RNA–Protein interactions for RNA: ENST00000557311.5

ATXN3-247, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-247ENST00000557311 SPATA46Q5T0L3 261 aa4.16□□□□□ -1.74
ATXN3-247ENST00000557311 ACSM2BQ68CK6 577 aa4.16□□□□□ -1.74
ATXN3-247ENST00000557311 PGBD2Q6P3X8 592 aa4.16□□□□□ -1.74
ATXN3-247ENST00000557311 TRAT1Q6PIZ9 186 aa4.16□□□□□ -1.74
ATXN3-247ENST00000557311 SSX7Q7RTT5 188 aa4.16□□□□□ -1.74
ATXN3-247ENST00000557311 RANBP3LQ86VV4 465 aaPredicted RBP4.16□□□□□ -1.74
ATXN3-247ENST00000557311 BPIFB2Q8N4F0 458 aa4.16□□□□□ -1.74
ATXN3-247ENST00000557311 ZDHHC22Q8N966 263 aa4.16□□□□□ -1.74
ATXN3-247ENST00000557311 CDRT4Q8N9R6 151 aa4.16□□□□□ -1.74
ATXN3-247ENST00000557311 OR4F15Q8NGB8 312 aa4.16□□□□□ -1.74
ATXN3-247ENST00000557311 OR5M8Q8NGP6 311 aa4.16□□□□□ -1.74
ATXN3-247ENST00000557311 OR4Q3Q8NH05 313 aa4.16□□□□□ -1.74
ATXN3-247ENST00000557311 OR51F2Q8NH61 342 aa4.16□□□□□ -1.74
ATXN3-247ENST00000557311 TERB2Q8NHR7 220 aa4.16□□□□□ -1.74
ATXN3-247ENST00000557311 PPP1R35Q8TAP8 253 aa4.16□□□□□ -1.74
ATXN3-247ENST00000557311 GPR119Q8TDV5 335 aa4.16□□□□□ -1.74
ATXN3-247ENST00000557311 C2CD4CQ8TF44 421 aa4.16□□□□□ -1.74
ATXN3-247ENST00000557311 ACOT11Q8WXI4 607 aaPredicted RBP4.16□□□□□ -1.74
ATXN3-247ENST00000557311 CDS1Q92903 461 aa4.16□□□□□ -1.74
ATXN3-247ENST00000557311 SPSB4Q96A44 273 aa4.16□□□□□ -1.74
ATXN3-247ENST00000557311 OTUB1Q96FW1 271 aaPredicted RBP4.16□□□□□ -1.74
ATXN3-247ENST00000557311 AMDHD1Q96NU7 426 aa4.16□□□□□ -1.74
ATXN3-247ENST00000557311 GPR78Q96P69 363 aa4.16□□□□□ -1.74
ATXN3-247ENST00000557311 FYTTD1Q96QD9 318 aaKnown RBP4.16□□□□□ -1.74
ATXN3-247ENST00000557311 OR5B2Q96R09 309 aa4.16□□□□□ -1.74
ATXN3-247ENST00000557311 KLHDC3Q9BQ90 382 aa4.16□□□□□ -1.74
ATXN3-247ENST00000557311 EBF4Q9BQW3 602 aa4.16□□□□□ -1.74
ATXN3-247ENST00000557311 NDUFAF3Q9BU61 184 aa4.16□□□□□ -1.74
ATXN3-247ENST00000557311 NXF2Q9GZY0 626 aaKnown RBP4.16□□□□□ -1.74
ATXN3-247ENST00000557311 DCSTAMPQ9H295 470 aa4.16□□□□□ -1.74
ATXN3-247ENST00000557311 NMNAT1Q9HAN9 279 aaPredicted RBP4.16□□□□□ -1.74
ATXN3-247ENST00000557311 OBP2BQ9NPH6 170 aa4.16□□□□□ -1.74
ATXN3-247ENST00000557311 SLC52A3Q9NQ40 469 aa4.16□□□□□ -1.74
ATXN3-247ENST00000557311 FAM118AQ9NWS6 357 aa4.16□□□□□ -1.74
ATXN3-247ENST00000557311 PDP1Q9P0J1 537 aaPredicted RBP4.16□□□□□ -1.74
ATXN3-247ENST00000557311 UPB1Q9UBR1 384 aa4.16□□□□□ -1.74
ATXN3-247ENST00000557311 PEF1Q9UBV8 284 aaKnown RBP4.16□□□□□ -1.74
ATXN3-247ENST00000557311 NUFIP1Q9UHK0 495 aaKnown RBP4.16□□□□□ -1.74
ATXN3-247ENST00000557311 ZDHHC2Q9UIJ5 367 aa4.16□□□□□ -1.74
ATXN3-247ENST00000557311 RIMS3Q9UJD0 308 aa4.16□□□□□ -1.74
ATXN3-247ENST00000557311 PCTPQ9UKL6 214 aa4.16□□□□□ -1.74
ATXN3-247ENST00000557311 ICAM5Q9UMF0 924 aa4.16□□□□□ -1.74
ATXN3-247ENST00000557311 PPP1R3CQ9UQK1 317 aa4.16□□□□□ -1.74
ATXN3-247ENST00000557311 POMPQ9Y244 141 aa4.16□□□□□ -1.74
ATXN3-247ENST00000557311 PTGDR2Q9Y5Y4 395 aa4.16□□□□□ -1.74
ATXN3-247ENST00000557311 A3GALT2U3KPV4 340 aa4.16□□□□□ -1.74
ATXN3-247ENST00000557311 MALRD1Q5VYJ5 2156 aa4.16□□□□□ -1.74
ATXN3-247ENST00000557311 DYSFO75923 2080 aa4.15□□□□□ -1.74
ATXN3-247ENST00000557311 A0A096LPK6 155 aa4.15□□□□□ -1.75
ATXN3-247ENST00000557311 FABP12A6NFH5 140 aa4.15□□□□□ -1.75
ATXN3-247ENST00000557311 PRSS29PA6NIE9 313 aa4.15□□□□□ -1.75
ATXN3-247ENST00000557311 FAM74A7A6NL05 159 aa4.15□□□□□ -1.75
ATXN3-247ENST00000557311 LINC00473A8K010 186 aa4.15□□□□□ -1.75
ATXN3-247ENST00000557311 K7EP13 123 aa4.15□□□□□ -1.75
ATXN3-247ENST00000557311 SULT2B1O00204 365 aa4.15□□□□□ -1.75
ATXN3-247ENST00000557311 PDCD5O14737 125 aa4.15□□□□□ -1.75
ATXN3-247ENST00000557311 GLRA3O75311 464 aa4.15□□□□□ -1.75
ATXN3-247ENST00000557311 CH25HO95992 272 aa4.15□□□□□ -1.75
ATXN3-247ENST00000557311 IGLV2-14P01704 120 aa4.15□□□□□ -1.75
ATXN3-247ENST00000557311 TFP02787 698 aa4.15□□□□□ -1.75
ATXN3-247ENST00000557311 GPIP06744 558 aa4.15□□□□□ -1.75
ATXN3-247ENST00000557311 ITGA5P08648 1049 aa4.15□□□□□ -1.75
ATXN3-247ENST00000557311 ANXA4P09525 319 aaPredicted RBP4.15□□□□□ -1.75
ATXN3-247ENST00000557311 MSR1P21757 451 aa4.15□□□□□ -1.75
ATXN3-247ENST00000557311 UQCRC2P22695 453 aa4.15□□□□□ -1.75
ATXN3-247ENST00000557311 TNFSF4P23510 183 aa4.15□□□□□ -1.75
ATXN3-247ENST00000557311 MYL9P24844 172 aa4.15□□□□□ -1.75
ATXN3-247ENST00000557311 FKBP2P26885 142 aaKnown RBP4.15□□□□□ -1.75
ATXN3-247ENST00000557311 MPGP29372 298 aa4.15□□□□□ -1.75
ATXN3-247ENST00000557311 C21orf33P30042 268 aaPredicted RBP4.15□□□□□ -1.75
ATXN3-247ENST00000557311 NTSP30990 170 aa4.15□□□□□ -1.75
ATXN3-247ENST00000557311 TIA1P31483 386 aaKnown RBP eCLIP4.15□□□□□ -1.75
ATXN3-247ENST00000557311 GPR6P46095 362 aaPredicted RBP4.15□□□□□ -1.75
ATXN3-247ENST00000557311 RORCP51449 518 aa4.15□□□□□ -1.75
ATXN3-247ENST00000557311 FOXG1P55316 489 aaPredicted RBP4.15□□□□□ -1.75
ATXN3-247ENST00000557311 ZNF117Q03924 483 aa4.15□□□□□ -1.75
ATXN3-247ENST00000557311 FABP9Q0Z7S8 132 aa4.15□□□□□ -1.75
ATXN3-247ENST00000557311 CD226Q15762 336 aa4.15□□□□□ -1.75
ATXN3-247ENST00000557311 C5orf64Q2M2E5 130 aa4.15□□□□□ -1.75
ATXN3-247ENST00000557311 FAM74A3Q4VXF1 159 aa4.15□□□□□ -1.75
ATXN3-247ENST00000557311 SPANXN2Q5MJ10 180 aa4.15□□□□□ -1.75
ATXN3-247ENST00000557311 RBM48Q5RL73 367 aaKnown RBP4.15□□□□□ -1.75
ATXN3-247ENST00000557311 TRIQKQ629K1 86 aa4.15□□□□□ -1.75
ATXN3-247ENST00000557311 FAM71E1Q6IPT2 247 aa4.15□□□□□ -1.75
ATXN3-247ENST00000557311 RGS7BPQ6MZT1 257 aaPredicted RBP4.15□□□□□ -1.75
ATXN3-247ENST00000557311 ANKRD16Q6P6B7 361 aa4.15□□□□□ -1.75
ATXN3-247ENST00000557311 CBLN3Q6UW01 205 aa4.15□□□□□ -1.75
ATXN3-247ENST00000557311 ZNF836Q6ZNA1 936 aa4.15□□□□□ -1.75
ATXN3-247ENST00000557311 C1QL2Q7Z5L3 287 aa4.15□□□□□ -1.75
ATXN3-247ENST00000557311 ZCCHC24Q8N2G6 241 aaKnown RBP4.15□□□□□ -1.75
ATXN3-247ENST00000557311 FAM86B1Q8N7N1 296 aa4.15□□□□□ -1.75
ATXN3-247ENST00000557311 ZBTB34Q8NCN2 500 aa4.15□□□□□ -1.75
ATXN3-247ENST00000557311 STXBP6Q8NFX7 210 aa4.15□□□□□ -1.75
ATXN3-247ENST00000557311 OR10H4Q8NGA5 316 aa4.15□□□□□ -1.75
ATXN3-247ENST00000557311 OR8J3Q8NGG0 315 aa4.15□□□□□ -1.75
ATXN3-247ENST00000557311 OR52E4Q8NGH9 312 aa4.15□□□□□ -1.75
ATXN3-247ENST00000557311 OR8J1Q8NGP2 316 aa4.15□□□□□ -1.75
ATXN3-247ENST00000557311 OR5W2Q8NH69 310 aa4.15□□□□□ -1.75
ATXN3-247ENST00000557311 PIGXQ8TBF5 258 aa4.15□□□□□ -1.75
ATXN3-247ENST00000557311 ACOT12Q8WYK0 555 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms