 ZNF670-ZNF695F2Z2N8 137 aa11.96□□□□□ -0.49
SHMT2-235ENST00000557740 RFPL4AL1F8VTS6 287 aa11.96□□□□□ -0.49
SHMT2-235ENST00000557740 J3QT63 122 aa11.96□□□□□ -0.49
SHMT2-235ENST00000557740 NXPH2O95156 264 aa11.96□□□□□ -0.49
SHMT2-235ENST00000557740 IGLV3-1P01715 115 aa11.96□□□□□ -0.49
SHMT2-235ENST00000557740 TTRP02766 147 aa11.96□□□□□ -0.49
SHMT2-235ENST00000557740 NXNL2Q5VZ03 156 aa11.96□□□□□ -0.49
SHMT2-235ENST00000557740 ASPHD2Q6ICH7 369 aa11.96□□□□□ -0.49
SHMT2-235ENST00000557740 MEPCEQ7L2J0 689 aaKnown RBP11.96□□□□□ -0.49
SHMT2-235ENST00000557740 BCDIN3DQ7Z5W3 292 aaKnown RBP11.96□□□□□ -0.49
SHMT2-235ENST00000557740 BEND2Q8NDZ0 799 aa11.96□□□□□ -0.49
SHMT2-235ENST00000557740 OR51G2Q8NGK0 314 aa11.96□□□□□ -0.49
SHMT2-235ENST00000557740 TMEM163Q8TC26 289 aa11.96□□□□□ -0.49
SHMT2-235ENST00000557740 BCAS4Q8TDM0 211 aa11.96□□□□□ -0.49
SHMT2-235ENST00000557740 PPP1R14AQ96A00 147 aa11.96□□□□□ -0.49
SHMT2-235ENST00000557740 SLC7A6OSQ96CW6 309 aaPredicted RBP11.96□□□□□ -0.49
SHMT2-235ENST00000557740 ZNF488Q96MN9 340 aa11.96□□□□□ -0.49
SHMT2-235ENST00000557740 APOL4Q9BPW4 351 aa11.96□□□□□ -0.49
SHMT2-235ENST00000557740 RBM4BQ9BQ04 359 aaKnown RBP11.96□□□□□ -0.49
SHMT2-235ENST00000557740 PPA2Q9H2U2 334 aa11.96□□□□□ -0.49
SHMT2-235ENST00000557740 GPR173Q9NS66 373 aa11.96□□□□□ -0.49
SHMT2-235ENST00000557740 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.96□□□□□ -0.49
SHMT2-235ENST00000557740 R4GMQ9 66 aa11.96□□□□□ -0.49
SHMT2-235ENST00000557740 H3BUX3 64 aa11.95□□□□□ -0.5
SHMT2-235ENST00000557740 MITFO75030 526 aaPredicted RBP11.95□□□□□ -0.5
SHMT2-235ENST00000557740 SRSF10O75494 262 aaKnown RBP11.95□□□□□ -0.5
SHMT2-235ENST00000557740 TSPAN9O75954 239 aa11.95□□□□□ -0.5
SHMT2-235ENST00000557740 RPL31P62899 125 aaKnown RBP11.95□□□□□ -0.5
SHMT2-235ENST00000557740 SLX4IPQ5VYV7 408 aa11.95□□□□□ -0.5
SHMT2-235ENST00000557740 ASRGL1Q7L266 308 aa11.95□□□□□ -0.5
SHMT2-235ENST00000557740 GID4Q8IVV7 300 aa11.95□□□□□ -0.5
SHMT2-235ENST00000557740 ELMOD2Q8IZ81 293 aa11.95□□□□□ -0.5
SHMT2-235ENST00000557740 ZNF561Q8N587 486 aa11.95□□□□□ -0.5
SHMT2-235ENST00000557740 CD177Q8N6Q3 437 aa11.95□□□□□ -0.5
SHMT2-235ENST00000557740 TCEANCQ8N8B7 351 aa11.95□□□□□ -0.5
SHMT2-235ENST00000557740 UTP4Q969X6 686 aaKnown RBP11.95□□□□□ -0.5
SHMT2-235ENST00000557740 FAM234AQ9H0X4 552 aa11.95□□□□□ -0.5
SHMT2-235ENST00000557740 ADGRL4Q9HBW9 690 aa11.95□□□□□ -0.5
SHMT2-235ENST00000557740 C19orf12Q9NSK7 152 aa11.95□□□□□ -0.5
SHMT2-235ENST00000557740 CLN6Q9NWW5 311 aa11.95□□□□□ -0.5
SHMT2-235ENST00000557740 ENOPH1Q9UHY7 261 aa11.95□□□□□ -0.5
SHMT2-235ENST00000557740 OR52A1Q9UKL2 312 aa11.95□□□□□ -0.5
SHMT2-235ENST00000557740 hCG_1809904A0A1W2PP81 198 aa11.94□□□□□ -0.5
SHMT2-235ENST00000557740 A0A1W2PPE2 198 aa11.94□□□□□ -0.5
SHMT2-235ENST00000557740 A0A1W2PR64 198 aa11.94□□□□□ -0.5
SHMT2-235ENST00000557740 A0A1W2PRV1 198 aa11.94□□□□□ -0.5
SHMT2-235ENST00000557740 PQLC2LA1A4F0 135 aa11.94□□□□□ -0.5
SHMT2-235ENST00000557740 DLGAP1O14490 977 aa11.94□□□□□ -0.5
SHMT2-235ENST00000557740 MAGEB4O15481 346 aaPredicted RBP11.94□□□□□ -0.5
SHMT2-235ENST00000557740 SYNGR1O43759 233 aa11.94□□□□□ -0.5
SHMT2-235ENST00000557740 PGA5P0DJD9 388 aa11.94□□□□□ -0.5
SHMT2-235ENST00000557740 GABRA5P31644 462 aa11.94□□□□□ -0.5
SHMT2-235ENST00000557740 PRDX2P32119 198 aa11.94□□□□□ -0.5
SHMT2-235ENST00000557740 EGR3Q06889 387 aa11.94□□□□□ -0.5
SHMT2-235ENST00000557740 ATP6AP1Q15904 470 aa11.94□□□□□ -0.5
SHMT2-235ENST00000557740 C2orf68Q2NKX9 166 aa11.94□□□□□ -0.5
SHMT2-235ENST00000557740 HCP5Q6MZN7 132 aa11.94□□□□□ -0.5
SHMT2-235ENST00000557740 PLEKHG7Q6ZR37 379 aa11.94□□□□□ -0.5
SHMT2-235ENST00000557740 MKXQ8IYA7 352 aa11.94□□□□□ -0.5
SHMT2-235ENST00000557740 IL4I1Q96RQ9 567 aa11.94□□□□□ -0.5
SHMT2-235ENST00000557740 HEXA-AS1Q9H8Q6 139 aa11.94□□□□□ -0.5
SHMT2-235ENST00000557740 PLEKHA1Q9HB21 404 aa11.94□□□□□ -0.5
SHMT2-235ENST00000557740 OR14J1Q9UGF5 321 aa11.94□□□□□ -0.5
SHMT2-235ENST00000557740 SNX5Q9Y5X3 404 aa11.94□□□□□ -0.5
SHMT2-235ENST00000557740 V9GYS6 101 aa11.94□□□□□ -0.5
SHMT2-235ENST00000557740 DHRS7CA6NNS2 312 aa11.93□□□□□ -0.5
SHMT2-235ENST00000557740 ZAR1LA6NP61 321 aa11.93□□□□□ -0.5
SHMT2-235ENST00000557740 G3V2T6 193 aa11.93□□□□□ -0.5
SHMT2-235ENST00000557740 NOS1APO75052 506 aaPredicted RBP11.93□□□□□ -0.5
SHMT2-235ENST00000557740 KRT8P05787 483 aa11.93□□□□□ -0.5
SHMT2-235ENST00000557740 CEBPDP49716 269 aaPredicted RBP11.93□□□□□ -0.5
SHMT2-235ENST00000557740 LY6EQ16553 131 aa11.93□□□□□ -0.5
SHMT2-235ENST00000557740 LRRC75BQ2VPJ9 315 aa11.93□□□□□ -0.5
SHMT2-235ENST00000557740 AADACL4Q5VUY2 407 aa11.93□□□□□ -0.5
SHMT2-235ENST00000557740 TMEM42Q69YG0 159 aa11.93□□□□□ -0.5
SHMT2-235ENST00000557740 C12orf73Q69YU5 71 aa11.93□□□□□ -0.5
SHMT2-235ENST00000557740 ZDHHC13Q8IUH4 622 aa11.93□□□□□ -0.5
SHMT2-235ENST00000557740 YIPF7Q8N8F6 280 aa11.93□□□□□ -0.5
SHMT2-235ENST00000557740 OR4C13Q8NGP0 309 aa11.93□□□□□ -0.5
SHMT2-235ENST00000557740 C17orf50Q8WW18 174 aa11.93□□□□□ -0.5
SHMT2-235ENST00000557740 TBX5Q99593 518 aa11.93□□□□□ -0.5
SHMT2-235ENST00000557740 SSX3Q99909 188 aa11.93□□□□□ -0.5
SHMT2-235ENST00000557740 NRIP2Q9BQI9 281 aa11.93□□□□□ -0.5
SHMT2-235ENST00000557740 CADM1Q9BY67 442 aaKnown RBP11.93□□□□□ -0.5
SHMT2-235ENST00000557740 USE1Q9NZ43 259 aa11.93□□□□□ -0.5
SHMT2-235ENST00000557740 MRM2Q9UI43 246 aaKnown RBP11.93□□□□□ -0.5
SHMT2-235ENST00000557740 A0A1B0GTI1 187 aa11.92□□□□□ -0.5
SHMT2-235ENST00000557740 DYNC1I1O14576 645 aa11.92□□□□□ -0.5
SHMT2-235ENST00000557740 RPP14O95059 124 aaKnown RBP11.92□□□□□ -0.5
SHMT2-235ENST00000557740 TSPAN15O95858 294 aa11.92□□□□□ -0.5
SHMT2-235ENST00000557740 COX7A1P24310 79 aa11.92□□□□□ -0.5
SHMT2-235ENST00000557740 MPZP25189 248 aa11.92□□□□□ -0.5
SHMT2-235ENST00000557740 FASP25445 335 aa11.92□□□□□ -0.5
SHMT2-235ENST00000557740 EPHA2P29317 976 aa11.92□□□□□ -0.5
SHMT2-235ENST00000557740 LGALS4P56470 323 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms