RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 XRCC3O43542 346 aa7.18□□□□□ -1.26
NEDD1-211ENST00000557454 XRCC2O43543 280 aa7.18□□□□□ -1.26
NEDD1-211ENST00000557454 MMP23AO75900 390 aa7.18□□□□□ -1.26
NEDD1-211ENST00000557454 TMEM11P17152 192 aa7.18□□□□□ -1.26
NEDD1-211ENST00000557454 PRDX2P32119 198 aa7.18□□□□□ -1.26
NEDD1-211ENST00000557454 EDDM3BP56851 147 aa7.18□□□□□ -1.26
NEDD1-211ENST00000557454 BDH1Q02338 343 aa7.18□□□□□ -1.26
NEDD1-211ENST00000557454 HES1Q14469 280 aa7.18□□□□□ -1.26
NEDD1-211ENST00000557454 HNF4GQ14541 408 aa7.18□□□□□ -1.26
NEDD1-211ENST00000557454 DRAM2Q6UX65 266 aa7.18□□□□□ -1.26
NEDD1-211ENST00000557454 MSANTD1Q6ZTZ1 278 aa7.18□□□□□ -1.26
NEDD1-211ENST00000557454 PTCHD4Q6ZW05 846 aa7.18□□□□□ -1.26
NEDD1-211ENST00000557454 PATL1Q86TB9 770 aaKnown RBP7.18□□□□□ -1.26
NEDD1-211ENST00000557454 OAFQ86UD1 273 aa7.18□□□□□ -1.26
NEDD1-211ENST00000557454 GTSCR1Q86UQ5 136 aa7.18□□□□□ -1.26
NEDD1-211ENST00000557454 ZDHHC23Q8IYP9 409 aa7.18□□□□□ -1.26
NEDD1-211ENST00000557454 OR2AJ1Q8NGZ0 328 aa7.18□□□□□ -1.26
NEDD1-211ENST00000557454 OR56B4Q8NH76 319 aa7.18□□□□□ -1.26
NEDD1-211ENST00000557454 HPSE2Q8WWQ2 592 aa7.18□□□□□ -1.26
NEDD1-211ENST00000557454 OR5P3Q8WZ94 311 aa7.18□□□□□ -1.26
NEDD1-211ENST00000557454 ITFG2Q969R8 447 aa7.18□□□□□ -1.26
NEDD1-211ENST00000557454 OR8B4Q96RC9 309 aa7.18□□□□□ -1.26
NEDD1-211ENST00000557454 RSRP1Q9BUV0 290 aa7.18□□□□□ -1.26
NEDD1-211ENST00000557454 PARD6BQ9BYG5 372 aa7.18□□□□□ -1.26
NEDD1-211ENST00000557454 IKZF5Q9H5V7 419 aa7.18□□□□□ -1.26
NEDD1-211ENST00000557454 NMNAT1Q9HAN9 279 aaPredicted RBP7.18□□□□□ -1.26
NEDD1-211ENST00000557454 PLEKHA3Q9HB20 300 aa7.18□□□□□ -1.26
NEDD1-211ENST00000557454 CYB5R1Q9UHQ9 305 aa7.18□□□□□ -1.26
NEDD1-211ENST00000557454 GLS2Q9UI32 602 aa7.18□□□□□ -1.26
NEDD1-211ENST00000557454 A0A0J9YWU9 116 aa7.17□□□□□ -1.26
NEDD1-211ENST00000557454 hCG_38984A0A1B0GV85 526 aa7.17□□□□□ -1.26
NEDD1-211ENST00000557454 FAM90A18PA6NE21 464 aa7.17□□□□□ -1.26
NEDD1-211ENST00000557454 FAM90A16PA6NEW6 464 aa7.17□□□□□ -1.26
NEDD1-211ENST00000557454 FAM90A20PA6NIJ5 464 aa7.17□□□□□ -1.26
NEDD1-211ENST00000557454 SMIM23A6NLE4 172 aa7.17□□□□□ -1.26
NEDD1-211ENST00000557454 FAM90A9PA6NNJ1 464 aa7.17□□□□□ -1.26
NEDD1-211ENST00000557454 ZNF850A8MQ14 1090 aa7.17□□□□□ -1.26
NEDD1-211ENST00000557454 FAM90A12PA8MX19 464 aa7.17□□□□□ -1.26
NEDD1-211ENST00000557454 FAM90A5PA8MXJ8 464 aa7.17□□□□□ -1.26
NEDD1-211ENST00000557454 M0QX08 132 aa7.17□□□□□ -1.26
NEDD1-211ENST00000557454 RTL8CO15255 209 aa7.17□□□□□ -1.26
NEDD1-211ENST00000557454 TBX1O43435 398 aa7.17□□□□□ -1.26
NEDD1-211ENST00000557454 TYROBPO43914 113 aa7.17□□□□□ -1.26
NEDD1-211ENST00000557454 CDK2AP2O75956 126 aa7.17□□□□□ -1.26
NEDD1-211ENST00000557454 FAM90A15PP0C7V4 464 aa7.17□□□□□ -1.26
NEDD1-211ENST00000557454 FAM90A13PP0C7W8 464 aa7.17□□□□□ -1.26
NEDD1-211ENST00000557454 FAM90A14PP0C7W9 464 aa7.17□□□□□ -1.26
NEDD1-211ENST00000557454 FAM90A24PP0C7X0 464 aa7.17□□□□□ -1.26
NEDD1-211ENST00000557454 LORP23490 312 aaPredicted RBP7.17□□□□□ -1.26
NEDD1-211ENST00000557454 OTX1P32242 354 aaPredicted RBP7.17□□□□□ -1.26
NEDD1-211ENST00000557454 MNDAP41218 407 aa7.17□□□□□ -1.26
NEDD1-211ENST00000557454 PRKXP51817 358 aa7.17□□□□□ -1.26
NEDD1-211ENST00000557454 ESRRGP62508 458 aa7.17□□□□□ -1.26
NEDD1-211ENST00000557454 PRDX4Q13162 271 aa7.17□□□□□ -1.26
NEDD1-211ENST00000557454 PIN1Q13526 163 aaPredicted RBP7.17□□□□□ -1.26
NEDD1-211ENST00000557454 KIAA0141Q14154 515 aaPredicted RBP7.17□□□□□ -1.26
NEDD1-211ENST00000557454 SMIM21Q3B7S5 101 aa7.17□□□□□ -1.26
NEDD1-211ENST00000557454 KLHL12Q53G59 568 aa7.17□□□□□ -1.26
NEDD1-211ENST00000557454 FAM76BQ5HYJ3 339 aa7.17□□□□□ -1.26
NEDD1-211ENST00000557454 CCDC80Q76M96 950 aa7.17□□□□□ -1.26
NEDD1-211ENST00000557454 ANKRD13BQ86YJ7 626 aa7.17□□□□□ -1.26
NEDD1-211ENST00000557454 ABHD12Q8N2K0 398 aa7.17□□□□□ -1.26
NEDD1-211ENST00000557454 ZNF491Q8N8L2 437 aa7.17□□□□□ -1.26
NEDD1-211ENST00000557454 OR9I1Q8NGQ6 314 aa7.17□□□□□ -1.26
NEDD1-211ENST00000557454 REEP6Q96HR9 211 aa7.17□□□□□ -1.26
NEDD1-211ENST00000557454 APOPT1Q96IL0 206 aa7.17□□□□□ -1.26
NEDD1-211ENST00000557454 RNF170Q96K19 258 aa7.17□□□□□ -1.26
NEDD1-211ENST00000557454 UBE2E2Q96LR5 201 aa7.17□□□□□ -1.26
NEDD1-211ENST00000557454 ZNF488Q96MN9 340 aa7.17□□□□□ -1.26
NEDD1-211ENST00000557454 THAP7Q9BT49 309 aaPredicted RBP7.17□□□□□ -1.26
NEDD1-211ENST00000557454 KLK15Q9H2R5 256 aa7.17□□□□□ -1.26
NEDD1-211ENST00000557454 OR51J1Q9H342 316 aa7.17□□□□□ -1.26
NEDD1-211ENST00000557454 SCRT2Q9NQ03 307 aa7.17□□□□□ -1.26
NEDD1-211ENST00000557454 NDE1Q9NXR1 346 aa7.17□□□□□ -1.26
NEDD1-211ENST00000557454 DNAJB9Q9UBS3 223 aa7.17□□□□□ -1.26
NEDD1-211ENST00000557454 RIMS3Q9UJD0 308 aa7.17□□□□□ -1.26
NEDD1-211ENST00000557454 STUB1Q9UNE7 303 aa7.17□□□□□ -1.26
NEDD1-211ENST00000557454 VSIG4Q9Y279 399 aa7.17□□□□□ -1.26
NEDD1-211ENST00000557454 HMCN2Q8NDA2 5059 aa7.17□□□□□ -1.26
NEDD1-211ENST00000557454 SHISA3A0PJX4 238 aa7.16□□□□□ -1.26
NEDD1-211ENST00000557454 ARRDC5A6NEK1 342 aa7.16□□□□□ -1.26
NEDD1-211ENST00000557454 EFCAB9A8MZ26 197 aa7.16□□□□□ -1.26
NEDD1-211ENST00000557454 LINC01619G3V211 115 aa7.16□□□□□ -1.26
NEDD1-211ENST00000557454 SOCS2O14508 198 aa7.16□□□□□ -1.26
NEDD1-211ENST00000557454 CNIH1O95406 144 aa7.16□□□□□ -1.26
NEDD1-211ENST00000557454 SERPINA1P01009 418 aa7.16□□□□□ -1.26
NEDD1-211ENST00000557454 IGLV1-47P01700 117 aa7.16□□□□□ -1.26
NEDD1-211ENST00000557454 GSTP1P09211 210 aaKnown RBP7.16□□□□□ -1.26
NEDD1-211ENST00000557454 RBMY1A1P0DJD3 496 aaKnown RBP7.16□□□□□ -1.26
NEDD1-211ENST00000557454 TNFRSF1BP20333 461 aa7.16□□□□□ -1.26
NEDD1-211ENST00000557454 VDAC1P21796 283 aa7.16□□□□□ -1.26
NEDD1-211ENST00000557454 OR1E2P47887 323 aa7.16□□□□□ -1.26
NEDD1-211ENST00000557454 GSK3AP49840 483 aa7.16□□□□□ -1.26
NEDD1-211ENST00000557454 GPM6AP51674 278 aa7.16□□□□□ -1.26
NEDD1-211ENST00000557454 CBX1P83916 185 aa7.16□□□□□ -1.26
NEDD1-211ENST00000557454 TIGD6Q17RP2 521 aa7.16□□□□□ -1.26
NEDD1-211ENST00000557454 KRT71Q3SY84 523 aa7.16□□□□□ -1.26
NEDD1-211ENST00000557454 CCDC144NLQ6NUI1 221 aa7.16□□□□□ -1.26
NEDD1-211ENST00000557454 TRMT10CQ7L0Y3 403 aaKnown RBP7.16□□□□□ -1.26
NEDD1-211ENST00000557454 THNSL2Q86YJ6 484 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms