RNA–Protein interactions for RNA: ENST00000555774.5

SHMT2-222, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best)

Gene SHMT2, Length 2,311 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-222ENST00000555774 MST1LQ2TV78 715 aa11.77□□□□□ -0.53
SHMT2-222ENST00000555774 ZNF100Q8IYN0 542 aa11.77□□□□□ -0.53
SHMT2-222ENST00000555774 OR51F2Q8NH61 342 aa11.77□□□□□ -0.53
SHMT2-222ENST00000555774 OR1F12Q8NHA8 337 aa11.77□□□□□ -0.53
SHMT2-222ENST00000555774 CPT1CQ8TCG5 803 aa11.77□□□□□ -0.53
SHMT2-222ENST00000555774 REEP6Q96HR9 211 aa11.77□□□□□ -0.53
SHMT2-222ENST00000555774 CYYR1Q96J86 154 aa11.77□□□□□ -0.53
SHMT2-222ENST00000555774 JSRP1Q96MG2 331 aaPredicted RBP11.77□□□□□ -0.53
SHMT2-222ENST00000555774 SEC11CQ9BY50 192 aa11.77□□□□□ -0.53
SHMT2-222ENST00000555774 SRXN1Q9BYN0 137 aa11.77□□□□□ -0.53
SHMT2-222ENST00000555774 RGCCQ9H4X1 137 aa11.77□□□□□ -0.53
SHMT2-222ENST00000555774 NECAP2Q9NVZ3 263 aa11.77□□□□□ -0.53
SHMT2-222ENST00000555774 PLATP00750 562 aa11.76□□□□□ -0.53
SHMT2-222ENST00000555774 ADCYAP1P18509 176 aa11.76□□□□□ -0.53
SHMT2-222ENST00000555774 RSU1Q15404 277 aa11.76□□□□□ -0.53
SHMT2-222ENST00000555774 IAH1Q2TAA2 248 aaPredicted RBP11.76□□□□□ -0.53
SHMT2-222ENST00000555774 PUSL1Q8N0Z8 303 aaKnown RBP11.76□□□□□ -0.53
SHMT2-222ENST00000555774 BHLHE23Q8NDY6 225 aa11.76□□□□□ -0.53
SHMT2-222ENST00000555774 TMEM38BQ9NVV0 291 aa11.76□□□□□ -0.53
SHMT2-222ENST00000555774 GSKIPQ9P0R6 139 aa11.76□□□□□ -0.53
SHMT2-222ENST00000555774 PADI1Q9ULC6 663 aa11.76□□□□□ -0.53
SHMT2-222ENST00000555774 IGKV1D-8A0A087WSZ0 117 aa11.76□□□□□ -0.53
SHMT2-222ENST00000555774 OR6C6A6NF89 314 aa11.76□□□□□ -0.53
SHMT2-222ENST00000555774 F8W036 122 aa11.76□□□□□ -0.53
SHMT2-222ENST00000555774 SIGLEC5O15389 551 aa11.76□□□□□ -0.53
SHMT2-222ENST00000555774 SNAPINO95295 136 aa11.76□□□□□ -0.53
SHMT2-222ENST00000555774 CST4P01036 141 aa11.76□□□□□ -0.53
SHMT2-222ENST00000555774 SFTPBP07988 381 aa11.76□□□□□ -0.53
SHMT2-222ENST00000555774 ZNF708P17019 499 aa11.76□□□□□ -0.53
SHMT2-222ENST00000555774 FOLR3P41439 243 aa11.76□□□□□ -0.53
SHMT2-222ENST00000555774 RBP2P50120 134 aa11.76□□□□□ -0.53
SHMT2-222ENST00000555774 B3GALT5-AS1P59052 145 aa11.76□□□□□ -0.53
SHMT2-222ENST00000555774 BLOC1S1P78537 153 aa11.76□□□□□ -0.53
SHMT2-222ENST00000555774 ZFP36L1Q07352 338 aaKnown RBP11.76□□□□□ -0.53
SHMT2-222ENST00000555774 SIGLEC14Q08ET2 396 aa11.76□□□□□ -0.53
SHMT2-222ENST00000555774 TMEM42Q69YG0 159 aa11.76□□□□□ -0.53
SHMT2-222ENST00000555774 DHRS11Q6UWP2 260 aa11.76□□□□□ -0.53
SHMT2-222ENST00000555774 SPAG16Q8N0X2 631 aa11.76□□□□□ -0.53
SHMT2-222ENST00000555774 BOLLQ8N9W6 283 aaKnown RBP11.76□□□□□ -0.53
SHMT2-222ENST00000555774 OR4A4PQ8NGN8 299 aa11.76□□□□□ -0.53
SHMT2-222ENST00000555774 TAF9BQ9HBM6 251 aa11.76□□□□□ -0.53
SHMT2-222ENST00000555774 IL36GQ9NZH8 169 aa11.76□□□□□ -0.53
SHMT2-222ENST00000555774 GPR31O00270 319 aa11.75□□□□□ -0.53
SHMT2-222ENST00000555774 TERTO14746 1132 aaKnown RBP11.75□□□□□ -0.53
SHMT2-222ENST00000555774 DEDDO75618 318 aa11.75□□□□□ -0.53
SHMT2-222ENST00000555774 OR5H8P0DN80 308 aa11.75□□□□□ -0.53
SHMT2-222ENST00000555774 ACKR3P25106 362 aa11.75□□□□□ -0.53
SHMT2-222ENST00000555774 DMRTC1Q5HYR2 192 aa11.75□□□□□ -0.53
SHMT2-222ENST00000555774 WDR5BQ86VZ2 330 aa11.75□□□□□ -0.53
SHMT2-222ENST00000555774 BORCS8Q96FH0 119 aa11.75□□□□□ -0.53
SHMT2-222ENST00000555774 POM121Q96HA1 1249 aa11.75□□□□□ -0.53
SHMT2-222ENST00000555774 TECTBQ96PL2 329 aa11.75□□□□□ -0.53
SHMT2-222ENST00000555774 CMSS1Q9BQ75 279 aaKnown RBP11.75□□□□□ -0.53
SHMT2-222ENST00000555774 POMT1Q9Y6A1 747 aa11.75□□□□□ -0.53
SHMT2-222ENST00000555774 K7EPK0 472 aa11.75□□□□□ -0.53
SHMT2-222ENST00000555774 JTBO76095 146 aa11.75□□□□□ -0.53
SHMT2-222ENST00000555774 CHATP28329 748 aa11.75□□□□□ -0.53
SHMT2-222ENST00000555774 SULT1A2P50226 295 aa11.75□□□□□ -0.53
SHMT2-222ENST00000555774 CAV2P51636 162 aa11.75□□□□□ -0.53
SHMT2-222ENST00000555774 PCBD1P61457 104 aa11.75□□□□□ -0.53
SHMT2-222ENST00000555774 TMEM268Q5VZI3 342 aa11.75□□□□□ -0.53
SHMT2-222ENST00000555774 DHRS7BQ6IAN0 325 aaPredicted RBP11.75□□□□□ -0.53
SHMT2-222ENST00000555774 FAM71E2Q8N5Q1 922 aa11.75□□□□□ -0.53
SHMT2-222ENST00000555774 GALNT14Q96FL9 552 aa11.75□□□□□ -0.53
SHMT2-222ENST00000555774 PLEKHA2Q9HB19 425 aa11.75□□□□□ -0.53
SHMT2-222ENST00000555774 OR2S2Q9NQN1 319 aa11.75□□□□□ -0.53
SHMT2-222ENST00000555774 FSCN3Q9NQT6 498 aa11.75□□□□□ -0.53
SHMT2-222ENST00000555774 ZFP57Q9NU63 452 aa11.75□□□□□ -0.53
SHMT2-222ENST00000555774 UQCC1Q9NVA1 299 aa11.75□□□□□ -0.53
SHMT2-222ENST00000555774 AK3Q9UIJ7 227 aa11.75□□□□□ -0.53
SHMT2-222ENST00000555774 KCNIP3Q9Y2W7 256 aa11.75□□□□□ -0.53
SHMT2-222ENST00000555774 ZNF716A6NP11 495 aa11.74□□□□□ -0.53
SHMT2-222ENST00000555774 P04436 131 aa11.74□□□□□ -0.53
SHMT2-222ENST00000555774 FCGR3AP08637 254 aa11.74□□□□□ -0.53
SHMT2-222ENST00000555774 RPL12P30050 165 aaKnown RBP11.74□□□□□ -0.53
SHMT2-222ENST00000555774 PMELP40967 661 aa11.74□□□□□ -0.53
SHMT2-222ENST00000555774 ARHGDIBP52566 201 aa11.74□□□□□ -0.53
SHMT2-222ENST00000555774 RIPPLY2Q5TAB7 128 aa11.74□□□□□ -0.53
SHMT2-222ENST00000555774 ABLIM2Q6H8Q1 611 aa11.74□□□□□ -0.53
SHMT2-222ENST00000555774 TMEM200AQ86VY9 491 aa11.74□□□□□ -0.53
SHMT2-222ENST00000555774 LDLRAD3Q86YD5 345 aa11.74□□□□□ -0.53
SHMT2-222ENST00000555774 ZNF837Q96EG3 531 aaPredicted RBP11.74□□□□□ -0.53
SHMT2-222ENST00000555774 PRRX2Q99811 253 aa11.74□□□□□ -0.53
SHMT2-222ENST00000555774 MICU1Q9BPX6 476 aa11.74□□□□□ -0.53
SHMT2-222ENST00000555774 NAA60Q9H7X0 242 aa11.74□□□□□ -0.53
SHMT2-222ENST00000555774 BCO1Q9HAY6 547 aa11.74□□□□□ -0.53
SHMT2-222ENST00000555774 TREM1Q9NP99 234 aa11.74□□□□□ -0.53
SHMT2-222ENST00000555774 ACKR4Q9NPB9 350 aa11.74□□□□□ -0.53
SHMT2-222ENST00000555774 PARP11Q9NR21 331 aa11.74□□□□□ -0.53
SHMT2-222ENST00000555774 TIMM10BQ9Y5J6 103 aa11.74□□□□□ -0.53
SHMT2-222ENST00000555774 FAM230AA0A1W2PPH8 454 aa11.74□□□□□ -0.53
SHMT2-222ENST00000555774 G3V3Y1 287 aa11.74□□□□□ -0.53
SHMT2-222ENST00000555774 LCATP04180 440 aa11.74□□□□□ -0.53
SHMT2-222ENST00000555774 ZNF728P0DKX0 622 aa11.74□□□□□ -0.53
SHMT2-222ENST00000555774 CARD18P57730 90 aa11.74□□□□□ -0.53
SHMT2-222ENST00000555774 CHAF1BQ13112 559 aa11.74□□□□□ -0.53
SHMT2-222ENST00000555774 GUCA2BQ16661 112 aa11.74□□□□□ -0.53
SHMT2-222ENST00000555774 PEAR1Q5VY43 1037 aaPredicted RBP11.74□□□□□ -0.53
SHMT2-222ENST00000555774 GGNBP1Q5YKI7 109 aa11.74□□□□□ -0.53
SHMT2-222ENST00000555774 RPL7L1Q6DKI1 246 aaKnown RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms