RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 HCKP08631 526 aa10.65□□□□□ -0.7
SYNE2-219ENST00000555323 PGA5P0DJD9 388 aa10.65□□□□□ -0.7
SYNE2-219ENST00000555323 PPIAL4FP0DN26 164 aa10.65□□□□□ -0.7
SYNE2-219ENST00000555323 ADRA2CP18825 462 aa10.65□□□□□ -0.7
SYNE2-219ENST00000555323 ZNF93P35789 620 aaPredicted RBP10.65□□□□□ -0.7
SYNE2-219ENST00000555323 RBMXP38159 391 aaKnown RBP10.65□□□□□ -0.7
SYNE2-219ENST00000555323 GPR6P46095 362 aaPredicted RBP10.65□□□□□ -0.7
SYNE2-219ENST00000555323 ERVK11-1P61568 191 aa10.65□□□□□ -0.7
SYNE2-219ENST00000555323 PDZK1IP1Q13113 114 aa10.65□□□□□ -0.7
SYNE2-219ENST00000555323 TIMM50Q3ZCQ8 353 aa10.65□□□□□ -0.7
SYNE2-219ENST00000555323 TEX36Q5VZQ5 186 aa10.65□□□□□ -0.7
SYNE2-219ENST00000555323 SPNS3Q6ZMD2 512 aa10.65□□□□□ -0.7
SYNE2-219ENST00000555323 PEG10Q86TG7 708 aaKnown RBP10.65□□□□□ -0.7
SYNE2-219ENST00000555323 MKXQ8IYA7 352 aa10.65□□□□□ -0.7
SYNE2-219ENST00000555323 NKAIN3Q8N8D7 197 aa10.65□□□□□ -0.7
SYNE2-219ENST00000555323 POC1AQ8NBT0 407 aa10.65□□□□□ -0.7
SYNE2-219ENST00000555323 WFDC11Q8NEX6 87 aa10.65□□□□□ -0.7
SYNE2-219ENST00000555323 PXT1Q8NFP0 134 aa10.65□□□□□ -0.7
SYNE2-219ENST00000555323 TMIGD2Q96BF3 282 aa10.65□□□□□ -0.7
SYNE2-219ENST00000555323 TIMD4Q96H15 378 aa10.65□□□□□ -0.7
SYNE2-219ENST00000555323 PIMREGQ9BSJ6 248 aa10.65□□□□□ -0.7
SYNE2-219ENST00000555323 BPESC1Q9GZL8 116 aa10.65□□□□□ -0.7
SYNE2-219ENST00000555323 OR51E2Q9H255 320 aa10.65□□□□□ -0.7
SYNE2-219ENST00000555323 METTL17Q9H7H0 456 aaPredicted RBP10.65□□□□□ -0.7
SYNE2-219ENST00000555323 RHOFQ9HBH0 211 aa10.65□□□□□ -0.7
SYNE2-219ENST00000555323 TMEM165Q9HC07 324 aa10.65□□□□□ -0.7
SYNE2-219ENST00000555323 RASL12Q9NYN1 266 aa10.65□□□□□ -0.7
SYNE2-219ENST00000555323 MTCH1Q9NZJ7 389 aa10.65□□□□□ -0.7
SYNE2-219ENST00000555323 ITGB1BP2Q9UKP3 347 aa10.65□□□□□ -0.7
SYNE2-219ENST00000555323 GSTK1Q9Y2Q3 226 aa10.65□□□□□ -0.7
SYNE2-219ENST00000555323 PPIAL4AQ9Y536 164 aa10.65□□□□□ -0.7
SYNE2-219ENST00000555323 A0A096LNT2 108 aa10.64□□□□□ -0.71
SYNE2-219ENST00000555323 hCG_1807616A0A1W2PRN6 198 aa10.64□□□□□ -0.71
SYNE2-219ENST00000555323 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.64□□□□□ -0.71
SYNE2-219ENST00000555323 PPIHO43447 177 aaKnown RBP10.64□□□□□ -0.71
SYNE2-219ENST00000555323 SYNGR1O43759 233 aa10.64□□□□□ -0.71
SYNE2-219ENST00000555323 MAS1P04201 325 aa10.64□□□□□ -0.71
SYNE2-219ENST00000555323 MUC1P15941 1255 aaPredicted RBP10.64□□□□□ -0.71
SYNE2-219ENST00000555323 CPT2P23786 658 aa10.64□□□□□ -0.71
SYNE2-219ENST00000555323 GADD45AP24522 165 aa10.64□□□□□ -0.71
SYNE2-219ENST00000555323 CALRP27797 417 aaKnown RBP10.64□□□□□ -0.71
SYNE2-219ENST00000555323 RPL5P46777 297 aaKnown RBP10.64□□□□□ -0.71
SYNE2-219ENST00000555323 PSMD7P51665 324 aa10.64□□□□□ -0.71
SYNE2-219ENST00000555323 BTG1P62324 171 aa10.64□□□□□ -0.71
SYNE2-219ENST00000555323 HNRNPA0Q13151 305 aaKnown RBP10.64□□□□□ -0.71
SYNE2-219ENST00000555323 CARTPTQ16568 116 aa10.64□□□□□ -0.71
SYNE2-219ENST00000555323 TMEM155Q4W5P6 130 aa10.64□□□□□ -0.71
SYNE2-219ENST00000555323 DDI2Q5TDH0 399 aa10.64□□□□□ -0.71
SYNE2-219ENST00000555323 C22orf42Q6IC83 251 aa10.64□□□□□ -0.71
SYNE2-219ENST00000555323 SLC25A26Q70HW3 274 aa10.64□□□□□ -0.71
SYNE2-219ENST00000555323 Q8NFD4 153 aa10.64□□□□□ -0.71
SYNE2-219ENST00000555323 LRRC29Q8WV35 223 aa10.64□□□□□ -0.71
SYNE2-219ENST00000555323 C12orf43Q96C57 262 aaKnown RBP10.64□□□□□ -0.71
SYNE2-219ENST00000555323 FOXRED1Q96CU9 486 aaPredicted RBP10.64□□□□□ -0.71
SYNE2-219ENST00000555323 Q96MF0 132 aa10.64□□□□□ -0.71
SYNE2-219ENST00000555323 SPACA5Q96QH8 159 aa10.64□□□□□ -0.71
SYNE2-219ENST00000555323 NRIP2Q9BQI9 281 aa10.64□□□□□ -0.71
SYNE2-219ENST00000555323 UQCC2Q9BRT2 126 aa10.64□□□□□ -0.71
SYNE2-219ENST00000555323 SLITRK2Q9H156 845 aa10.64□□□□□ -0.71
SYNE2-219ENST00000555323 HES4Q9HCC6 221 aa10.64□□□□□ -0.71
SYNE2-219ENST00000555323 SCOCQ9UIL1 159 aa10.64□□□□□ -0.71
SYNE2-219ENST00000555323 TANC2Q9HCD6 1990 aa10.64□□□□□ -0.71
SYNE2-219ENST00000555323 IGKV1-12A0A0C4DH73 117 aa10.63□□□□□ -0.71
SYNE2-219ENST00000555323 SHISA3A0PJX4 238 aa10.63□□□□□ -0.71
SYNE2-219ENST00000555323 OOEPA6NGQ2 149 aa10.63□□□□□ -0.71
SYNE2-219ENST00000555323 LGALS8O00214 317 aa10.63□□□□□ -0.71
SYNE2-219ENST00000555323 AKR7A2O43488 359 aa10.63□□□□□ -0.71
SYNE2-219ENST00000555323 NDUFA2O43678 99 aa10.63□□□□□ -0.71
SYNE2-219ENST00000555323 KDM4BO94953 1096 aa10.63□□□□□ -0.71
SYNE2-219ENST00000555323 IGKV1D-12P01611 117 aa10.63□□□□□ -0.71
SYNE2-219ENST00000555323 EGR1P18146 543 aa10.63□□□□□ -0.71
SYNE2-219ENST00000555323 MDH2P40926 338 aaKnown RBP10.63□□□□□ -0.71
SYNE2-219ENST00000555323 PTGFRP43088 359 aa10.63□□□□□ -0.71
SYNE2-219ENST00000555323 LOXL1Q08397 574 aaPredicted RBP10.63□□□□□ -0.71
SYNE2-219ENST00000555323 ZMYND11Q15326 602 aa10.63□□□□□ -0.71
SYNE2-219ENST00000555323 ZNF404Q494X3 552 aa10.63□□□□□ -0.71
SYNE2-219ENST00000555323 C1orf100Q5SVJ3 147 aa10.63□□□□□ -0.71
SYNE2-219ENST00000555323 FAM201AQ5SY85 155 aa10.63□□□□□ -0.71
SYNE2-219ENST00000555323 GLT8D1Q68CQ7 371 aa10.63□□□□□ -0.71
SYNE2-219ENST00000555323 SATL1Q86VE3 508 aa10.63□□□□□ -0.71
SYNE2-219ENST00000555323 FAM90A1Q86YD7 464 aa10.63□□□□□ -0.71
SYNE2-219ENST00000555323 ANKRD13BQ86YJ7 626 aa10.63□□□□□ -0.71
SYNE2-219ENST00000555323 OR51F2Q8NH61 342 aa10.63□□□□□ -0.71
SYNE2-219ENST00000555323 FUNDC2Q9BWH2 189 aa10.63□□□□□ -0.71
SYNE2-219ENST00000555323 REG4Q9BYZ8 158 aa10.63□□□□□ -0.71
SYNE2-219ENST00000555323 SEBOXQ9HB31 216 aaPredicted RBP10.63□□□□□ -0.71
SYNE2-219ENST00000555323 TRAV38-1A0A0B4J264 116 aa10.62□□□□□ -0.71
SYNE2-219ENST00000555323 SPRY1O43609 319 aaPredicted RBP10.62□□□□□ -0.71
SYNE2-219ENST00000555323 AIREO43918 545 aa10.62□□□□□ -0.71
SYNE2-219ENST00000555323 CYB5AP00167 134 aa10.62□□□□□ -0.71
SYNE2-219ENST00000555323 USF1P22415 310 aaPredicted RBP10.62□□□□□ -0.71
SYNE2-219ENST00000555323 GLRA1P23415 457 aa10.62□□□□□ -0.71
SYNE2-219ENST00000555323 CFPP27918 469 aa10.62□□□□□ -0.71
SYNE2-219ENST00000555323 MTNR1BP49286 362 aa10.62□□□□□ -0.71
SYNE2-219ENST00000555323 HOXA4Q00056 320 aaPredicted RBP10.62□□□□□ -0.71
SYNE2-219ENST00000555323 KCNJ8Q15842 424 aa10.62□□□□□ -0.71
SYNE2-219ENST00000555323 AVPI1Q5T686 147 aa10.62□□□□□ -0.71
SYNE2-219ENST00000555323 ATPAF1Q5TC12 328 aaPredicted RBP10.62□□□□□ -0.71
SYNE2-219ENST00000555323 SFRP4Q6FHJ7 346 aaPredicted RBP10.62□□□□□ -0.71
SYNE2-219ENST00000555323 ELP2Q6IA86 826 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms