RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 MRI1Q9BV20 369 aa8.68□□□□□ -1.02
SRP54-208ENST00000555557 RTL8AQ9BWD3 113 aa8.68□□□□□ -1.02
SRP54-208ENST00000555557 OR51I2Q9H344 312 aa8.68□□□□□ -1.02
SRP54-208ENST00000555557 CYSLTR2Q9NS75 346 aa8.68□□□□□ -1.02
SRP54-208ENST00000555557 PKDREJQ9NTG1 2253 aa8.67□□□□□ -1.02
SRP54-208ENST00000555557 DOPEY1Q5JWR5 2465 aa8.67□□□□□ -1.02
SRP54-208ENST00000555557 FABP12A6NFH5 140 aa8.67□□□□□ -1.02
SRP54-208ENST00000555557 CLDN25C9JDP6 229 aa8.67□□□□□ -1.02
SRP54-208ENST00000555557 PRSS44E7EML9 344 aa8.67□□□□□ -1.02
SRP54-208ENST00000555557 SYNGR1O43759 233 aa8.67□□□□□ -1.02
SRP54-208ENST00000555557 TMEM127O75204 238 aa8.67□□□□□ -1.02
SRP54-208ENST00000555557 CRTAPO75718 401 aaPredicted RBP8.67□□□□□ -1.02
SRP54-208ENST00000555557 RHBDL1O75783 438 aa8.67□□□□□ -1.02
SRP54-208ENST00000555557 KDM4BO94953 1096 aa8.67□□□□□ -1.02
SRP54-208ENST00000555557 BPNT1O95861 308 aa8.67□□□□□ -1.02
SRP54-208ENST00000555557 MPIG6BO95866 241 aa8.67□□□□□ -1.02
SRP54-208ENST00000555557 APOA1P02647 267 aa8.67□□□□□ -1.02
SRP54-208ENST00000555557 SFTPBP07988 381 aa8.67□□□□□ -1.02
SRP54-208ENST00000555557 NPBWR2P48146 333 aa8.67□□□□□ -1.02
SRP54-208ENST00000555557 HOXA4Q00056 320 aaPredicted RBP8.67□□□□□ -1.02
SRP54-208ENST00000555557 ZNF154Q13106 437 aa8.67□□□□□ -1.02
SRP54-208ENST00000555557 ZNF672Q499Z4 452 aaPredicted RBP8.67□□□□□ -1.02
SRP54-208ENST00000555557 FAM76BQ5HYJ3 339 aa8.67□□□□□ -1.02
SRP54-208ENST00000555557 SPANXN2Q5MJ10 180 aa8.67□□□□□ -1.02
SRP54-208ENST00000555557 PRAMEF6Q5VXH4 476 aa8.67□□□□□ -1.02
SRP54-208ENST00000555557 FAM131AQ6UXB0 335 aa8.67□□□□□ -1.02
SRP54-208ENST00000555557 MEX3BQ6ZN04 569 aaKnown RBP8.67□□□□□ -1.02
SRP54-208ENST00000555557 LINC00299Q6ZSB3 139 aa8.67□□□□□ -1.02
SRP54-208ENST00000555557 SNX29P2Q8IUI4 249 aa8.67□□□□□ -1.02
SRP54-208ENST00000555557 SLAMF9Q96A28 289 aa8.67□□□□□ -1.02
SRP54-208ENST00000555557 ZNF488Q96MN9 340 aa8.67□□□□□ -1.02
SRP54-208ENST00000555557 TMEM204Q9BSN7 226 aa8.67□□□□□ -1.02
SRP54-208ENST00000555557 ATG5Q9H1Y0 275 aa8.67□□□□□ -1.02
SRP54-208ENST00000555557 MRPS7Q9Y2R9 242 aaKnown RBP8.67□□□□□ -1.02
SRP54-208ENST00000555557 ETV7Q9Y603 341 aa8.67□□□□□ -1.02
SRP54-208ENST00000555557 V9GYH0 126 aa8.67□□□□□ -1.02
SRP54-208ENST00000555557 FLNBO75369 2602 aaKnown RBP8.66□□□□□ -1.02
SRP54-208ENST00000555557 A0A1W2PPR1 153 aa8.66□□□□□ -1.02
SRP54-208ENST00000555557 OR5B21A6NL26 309 aa8.66□□□□□ -1.02
SRP54-208ENST00000555557 TMEM14DPA8MWL7 114 aa8.66□□□□□ -1.02
SRP54-208ENST00000555557 F8VVB4 439 aa8.66□□□□□ -1.02
SRP54-208ENST00000555557 F8VWA3 439 aa8.66□□□□□ -1.02
SRP54-208ENST00000555557 CDIPTO14735 213 aa8.66□□□□□ -1.02
SRP54-208ENST00000555557 CTAG2O75638 210 aa8.66□□□□□ -1.02
SRP54-208ENST00000555557 HTR3BO95264 441 aa8.66□□□□□ -1.02
SRP54-208ENST00000555557 APOBEC3AP31941 199 aaPredicted RBP8.66□□□□□ -1.02
SRP54-208ENST00000555557 ZNF81P51508 661 aa8.66□□□□□ -1.02
SRP54-208ENST00000555557 IL18Q14116 193 aa8.66□□□□□ -1.02
SRP54-208ENST00000555557 RSU1Q15404 277 aa8.66□□□□□ -1.02
SRP54-208ENST00000555557 MPPED2Q15777 294 aa8.66□□□□□ -1.02
SRP54-208ENST00000555557 MST1LQ2TV78 715 aa8.66□□□□□ -1.02
SRP54-208ENST00000555557 TRIM16LQ309B1 348 aa8.66□□□□□ -1.02
SRP54-208ENST00000555557 MOGAT2Q3SYC2 334 aa8.66□□□□□ -1.02
SRP54-208ENST00000555557 ZNF826PQ6ZT77 177 aa8.66□□□□□ -1.02
SRP54-208ENST00000555557 ZNF573Q86YE8 665 aa8.66□□□□□ -1.02
SRP54-208ENST00000555557 SCCPDHQ8NBX0 429 aa8.66□□□□□ -1.02
SRP54-208ENST00000555557 FAM222BQ8WU58 562 aa8.66□□□□□ -1.02
SRP54-208ENST00000555557 S100ZQ8WXG8 99 aa8.66□□□□□ -1.02
SRP54-208ENST00000555557 ELMOD3Q96FG2 381 aa8.66□□□□□ -1.02
SRP54-208ENST00000555557 CPNE2Q96FN4 548 aaPredicted RBP8.66□□□□□ -1.02
SRP54-208ENST00000555557 CYYR1Q96J86 154 aa8.66□□□□□ -1.02
SRP54-208ENST00000555557 NICN1Q9BSH3 213 aa8.66□□□□□ -1.02
SRP54-208ENST00000555557 SLC22A4Q9H015 551 aa8.66□□□□□ -1.02
SRP54-208ENST00000555557 METTL9Q9H1A3 318 aa8.66□□□□□ -1.02
SRP54-208ENST00000555557 ABCG5Q9H222 651 aa8.66□□□□□ -1.02
SRP54-208ENST00000555557 CXXC4Q9H2H0 198 aa8.66□□□□□ -1.02
SRP54-208ENST00000555557 HMG20AQ9NP66 347 aa8.66□□□□□ -1.02
SRP54-208ENST00000555557 UFSP2Q9NUQ7 469 aa8.66□□□□□ -1.02
SRP54-208ENST00000555557 MTCH1Q9NZJ7 389 aa8.66□□□□□ -1.02
SRP54-208ENST00000555557 ADAM30Q9UKF2 790 aa8.66□□□□□ -1.02
SRP54-208ENST00000555557 SETXQ7Z333 2677 aaKnown RBP8.66□□□□□ -1.02
SRP54-208ENST00000555557 A0A0G2JMP0 313 aa8.66□□□□□ -1.02
SRP54-208ENST00000555557 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.66□□□□□ -1.02
SRP54-208ENST00000555557 A0A0X1KG70 313 aa8.66□□□□□ -1.02
SRP54-208ENST00000555557 A0A1B0GWJ7 208 aa8.66□□□□□ -1.02
SRP54-208ENST00000555557 A1L4Q6 167 aa8.66□□□□□ -1.02
SRP54-208ENST00000555557 VSTM5A8MXK1 200 aa8.66□□□□□ -1.02
SRP54-208ENST00000555557 CDC14BO60729 498 aa8.66□□□□□ -1.02
SRP54-208ENST00000555557 IGHV1-46P01743 117 aa8.66□□□□□ -1.02
SRP54-208ENST00000555557 PTHLHP12272 177 aa8.66□□□□□ -1.02
SRP54-208ENST00000555557 BCL3P20749 454 aa8.66□□□□□ -1.02
SRP54-208ENST00000555557 CDK2P24941 298 aa8.66□□□□□ -1.02
SRP54-208ENST00000555557 ETV6P41212 452 aa8.66□□□□□ -1.02
SRP54-208ENST00000555557 SCAND1P57086 179 aa8.66□□□□□ -1.02
SRP54-208ENST00000555557 ARPC4P59998 168 aa8.66□□□□□ -1.02
SRP54-208ENST00000555557 GMFBP60983 142 aa8.66□□□□□ -1.02
SRP54-208ENST00000555557 ZNF79Q15937 498 aa8.66□□□□□ -1.02
SRP54-208ENST00000555557 ASCL4Q6XD76 172 aa8.66□□□□□ -1.02
SRP54-208ENST00000555557 C11orf53Q8IXP5 236 aa8.66□□□□□ -1.02
SRP54-208ENST00000555557 ACBD4Q8NC06 268 aa8.66□□□□□ -1.02
SRP54-208ENST00000555557 OR4M2Q8NGB6 313 aa8.66□□□□□ -1.02
SRP54-208ENST00000555557 KCNG3Q8TAE7 436 aa8.66□□□□□ -1.02
SRP54-208ENST00000555557 AQP3Q92482 292 aa8.66□□□□□ -1.02
SRP54-208ENST00000555557 S100A16Q96FQ6 103 aaKnown RBP8.66□□□□□ -1.02
SRP54-208ENST00000555557 NKIRAS2Q9NYR9 191 aa8.66□□□□□ -1.02
SRP54-208ENST00000555557 RAB22AQ9UL26 194 aa8.66□□□□□ -1.02
SRP54-208ENST00000555557 UBR5O95071 2799 aaPredicted RBP8.65□□□□□ -1.02
SRP54-208ENST00000555557 A0A0A6YYD4 124 aa8.65□□□□□ -1.02
SRP54-208ENST00000555557 LRP5LA4QPB2 252 aa8.65□□□□□ -1.02
SRP54-208ENST00000555557 A6NLC8 198 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms