RNA–Protein interactions for RNA: ENST00000556909.1

VIPAS39-209, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-209ENST00000556909 RPS7P62081 194 aaKnown RBP14.8□□□□□ -0.04
VIPAS39-209ENST00000556909 MS4A2Q01362 244 aa14.8□□□□□ -0.04
VIPAS39-209ENST00000556909 TRIM25Q14258 630 aaKnown RBP14.8□□□□□ -0.04
VIPAS39-209ENST00000556909 ZNF782Q6ZMW2 699 aaPredicted RBP14.8□□□□□ -0.04
VIPAS39-209ENST00000556909 DYNAPQ8N1N2 210 aa14.8□□□□□ -0.04
VIPAS39-209ENST00000556909 ARHGAP24Q8N264 748 aa14.8□□□□□ -0.04
VIPAS39-209ENST00000556909 Q8N2B8 174 aa14.8□□□□□ -0.04
VIPAS39-209ENST00000556909 OR4S1Q8NGB4 309 aa14.8□□□□□ -0.04
VIPAS39-209ENST00000556909 OR4M1Q8NGD0 313 aa14.8□□□□□ -0.04
VIPAS39-209ENST00000556909 OR51E1Q8TCB6 317 aa14.8□□□□□ -0.04
VIPAS39-209ENST00000556909 MRAPQ8TCY5 172 aa14.8□□□□□ -0.04
VIPAS39-209ENST00000556909 ITFG2Q969R8 447 aa14.8□□□□□ -0.04
VIPAS39-209ENST00000556909 PBOV1Q9GZY1 135 aa14.8□□□□□ -0.04
VIPAS39-209ENST00000556909 TCF19Q9Y242 345 aa14.8□□□□□ -0.04
VIPAS39-209ENST00000556909 PIGLQ9Y2B2 252 aa14.8□□□□□ -0.04
VIPAS39-209ENST00000556909 hCG_1809904A0A1W2PP81 198 aa14.79□□□□□ -0.04
VIPAS39-209ENST00000556909 A0A1W2PPE2 198 aa14.79□□□□□ -0.04
VIPAS39-209ENST00000556909 A0A1W2PR64 198 aa14.79□□□□□ -0.04
VIPAS39-209ENST00000556909 A0A1W2PRV1 198 aa14.79□□□□□ -0.04
VIPAS39-209ENST00000556909 FAM90A8PA6NJQ4 464 aa14.79□□□□□ -0.04
VIPAS39-209ENST00000556909 PRR32B1ATL7 298 aa14.79□□□□□ -0.04
VIPAS39-209ENST00000556909 XPNPEP2O43895 674 aa14.79□□□□□ -0.04
VIPAS39-209ENST00000556909 DCTN3O75935 186 aa14.79□□□□□ -0.04
VIPAS39-209ENST00000556909 HMGN1P05114 100 aa14.79□□□□□ -0.04
VIPAS39-209ENST00000556909 RAP2AP10114 183 aa14.79□□□□□ -0.04
VIPAS39-209ENST00000556909 PRDX2P32119 198 aa14.79□□□□□ -0.04
VIPAS39-209ENST00000556909 PLA1AQ53H76 456 aa14.79□□□□□ -0.04
VIPAS39-209ENST00000556909 ZBTB37Q5TC79 503 aa14.79□□□□□ -0.04
VIPAS39-209ENST00000556909 KCTD18Q6PI47 426 aaPredicted RBP14.79□□□□□ -0.04
VIPAS39-209ENST00000556909 DEGS2Q6QHC5 323 aa14.79□□□□□ -0.04
VIPAS39-209ENST00000556909 TMEM179BQ7Z7N9 219 aa14.79□□□□□ -0.04
VIPAS39-209ENST00000556909 OR2T27Q8NH04 317 aa14.79□□□□□ -0.04
VIPAS39-209ENST00000556909 TEAD3Q99594 435 aa14.79□□□□□ -0.04
VIPAS39-209ENST00000556909 YIPF3Q9GZM5 350 aa14.79□□□□□ -0.04
VIPAS39-209ENST00000556909 MMP28Q9H239 520 aa14.79□□□□□ -0.04
VIPAS39-209ENST00000556909 ENPP5Q9UJA9 477 aa14.79□□□□□ -0.04
VIPAS39-209ENST00000556909 ADARB2-AS1A8MUL3 147 aa14.78□□□□□ -0.04
VIPAS39-209ENST00000556909 B2RBV5 119 aa14.78□□□□□ -0.04
VIPAS39-209ENST00000556909 J3QT63 122 aa14.78□□□□□ -0.04
VIPAS39-209ENST00000556909 GSC2O15499 205 aa14.78□□□□□ -0.04
VIPAS39-209ENST00000556909 CST1P01037 141 aa14.78□□□□□ -0.04
VIPAS39-209ENST00000556909 OSMP13725 252 aa14.78□□□□□ -0.04
VIPAS39-209ENST00000556909 HAAOP46952 286 aa14.78□□□□□ -0.04
VIPAS39-209ENST00000556909 MNAT1P51948 309 aa14.78□□□□□ -0.04
VIPAS39-209ENST00000556909 DLX6P56179 175 aa14.78□□□□□ -0.04
VIPAS39-209ENST00000556909 CDK5Q00535 292 aa14.78□□□□□ -0.04
VIPAS39-209ENST00000556909 APOFQ13790 326 aa14.78□□□□□ -0.04
VIPAS39-209ENST00000556909 ZNF684Q5T5D7 378 aa14.78□□□□□ -0.04
VIPAS39-209ENST00000556909 CCBE1Q6UXH8 406 aaPredicted RBP14.78□□□□□ -0.04
VIPAS39-209ENST00000556909 NDUFA11Q86Y39 141 aa14.78□□□□□ -0.04
VIPAS39-209ENST00000556909 WIPF2Q8TF74 440 aaPredicted RBP14.78□□□□□ -0.04
VIPAS39-209ENST00000556909 NRIP2Q9BQI9 281 aa14.78□□□□□ -0.04
VIPAS39-209ENST00000556909 MROQ9BYG7 248 aa14.78□□□□□ -0.04
VIPAS39-209ENST00000556909 TTTY10Q9BZA0 68 aa14.78□□□□□ -0.04
VIPAS39-209ENST00000556909 C1orf21Q9H246 121 aa14.78□□□□□ -0.04
VIPAS39-209ENST00000556909 NECAP2Q9NVZ3 263 aa14.78□□□□□ -0.04
VIPAS39-209ENST00000556909 NUFIP1Q9UHK0 495 aaKnown RBP14.78□□□□□ -0.04
VIPAS39-209ENST00000556909 ODF3BA8MYP8 253 aa14.77□□□□□ -0.05
VIPAS39-209ENST00000556909 NOS1APO75052 506 aaPredicted RBP14.77□□□□□ -0.05
VIPAS39-209ENST00000556909 DHRS3O75911 302 aa14.77□□□□□ -0.05
VIPAS39-209ENST00000556909 NXPH2O95156 264 aa14.77□□□□□ -0.05
VIPAS39-209ENST00000556909 NRASP01111 189 aa14.77□□□□□ -0.05
VIPAS39-209ENST00000556909 TK1P04183 234 aa14.77□□□□□ -0.05
VIPAS39-209ENST00000556909 MRPL3P09001 348 aaKnown RBP14.77□□□□□ -0.05
VIPAS39-209ENST00000556909 PIPP12273 146 aaPredicted RBP14.77□□□□□ -0.05
VIPAS39-209ENST00000556909 RAB13P51153 203 aa14.77□□□□□ -0.05
VIPAS39-209ENST00000556909 MFGE8Q08431 387 aaPredicted RBP14.77□□□□□ -0.05
VIPAS39-209ENST00000556909 ZNF829Q3KNS6 432 aaPredicted RBP14.77□□□□□ -0.05
VIPAS39-209ENST00000556909 PIGWQ7Z7B1 504 aa14.77□□□□□ -0.05
VIPAS39-209ENST00000556909 TMEM219Q86XT9 240 aa14.77□□□□□ -0.05
VIPAS39-209ENST00000556909 ZNF573Q86YE8 665 aa14.77□□□□□ -0.05
VIPAS39-209ENST00000556909 BATF2Q8N1L9 274 aa14.77□□□□□ -0.05
VIPAS39-209ENST00000556909 FOXRED1Q96CU9 486 aaPredicted RBP14.77□□□□□ -0.05
VIPAS39-209ENST00000556909 R3HDM4Q96D70 268 aa14.77□□□□□ -0.05
VIPAS39-209ENST00000556909 OR8B4Q96RC9 309 aa14.77□□□□□ -0.05
VIPAS39-209ENST00000556909 CHID1Q9BWS9 393 aa14.77□□□□□ -0.05
VIPAS39-209ENST00000556909 CDCA4Q9BXL8 241 aa14.77□□□□□ -0.05
VIPAS39-209ENST00000556909 HES4Q9HCC6 221 aa14.77□□□□□ -0.05
VIPAS39-209ENST00000556909 AURKAIP1Q9NWT8 199 aaPredicted RBP14.77□□□□□ -0.05
VIPAS39-209ENST00000556909 OR14J1Q9UGF5 321 aa14.77□□□□□ -0.05
VIPAS39-209ENST00000556909 COPS3Q9UNS2 423 aa14.77□□□□□ -0.05
VIPAS39-209ENST00000556909 POLDIP2Q9Y2S7 368 aa14.77□□□□□ -0.05
VIPAS39-209ENST00000556909 TBL2Q9Y4P3 447 aaKnown RBP14.77□□□□□ -0.05
VIPAS39-209ENST00000556909 A6NDX4 124 aa14.76□□□□□ -0.05
VIPAS39-209ENST00000556909 CCDC182A6NF36 153 aa14.76□□□□□ -0.05
VIPAS39-209ENST00000556909 C17orf98A8MV24 154 aa14.76□□□□□ -0.05
VIPAS39-209ENST00000556909 TTRP02766 147 aa14.76□□□□□ -0.05
VIPAS39-209ENST00000556909 ARG1P05089 322 aa14.76□□□□□ -0.05
VIPAS39-209ENST00000556909 LOXL3P58215 753 aa14.76□□□□□ -0.05
VIPAS39-209ENST00000556909 ROM1Q03395 351 aa14.76□□□□□ -0.05
VIPAS39-209ENST00000556909 EMX1Q04741 257 aaPredicted RBP14.76□□□□□ -0.05
VIPAS39-209ENST00000556909 CNN3Q15417 329 aaKnown RBP14.76□□□□□ -0.05
VIPAS39-209ENST00000556909 LDLRAD2Q5SZI1 272 aa14.76□□□□□ -0.05
VIPAS39-209ENST00000556909 TMEM236Q5W0B7 351 aa14.76□□□□□ -0.05
VIPAS39-209ENST00000556909 CALHM1Q8IU99 346 aa14.76□□□□□ -0.05
VIPAS39-209ENST00000556909 ZNF679Q8IYX0 411 aa14.76□□□□□ -0.05
VIPAS39-209ENST00000556909 ADGRG5Q8IZF4 528 aa14.76□□□□□ -0.05
VIPAS39-209ENST00000556909 HS3ST5Q8IZT8 346 aa14.76□□□□□ -0.05
VIPAS39-209ENST00000556909 OR4F17Q8NGA8 305 aa14.76□□□□□ -0.05
VIPAS39-209ENST00000556909 RPS4Y2Q8TD47 263 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms