RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 RFPL4BQ6ZWI9 263 aa12.66□□□□□ -0.38
VPS33B-205ENST00000556096 CD163Q86VB7 1156 aa12.66□□□□□ -0.38
VPS33B-205ENST00000556096 ZDHHC23Q8IYP9 409 aa12.66□□□□□ -0.38
VPS33B-205ENST00000556096 CISD2Q8N5K1 135 aaKnown RBP12.66□□□□□ -0.38
VPS33B-205ENST00000556096 OR51S1Q8NGJ8 323 aa12.66□□□□□ -0.38
VPS33B-205ENST00000556096 ARHGAP5-AS1Q96IT6 56 aa12.66□□□□□ -0.38
VPS33B-205ENST00000556096 OCSTAMPQ9BR26 566 aa12.66□□□□□ -0.38
VPS33B-205ENST00000556096 PAPOLGQ9BWT3 736 aaKnown RBP12.66□□□□□ -0.38
VPS33B-205ENST00000556096 MED28Q9H204 178 aa12.66□□□□□ -0.38
VPS33B-205ENST00000556096 TP63Q9H3D4 680 aaPredicted RBP12.66□□□□□ -0.38
VPS33B-205ENST00000556096 CDH20Q9HBT6 801 aa12.66□□□□□ -0.38
VPS33B-205ENST00000556096 GPR160Q9UJ42 338 aa12.66□□□□□ -0.38
VPS33B-205ENST00000556096 KALRNO60229 2985 aa12.66□□□□□ -0.38
VPS33B-205ENST00000556096 A0A1B0GUH1 482 aa12.65□□□□□ -0.38
VPS33B-205ENST00000556096 AKR7A2O43488 359 aa12.65□□□□□ -0.38
VPS33B-205ENST00000556096 SPRY1O43609 319 aaPredicted RBP12.65□□□□□ -0.38
VPS33B-205ENST00000556096 ANGPTL7O43827 346 aa12.65□□□□□ -0.38
VPS33B-205ENST00000556096 HTR3BO95264 441 aa12.65□□□□□ -0.38
VPS33B-205ENST00000556096 IGKV3-15P01624 115 aa12.65□□□□□ -0.38
VPS33B-205ENST00000556096 IL5P05113 134 aa12.65□□□□□ -0.38
VPS33B-205ENST00000556096 ZNF735P0CB33 412 aa12.65□□□□□ -0.38
VPS33B-205ENST00000556096 MPZP25189 248 aa12.65□□□□□ -0.38
VPS33B-205ENST00000556096 BLVRBP30043 206 aaPredicted RBP12.65□□□□□ -0.38
VPS33B-205ENST00000556096 PPA1Q15181 289 aa12.65□□□□□ -0.38
VPS33B-205ENST00000556096 METTL11BQ5VVY1 283 aa12.65□□□□□ -0.38
VPS33B-205ENST00000556096 FBXW12Q6X9E4 464 aa12.65□□□□□ -0.38
VPS33B-205ENST00000556096 TCTE3Q8IZS6 198 aa12.65□□□□□ -0.38
VPS33B-205ENST00000556096 OR5A2Q8NGI9 324 aa12.65□□□□□ -0.38
VPS33B-205ENST00000556096 PECRQ9BY49 303 aa12.65□□□□□ -0.38
VPS33B-205ENST00000556096 IFT46Q9NQC8 304 aa12.65□□□□□ -0.38
VPS33B-205ENST00000556096 ING3Q9NXR8 418 aa12.65□□□□□ -0.38
VPS33B-205ENST00000556096 MPC1Q9Y5U8 109 aa12.65□□□□□ -0.38
VPS33B-205ENST00000556096 MYO7BQ6PIF6 2116 aa12.65□□□□□ -0.38
VPS33B-205ENST00000556096 IGKV1-12A0A0C4DH73 117 aa12.65□□□□□ -0.38
VPS33B-205ENST00000556096 SERPINE3A8MV23 424 aa12.65□□□□□ -0.38
VPS33B-205ENST00000556096 IGKV1D-12P01611 117 aa12.65□□□□□ -0.38
VPS33B-205ENST00000556096 CELA3BP08861 270 aa12.65□□□□□ -0.38
VPS33B-205ENST00000556096 CEACAM8P31997 349 aaPredicted RBP12.65□□□□□ -0.38
VPS33B-205ENST00000556096 IDH3GP51553 393 aaPredicted RBP12.65□□□□□ -0.38
VPS33B-205ENST00000556096 TSC22D1Q15714 1073 aa12.65□□□□□ -0.38
VPS33B-205ENST00000556096 RTN4RL2Q86UN3 420 aa12.65□□□□□ -0.38
VPS33B-205ENST00000556096 MYPOPQ86VE0 399 aaPredicted RBP12.65□□□□□ -0.38
VPS33B-205ENST00000556096 CXorf67Q86X51 503 aaPredicted RBP12.65□□□□□ -0.38
VPS33B-205ENST00000556096 SAXO1Q8IYX7 474 aa12.65□□□□□ -0.38
VPS33B-205ENST00000556096 GVQW1Q8N7I0 195 aa12.65□□□□□ -0.38
VPS33B-205ENST00000556096 Q8NFD4 153 aa12.65□□□□□ -0.38
VPS33B-205ENST00000556096 ST8SIA4Q92187 359 aa12.65□□□□□ -0.38
VPS33B-205ENST00000556096 SLC25A21Q9BQT8 299 aaPredicted RBP12.65□□□□□ -0.38
VPS33B-205ENST00000556096 GINS4Q9BRT9 223 aa12.65□□□□□ -0.38
VPS33B-205ENST00000556096 TINAGL1Q9GZM7 467 aaPredicted RBP12.65□□□□□ -0.38
VPS33B-205ENST00000556096 OPN3Q9H1Y3 402 aaPredicted RBP12.65□□□□□ -0.38
VPS33B-205ENST00000556096 RANGRFQ9HD47 186 aaPredicted RBP12.65□□□□□ -0.38
VPS33B-205ENST00000556096 SCP2D1Q9UJQ7 156 aa12.65□□□□□ -0.38
VPS33B-205ENST00000556096 A0A1W2PR80 420 aa12.64□□□□□ -0.39
VPS33B-205ENST00000556096 ANKRD30BLA7E2S9 258 aa12.64□□□□□ -0.39
VPS33B-205ENST00000556096 A8MV72 311 aaPredicted RBP12.64□□□□□ -0.39
VPS33B-205ENST00000556096 DISC1C4P0D8 188 aa12.64□□□□□ -0.39
VPS33B-205ENST00000556096 M0QYG6 137 aa12.64□□□□□ -0.39
VPS33B-205ENST00000556096 SMPD2O60906 423 aa12.64□□□□□ -0.39
VPS33B-205ENST00000556096 FCER2P06734 321 aa12.64□□□□□ -0.39
VPS33B-205ENST00000556096 TDGF1P3P51864 188 aa12.64□□□□□ -0.39
VPS33B-205ENST00000556096 CD83Q01151 205 aa12.64□□□□□ -0.39
VPS33B-205ENST00000556096 ZMYND11Q15326 602 aa12.64□□□□□ -0.39
VPS33B-205ENST00000556096 RNASE10Q5GAN6 216 aaKnown RBP12.64□□□□□ -0.39
VPS33B-205ENST00000556096 GLDNQ6ZMI3 551 aaPredicted RBP12.64□□□□□ -0.39
VPS33B-205ENST00000556096 BPIFB2Q8N4F0 458 aa12.64□□□□□ -0.39
VPS33B-205ENST00000556096 FAM169BQ8N8A8 192 aa12.64□□□□□ -0.39
VPS33B-205ENST00000556096 OR4S1Q8NGB4 309 aa12.64□□□□□ -0.39
VPS33B-205ENST00000556096 OR51F2Q8NH61 342 aa12.64□□□□□ -0.39
VPS33B-205ENST00000556096 HPSE2Q8WWQ2 592 aa12.64□□□□□ -0.39
VPS33B-205ENST00000556096 HIST1H2AAQ96QV6 131 aa12.64□□□□□ -0.39
VPS33B-205ENST00000556096 SLC2A8Q9NY64 477 aa12.64□□□□□ -0.39
VPS33B-205ENST00000556096 CRIM1Q9NZV1 1036 aa12.64□□□□□ -0.39
VPS33B-205ENST00000556096 HSF4Q9ULV5 492 aa12.64□□□□□ -0.39
VPS33B-205ENST00000556096 PLEKHA6Q9Y2H5 1048 aa12.64□□□□□ -0.39
VPS33B-205ENST00000556096 SPTA1P02549 2419 aa12.63□□□□□ -0.39
VPS33B-205ENST00000556096 PYCARD-AS1I3L0S3 204 aa12.63□□□□□ -0.39
VPS33B-205ENST00000556096 C1QL1O75973 258 aa12.63□□□□□ -0.39
VPS33B-205ENST00000556096 PLATP00750 562 aa12.63□□□□□ -0.39
VPS33B-205ENST00000556096 AMY2AP04746 511 aa12.63□□□□□ -0.39
VPS33B-205ENST00000556096 TUBG1P23258 451 aa12.63□□□□□ -0.39
VPS33B-205ENST00000556096 PPP1CBP62140 327 aa12.63□□□□□ -0.39
VPS33B-205ENST00000556096 CBX3Q13185 183 aa12.63□□□□□ -0.39
VPS33B-205ENST00000556096 ARFRP1Q13795 201 aa12.63□□□□□ -0.39
VPS33B-205ENST00000556096 FCN2Q15485 313 aa12.63□□□□□ -0.39
VPS33B-205ENST00000556096 ZFP69Q49AA0 526 aa12.63□□□□□ -0.39
VPS33B-205ENST00000556096 BHLHA15Q7RTS1 189 aaPredicted RBP12.63□□□□□ -0.39
VPS33B-205ENST00000556096 TMEM200AQ86VY9 491 aa12.63□□□□□ -0.39
VPS33B-205ENST00000556096 CALHM1Q8IU99 346 aa12.63□□□□□ -0.39
VPS33B-205ENST00000556096 OSR2Q8N2R0 312 aa12.63□□□□□ -0.39
VPS33B-205ENST00000556096 PIAS4Q8N2W9 510 aaPredicted RBP12.63□□□□□ -0.39
VPS33B-205ENST00000556096 ZNF611Q8N823 705 aa12.63□□□□□ -0.39
VPS33B-205ENST00000556096 NAXEQ8NCW5 288 aa12.63□□□□□ -0.39
VPS33B-205ENST00000556096 FYTTD1Q96QD9 318 aaKnown RBP12.63□□□□□ -0.39
VPS33B-205ENST00000556096 SFXN3Q9BWM7 321 aa12.63□□□□□ -0.39
VPS33B-205ENST00000556096 FGF23Q9GZV9 251 aaPredicted RBP12.63□□□□□ -0.39
VPS33B-205ENST00000556096 ALX4Q9H161 411 aaPredicted RBP12.63□□□□□ -0.39
VPS33B-205ENST00000556096 MOV10Q9HCE1 1003 aaKnown RBP12.63□□□□□ -0.39
VPS33B-205ENST00000556096 TUBG2Q9NRH3 451 aa12.63□□□□□ -0.39
VPS33B-205ENST00000556096 AMDHD2Q9Y303 409 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms