RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 WBP4O75554 376 aaKnown RBP16.93■□□□□ 0.3
VTI1B-205ENST00000555543 TOX4O94842 621 aa16.93■□□□□ 0.3
VTI1B-205ENST00000555543 CLIC3O95833 236 aa16.93■□□□□ 0.3
VTI1B-205ENST00000555543 ECDO95905 644 aaPredicted RBP16.93■□□□□ 0.3
VTI1B-205ENST00000555543 LIPFP07098 398 aa16.93■□□□□ 0.3
VTI1B-205ENST00000555543 PGA5P0DJD9 388 aa16.93■□□□□ 0.3
VTI1B-205ENST00000555543 ZNF19P17023 458 aa16.93■□□□□ 0.3
VTI1B-205ENST00000555543 C11orf91Q3C1V1 193 aa16.93■□□□□ 0.3
VTI1B-205ENST00000555543 C9orf139Q6ZV77 190 aa16.93■□□□□ 0.3
VTI1B-205ENST00000555543 ANGPTL5Q86XS5 388 aa16.93■□□□□ 0.3
VTI1B-205ENST00000555543 CALHM1Q8IU99 346 aa16.93■□□□□ 0.3
VTI1B-205ENST00000555543 BATF2Q8N1L9 274 aa16.93■□□□□ 0.3
VTI1B-205ENST00000555543 LY6G5BQ8NDX9 201 aa16.93■□□□□ 0.3
VTI1B-205ENST00000555543 TMIGD2Q96BF3 282 aa16.93■□□□□ 0.3
VTI1B-205ENST00000555543 C1orf147Q96MC9 270 aaPredicted RBP16.93■□□□□ 0.3
VTI1B-205ENST00000555543 Q96MT0 163 aa16.93■□□□□ 0.3
VTI1B-205ENST00000555543 WDFY2Q96P53 400 aa16.93■□□□□ 0.3
VTI1B-205ENST00000555543 JMJD8Q96S16 334 aa16.93■□□□□ 0.3
VTI1B-205ENST00000555543 ADI1Q9BV57 179 aa16.93■□□□□ 0.3
VTI1B-205ENST00000555543 ALG8Q9BVK2 526 aa16.93■□□□□ 0.3
VTI1B-205ENST00000555543 CHST5Q9GZS9 411 aa16.93■□□□□ 0.3
VTI1B-205ENST00000555543 IGKV1-27A0A075B6S5 117 aa16.92■□□□□ 0.3
VTI1B-205ENST00000555543 ACAA1P09110 424 aaPredicted RBP16.92■□□□□ 0.3
VTI1B-205ENST00000555543 MPZP25189 248 aa16.92■□□□□ 0.3
VTI1B-205ENST00000555543 GABRA2P47869 451 aa16.92■□□□□ 0.3
VTI1B-205ENST00000555543 ARF6P62330 175 aa16.92■□□□□ 0.3
VTI1B-205ENST00000555543 ACTA2P62736 377 aa16.92■□□□□ 0.3
VTI1B-205ENST00000555543 ACTG2P63267 376 aa16.92■□□□□ 0.3
VTI1B-205ENST00000555543 IL13RA1P78552 427 aa16.92■□□□□ 0.3
VTI1B-205ENST00000555543 GALEQ14376 348 aa16.92■□□□□ 0.3
VTI1B-205ENST00000555543 LRRC10Q5BKY1 277 aa16.92■□□□□ 0.3
VTI1B-205ENST00000555543 RUSC1-AS1Q66K80 236 aa16.92■□□□□ 0.3
VTI1B-205ENST00000555543 ACP7Q6ZNF0 438 aa16.92■□□□□ 0.3
VTI1B-205ENST00000555543 ZNF555Q8NEP9 628 aa16.92■□□□□ 0.3
VTI1B-205ENST00000555543 OR52I1Q8NGK6 324 aa16.92■□□□□ 0.3
VTI1B-205ENST00000555543 OR10AC1Q8NH08 325 aa16.92■□□□□ 0.3
VTI1B-205ENST00000555543 ADAT3Q96EY9 351 aaPredicted RBP16.92■□□□□ 0.3
VTI1B-205ENST00000555543 ISG20L2Q9H9L3 353 aaKnown RBP16.92■□□□□ 0.3
VTI1B-205ENST00000555543 ERVK13-1Q9NX77 482 aa16.92■□□□□ 0.3
VTI1B-205ENST00000555543 MAB21L2Q9Y586 359 aa16.92■□□□□ 0.3
VTI1B-205ENST00000555543 MDFIC2A0A1B0GVS7 189 aa16.91■□□□□ 0.3
VTI1B-205ENST00000555543 FAM230AA0A1W2PPH8 454 aa16.91■□□□□ 0.3
VTI1B-205ENST00000555543 DNAJC9-AS1A6NH13 148 aa16.91■□□□□ 0.3
VTI1B-205ENST00000555543 TRIM77I1YAP6 450 aa16.91■□□□□ 0.3
VTI1B-205ENST00000555543 FADS2O95864 444 aaKnown RBP16.91■□□□□ 0.3
VTI1B-205ENST00000555543 HTR1AP08908 422 aa16.91■□□□□ 0.3
VTI1B-205ENST00000555543 UBA52P62987 128 aaKnown RBP16.91■□□□□ 0.3
VTI1B-205ENST00000555543 RAB40BQ12829 278 aa16.91■□□□□ 0.3
VTI1B-205ENST00000555543 METTL11BQ5VVY1 283 aa16.91■□□□□ 0.3
VTI1B-205ENST00000555543 ZNRF1Q8ND25 227 aa16.91■□□□□ 0.3
VTI1B-205ENST00000555543 CCDC54Q8NEL0 328 aa16.91■□□□□ 0.3
VTI1B-205ENST00000555543 OR51A4Q8NGJ6 313 aa16.91■□□□□ 0.3
VTI1B-205ENST00000555543 FAM216AQ8WUB2 273 aa16.91■□□□□ 0.3
VTI1B-205ENST00000555543 MED30Q96HR3 178 aa16.91■□□□□ 0.3
VTI1B-205ENST00000555543 DUX5Q96PT3 197 aa16.91■□□□□ 0.3
VTI1B-205ENST00000555543 NRIP2Q9BQI9 281 aa16.91■□□□□ 0.3
VTI1B-205ENST00000555543 DCTN5Q9BTE1 182 aa16.91■□□□□ 0.3
VTI1B-205ENST00000555543 ELL3Q9HB65 397 aaPredicted RBP16.91■□□□□ 0.3
VTI1B-205ENST00000555543 MRPS18AQ9NVS2 196 aaKnown RBP16.91■□□□□ 0.3
VTI1B-205ENST00000555543 SLC25A10Q9UBX3 287 aaPredicted RBP16.91■□□□□ 0.3
VTI1B-205ENST00000555543 CENPVL3A0A0U1RRI6 287 aa16.9■□□□□ 0.3
VTI1B-205ENST00000555543 OR4C45A6NMZ5 311 aa16.9■□□□□ 0.3
VTI1B-205ENST00000555543 NOS1APO75052 506 aaPredicted RBP16.9■□□□□ 0.3
VTI1B-205ENST00000555543 ISG15P05161 165 aa16.9■□□□□ 0.3
VTI1B-205ENST00000555543 CEBPDP49716 269 aaPredicted RBP16.9■□□□□ 0.3
VTI1B-205ENST00000555543 CCR9P51686 369 aa16.9■□□□□ 0.3
VTI1B-205ENST00000555543 SMIM21Q3B7S5 101 aa16.9■□□□□ 0.3
VTI1B-205ENST00000555543 GPR157Q5UAW9 335 aa16.9■□□□□ 0.3
VTI1B-205ENST00000555543 ZNF691Q5VV52 312 aa16.9■□□□□ 0.3
VTI1B-205ENST00000555543 TMEM244Q5VVB8 128 aa16.9■□□□□ 0.3
VTI1B-205ENST00000555543 SYS1Q8N2H4 156 aa16.9■□□□□ 0.3
VTI1B-205ENST00000555543 CD177Q8N6Q3 437 aa16.9■□□□□ 0.3
VTI1B-205ENST00000555543 CNIH3Q8TBE1 160 aa16.9■□□□□ 0.3
VTI1B-205ENST00000555543 CYGBQ8WWM9 190 aa16.9■□□□□ 0.3
VTI1B-205ENST00000555543 H1FXQ92522 213 aaKnown RBP16.9■□□□□ 0.3
VTI1B-205ENST00000555543 C10orf35Q96D05 121 aa16.9■□□□□ 0.3
VTI1B-205ENST00000555543 SDSLQ96GA7 329 aa16.9■□□□□ 0.3
VTI1B-205ENST00000555543 CNTD2Q9H8S5 307 aa16.9■□□□□ 0.3
VTI1B-205ENST00000555543 HES4Q9HCC6 221 aa16.9■□□□□ 0.3
VTI1B-205ENST00000555543 RASL12Q9NYN1 266 aa16.9■□□□□ 0.3
VTI1B-205ENST00000555543 ONECUT1Q9UBC0 465 aa16.9■□□□□ 0.3
VTI1B-205ENST00000555543 SLC7A11Q9UPY5 501 aa16.9■□□□□ 0.3
VTI1B-205ENST00000555543 POLDIP2Q9Y2S7 368 aa16.9■□□□□ 0.3
VTI1B-205ENST00000555543 RPL36Q9Y3U8 105 aaKnown RBP16.9■□□□□ 0.3
VTI1B-205ENST00000555543 IGKV1-9A0A0C4DH69 117 aa16.89■□□□□ 0.29
VTI1B-205ENST00000555543 RFPL4AA6NLU0 287 aa16.89■□□□□ 0.29
VTI1B-205ENST00000555543 E9PI62 339 aa16.89■□□□□ 0.29
VTI1B-205ENST00000555543 RFPL4AL1F8VTS6 287 aa16.89■□□□□ 0.29
VTI1B-205ENST00000555543 GPR37O15354 613 aa16.89■□□□□ 0.29
VTI1B-205ENST00000555543 GATBO75879 557 aaKnown RBP16.89■□□□□ 0.29
VTI1B-205ENST00000555543 CAV3P56539 151 aa16.89■□□□□ 0.29
VTI1B-205ENST00000555543 ERVK11-1P61568 191 aa16.89■□□□□ 0.29
VTI1B-205ENST00000555543 ALKBH1Q13686 389 aaKnown RBP16.89■□□□□ 0.29
VTI1B-205ENST00000555543 RBMS3Q6XE24 437 aaKnown RBP16.89■□□□□ 0.29
VTI1B-205ENST00000555543 PACRGLQ8N7B6 248 aa16.89■□□□□ 0.29
VTI1B-205ENST00000555543 C8orf46Q8TAG6 207 aa16.89■□□□□ 0.29
VTI1B-205ENST00000555543 PP6455Q8WZ26 134 aa16.89■□□□□ 0.29
VTI1B-205ENST00000555543 PKIBQ9C010 78 aa16.89■□□□□ 0.29
VTI1B-205ENST00000555543 INPP5EQ9NRR6 644 aa16.89■□□□□ 0.29
VTI1B-205ENST00000555543 KPTNQ9Y664 436 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms